RNA–Protein interactions for RNA: ENST00000235372.11

PRDM2-201, Transcript of PR/SET domain 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PRDM2, Length 7,957 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-201ENST00000235372 ZRSR2Q15696 482 aaKnown RBP9.29□□□□□ -0.92
PRDM2-201ENST00000235372 TRIM29Q14134 588 aa9.29□□□□□ -0.92
PRDM2-201ENST00000235372 DEKP35659 375 aaKnown RBP9.29□□□□□ -0.92
PRDM2-201ENST00000235372 TEX35Q5T0J7 233 aa9.29□□□□□ -0.92
PRDM2-201ENST00000235372 FBXW7Q969H0 707 aa9.29□□□□□ -0.92
PRDM2-201ENST00000235372 DHX16O60231 1041 aaKnown RBP9.28□□□□□ -0.92
PRDM2-201ENST00000235372 HSP90AB2PQ58FF8 381 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 DHX37Q8IY37 1157 aaKnown RBP9.28□□□□□ -0.92
PRDM2-201ENST00000235372 MIER1Q8N108 512 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 GOLGA6L3A6NEY3 463 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 ZFYVE27Q5T4F4 411 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 MAP7D2Q96T17 732 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 ST18O60284 1047 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 BECN2A8MW95 431 aa9.28□□□□□ -0.92
PRDM2-201ENST00000235372 APPP05067 770 aa9.27□□□□□ -0.92
PRDM2-201ENST00000235372 STK26Q9P289 416 aa9.27□□□□□ -0.93
PRDM2-201ENST00000235372 VPS37DQ86XT2 251 aa9.27□□□□□ -0.93
PRDM2-201ENST00000235372 KLHL34Q8N239 644 aa9.27□□□□□ -0.93
PRDM2-201ENST00000235372 EPS15P42566 896 aa9.27□□□□□ -0.93
PRDM2-201ENST00000235372 NAP1L1P55209 391 aaKnown RBP9.27□□□□□ -0.93
PRDM2-201ENST00000235372 CCDC191Q8NCU4 936 aa9.27□□□□□ -0.93
PRDM2-201ENST00000235372 EVA1CP58658 441 aa9.27□□□□□ -0.93
PRDM2-201ENST00000235372 PHF23Q9BUL5 403 aaPredicted RBP9.26□□□□□ -0.93
PRDM2-201ENST00000235372 DCTN1Q14203 1278 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 NOL8Q76FK4 1167 aaKnown RBP9.26□□□□□ -0.93
PRDM2-201ENST00000235372 PMFBP1Q8TBY8 1022 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 MYO6Q9UM54 1294 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 RB1CC1Q8TDY2 1594 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 CCDC173Q0VFZ6 552 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 CPLX2Q6PUV4 134 aaKnown RBP9.26□□□□□ -0.93
PRDM2-201ENST00000235372 CCAR1Q8IX12 1150 aaKnown RBP9.26□□□□□ -0.93
PRDM2-201ENST00000235372 TMEM132AQ24JP5 1023 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 SLC4A10Q6U841 1118 aa9.26□□□□□ -0.93
PRDM2-201ENST00000235372 NOM1Q5C9Z4 860 aaKnown RBP9.25□□□□□ -0.93
PRDM2-201ENST00000235372 ATP6V1DQ9Y5K8 247 aa9.25□□□□□ -0.93
PRDM2-201ENST00000235372 ZNF771Q7L3S4 317 aaPredicted RBP9.25□□□□□ -0.93
PRDM2-201ENST00000235372 VSIG10Q8N0Z9 540 aa9.24□□□□□ -0.93
PRDM2-201ENST00000235372 AEBP2Q6ZN18 517 aaPredicted RBP9.24□□□□□ -0.93
PRDM2-201ENST00000235372 MCTP1Q6DN14 999 aa9.24□□□□□ -0.93
PRDM2-201ENST00000235372 MFAP1P55081 439 aaKnown RBP9.24□□□□□ -0.93
PRDM2-201ENST00000235372 ACBD3Q9H3P7 528 aa9.24□□□□□ -0.93
PRDM2-201ENST00000235372 FOXD4L1Q9NU39 408 aa9.23□□□□□ -0.93
PRDM2-201ENST00000235372 SLKQ9H2G2 1235 aaPredicted RBP9.23□□□□□ -0.93
PRDM2-201ENST00000235372 EID1Q9Y6B2 187 aa9.23□□□□□ -0.93
PRDM2-201ENST00000235372 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.23□□□□□ -0.93
PRDM2-201ENST00000235372 U2AF1L5P0DN76 240 aaPredicted RBP9.23□□□□□ -0.93
PRDM2-201ENST00000235372 U2AF1Q01081 240 aaKnown RBP eCLIP9.23□□□□□ -0.93
PRDM2-201ENST00000235372 CCDC97Q96F63 343 aaPredicted RBP9.23□□□□□ -0.93
PRDM2-201ENST00000235372 ERICH2A1L162 156 aa9.23□□□□□ -0.93
PRDM2-201ENST00000235372 SAMD1Q6SPF0 538 aaPredicted RBP9.23□□□□□ -0.93
PRDM2-201ENST00000235372 FOXD4L5Q5VV16 416 aaPredicted RBP9.22□□□□□ -0.93
PRDM2-201ENST00000235372 FOXD4L4Q8WXT5 416 aaPredicted RBP9.22□□□□□ -0.93
PRDM2-201ENST00000235372 LMOD3Q0VAK6 560 aa9.22□□□□□ -0.93
PRDM2-201ENST00000235372 AMPHP49418 695 aa9.22□□□□□ -0.93
PRDM2-201ENST00000235372 DCAF11Q8TEB1 546 aa9.22□□□□□ -0.93
PRDM2-201ENST00000235372 ZCCHC6Q5VYS8 1495 aaKnown RBP9.22□□□□□ -0.93
PRDM2-201ENST00000235372 ZNF592Q92610 1267 aa9.22□□□□□ -0.93
PRDM2-201ENST00000235372 HOMER1Q86YM7 354 aa9.21□□□□□ -0.93
PRDM2-201ENST00000235372 ANKRD18AQ8IVF6 992 aa9.21□□□□□ -0.94
PRDM2-201ENST00000235372 SMC4Q9NTJ3 1288 aa9.21□□□□□ -0.94
PRDM2-201ENST00000235372 NEXNQ0ZGT2 675 aa9.21□□□□□ -0.94
PRDM2-201ENST00000235372 NGDNQ8NEJ9 315 aaKnown RBP9.21□□□□□ -0.94
PRDM2-201ENST00000235372 CLIP1P30622 1438 aa9.2□□□□□ -0.94
PRDM2-201ENST00000235372 C1orf141Q5JVX7 400 aa9.2□□□□□ -0.94
PRDM2-201ENST00000235372 KTN1Q86UP2 1357 aaKnown RBP9.2□□□□□ -0.94
PRDM2-201ENST00000235372 TIMELESSQ9UNS1 1208 aa9.2□□□□□ -0.94
PRDM2-201ENST00000235372 OFD1O75665 1012 aa9.2□□□□□ -0.94
PRDM2-201ENST00000235372 TRDNQ13061 729 aa9.2□□□□□ -0.94
PRDM2-201ENST00000235372 RBM33Q96EV2 1170 aaKnown RBP9.19□□□□□ -0.94
PRDM2-201ENST00000235372 PLCD4Q9BRC7 762 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 PRDM2Q13029 1718 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 WASHC2AQ641Q2 1341 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 PPM1FP49593 454 aaPredicted RBP9.19□□□□□ -0.94
PRDM2-201ENST00000235372 NFXL1Q6ZNB6 911 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 DDX11L8A8MPP1 907 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 CPLX1O14810 134 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 RILPL2Q969X0 211 aa9.19□□□□□ -0.94
PRDM2-201ENST00000235372 EIF3AQ14152 1382 aaKnown RBP9.19□□□□□ -0.94
PRDM2-201ENST00000235372 NEFHP12036 1026 aa9.18□□□□□ -0.94
PRDM2-201ENST00000235372 HSP90AA2PQ14568 343 aaPredicted RBP9.18□□□□□ -0.94
PRDM2-201ENST00000235372 SYCP1Q15431 976 aa9.18□□□□□ -0.94
PRDM2-201ENST00000235372 SEPT7Q16181 437 aaKnown RBP9.17□□□□□ -0.94
PRDM2-201ENST00000235372 LTV1Q96GA3 475 aaPredicted RBP9.17□□□□□ -0.94
PRDM2-201ENST00000235372 HSP90B2PQ58FF3 399 aa9.17□□□□□ -0.94
PRDM2-201ENST00000235372 FOXD4L6Q3SYB3 417 aaPredicted RBP9.17□□□□□ -0.94
PRDM2-201ENST00000235372 FOXD4L3Q6VB84 417 aaPredicted RBP9.17□□□□□ -0.94
PRDM2-201ENST00000235372 BRMS1Q9HCU9 246 aa9.17□□□□□ -0.94
PRDM2-201ENST00000235372 TERF2IPQ9NYB0 399 aa9.17□□□□□ -0.94
PRDM2-201ENST00000235372 IKQ13123 557 aaPredicted RBP9.17□□□□□ -0.94
PRDM2-201ENST00000235372 GGT6Q6P531 493 aa9.17□□□□□ -0.94
PRDM2-201ENST00000235372 SEPT11Q9NVA2 429 aaKnown RBP9.17□□□□□ -0.94
PRDM2-201ENST00000235372 TTC5Q8N0Z6 440 aa9.16□□□□□ -0.94
PRDM2-201ENST00000235372 CAGE1Q8TC20 777 aa9.16□□□□□ -0.94
PRDM2-201ENST00000235372 RUFY2Q8WXA3 655 aa9.16□□□□□ -0.94
PRDM2-201ENST00000235372 SAFBQ15424 915 aaKnown RBP eCLIP9.16□□□□□ -0.94
PRDM2-201ENST00000235372 ARGLU1Q9NWB6 273 aaPredicted RBP9.16□□□□□ -0.94
PRDM2-201ENST00000235372 ANKRD62A6NC57 917 aa9.16□□□□□ -0.94
PRDM2-201ENST00000235372 H0YHG0 523 aa9.16□□□□□ -0.94
PRDM2-201ENST00000235372 DIAPH3Q9NSV4 1193 aa9.16□□□□□ -0.94
PRDM2-201ENST00000235372 FOXD1Q16676 465 aa9.15□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms