RNA–Protein interactions for RNA: ENST00000215917.11

SRRD-201, Transcript of SRR1 domain containing, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRRD, Length 4,020 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRD-201ENST00000215917 RSPH4AQ5TD94 716 aa20.21■□□□□ 0.83
SRRD-201ENST00000215917 CLASP1Q7Z460 1538 aa20.21■□□□□ 0.83
SRRD-201ENST00000215917 TEX14Q8IWB6 1497 aa20.2■□□□□ 0.82
SRRD-201ENST00000215917 OSCARQ8IYS5 282 aa20.19■□□□□ 0.82
SRRD-201ENST00000215917 SHANK2Q9UPX8 1470 aa20.18■□□□□ 0.82
SRRD-201ENST00000215917 KIF7Q2M1P5 1343 aa20.18■□□□□ 0.82
SRRD-201ENST00000215917 CARD11Q9BXL7 1154 aa20.18■□□□□ 0.82
SRRD-201ENST00000215917 PREX2Q70Z35 1606 aa20.17■□□□□ 0.82
SRRD-201ENST00000215917 CCDC7Q96M83 1385 aa20.17■□□□□ 0.82
SRRD-201ENST00000215917 PRKRIP1Q9H875 184 aaPredicted RBP20.17■□□□□ 0.82
SRRD-201ENST00000215917 ZCCHC11Q5TAX3 1644 aaKnown RBP20.15■□□□□ 0.82
SRRD-201ENST00000215917 PLEKHH2Q8IVE3 1493 aa20.15■□□□□ 0.82
SRRD-201ENST00000215917 ARHGEF12Q9NZN5 1544 aa20.15■□□□□ 0.82
SRRD-201ENST00000215917 SPAG9O60271 1321 aaKnown RBP20.14■□□□□ 0.81
SRRD-201ENST00000215917 TRAPPC8Q9Y2L5 1435 aa20.13■□□□□ 0.81
SRRD-201ENST00000215917 NPM1P06748 294 aaKnown RBP eCLIP20.13■□□□□ 0.81
SRRD-201ENST00000215917 PLCH2O75038 1416 aa20.13■□□□□ 0.81
SRRD-201ENST00000215917 ARHGEF5Q12774 1597 aa20.11■□□□□ 0.81
SRRD-201ENST00000215917 CNTLNQ9NXG0 1405 aa20.1■□□□□ 0.81
SRRD-201ENST00000215917 USP47Q96K76 1375 aa20.09■□□□□ 0.81
SRRD-201ENST00000215917 MYO5CQ9NQX4 1742 aa20.08■□□□□ 0.8
SRRD-201ENST00000215917 FAM135AQ9P2D6 1515 aa20.07■□□□□ 0.8
SRRD-201ENST00000215917 ST20-MTHFSA0A0A6YYL1 179 aa20.06■□□□□ 0.8
SRRD-201ENST00000215917 CCDC144AA2RUR9 1427 aa20.06■□□□□ 0.8
SRRD-201ENST00000215917 UHRF1BP1LA0JNW5 1464 aa20.05■□□□□ 0.8
SRRD-201ENST00000215917 NOP58Q9Y2X3 529 aaKnown RBP20.05■□□□□ 0.8
SRRD-201ENST00000215917 TMC1Q8TDI8 760 aa20.04■□□□□ 0.8
SRRD-201ENST00000215917 KIF3BO15066 747 aa20.03■□□□□ 0.8
SRRD-201ENST00000215917 NBPF1Q3BBV0 1214 aa20.02■□□□□ 0.8
SRRD-201ENST00000215917 WDR7Q9Y4E6 1490 aa20.02■□□□□ 0.8
SRRD-201ENST00000215917 ASXL2Q76L83 1435 aa20.02■□□□□ 0.79
SRRD-201ENST00000215917 NEFMP07197 916 aa20.01■□□□□ 0.79
SRRD-201ENST00000215917 SCAPERQ9BY12 1400 aa20.01■□□□□ 0.79
SRRD-201ENST00000215917 ROCK2O75116 1388 aaKnown RBP20■□□□□ 0.79
SRRD-201ENST00000215917 SPATA31E1Q6ZUB1 1445 aa20■□□□□ 0.79
SRRD-201ENST00000215917 FANCAO15360 1455 aa19.99■□□□□ 0.79
SRRD-201ENST00000215917 CYB5RLQ6IPT4 315 aa19.96■□□□□ 0.79
SRRD-201ENST00000215917 ABCC1P33527 1531 aa19.95■□□□□ 0.78
SRRD-201ENST00000215917 PLA2R1Q13018 1463 aa19.95■□□□□ 0.78
SRRD-201ENST00000215917 KDM5DQ9BY66 1539 aa19.95■□□□□ 0.78
SRRD-201ENST00000215917 PPP4R2Q9NY27 417 aa19.94■□□□□ 0.78
SRRD-201ENST00000215917 DUOX2Q9NRD8 1548 aa19.94■□□□□ 0.78
SRRD-201ENST00000215917 ADGRL1O94910 1474 aa19.93■□□□□ 0.78
SRRD-201ENST00000215917 ANO8Q9HCE9 1232 aaPredicted RBP19.92■□□□□ 0.78
SRRD-201ENST00000215917 CC2D1BQ5T0F9 858 aaKnown RBP19.9■□□□□ 0.78
SRRD-201ENST00000215917 GGT6Q6P531 493 aa19.9■□□□□ 0.78
SRRD-201ENST00000215917 MAST1Q9Y2H9 1570 aa19.89■□□□□ 0.78
SRRD-201ENST00000215917 ERBINQ96RT1 1412 aa19.89■□□□□ 0.77
SRRD-201ENST00000215917 CHGAP10645 457 aaKnown RBP19.89■□□□□ 0.77
SRRD-201ENST00000215917 RAPGEF3O95398 923 aa19.87■□□□□ 0.77
SRRD-201ENST00000215917 SENP3Q9H4L4 574 aaPredicted RBP19.87■□□□□ 0.77
SRRD-201ENST00000215917 RALGAPBQ86X10 1494 aa19.87■□□□□ 0.77
SRRD-201ENST00000215917 UHRF1BP1Q6BDS2 1440 aa19.87■□□□□ 0.77
SRRD-201ENST00000215917 PLXNC1O60486 1568 aa19.86■□□□□ 0.77
SRRD-201ENST00000215917 ARID4BQ4LE39 1312 aaPredicted RBP19.85■□□□□ 0.77
SRRD-201ENST00000215917 BCORL1Q5H9F3 1711 aa19.85■□□□□ 0.77
SRRD-201ENST00000215917 ZBED9Q6R2W3 1325 aa19.85■□□□□ 0.77
SRRD-201ENST00000215917 CANXP27824 592 aaKnown RBP19.85■□□□□ 0.77
SRRD-201ENST00000215917 A2MP01023 1474 aa19.84■□□□□ 0.77
SRRD-201ENST00000215917 CD109Q6YHK3 1445 aa19.84■□□□□ 0.77
SRRD-201ENST00000215917 PRAG1Q86YV5 1406 aa19.83■□□□□ 0.77
SRRD-201ENST00000215917 UNC13BO14795 1591 aa19.83■□□□□ 0.77
SRRD-201ENST00000215917 KANK1Q14678 1352 aa19.83■□□□□ 0.76
SRRD-201ENST00000215917 ZFYVE16Q7Z3T8 1539 aa19.82■□□□□ 0.76
SRRD-201ENST00000215917 KDM5CP41229 1560 aa19.81■□□□□ 0.76
SRRD-201ENST00000215917 ATP7AQ04656 1500 aa19.8■□□□□ 0.76
SRRD-201ENST00000215917 RTEL1-TNFRSF6BF6WH68 1400 aa19.79■□□□□ 0.76
SRRD-201ENST00000215917 IQGAP3Q86VI3 1631 aa19.79■□□□□ 0.76
SRRD-201ENST00000215917 DHX29Q7Z478 1369 aaKnown RBP19.78■□□□□ 0.76
SRRD-201ENST00000215917 ABCA9Q8IUA7 1624 aa19.77■□□□□ 0.75
SRRD-201ENST00000215917 MSH5O43196 834 aa19.77■□□□□ 0.75
SRRD-201ENST00000215917 RGS3P49796 1198 aa19.76■□□□□ 0.75
SRRD-201ENST00000215917 PNISRQ8TF01 805 aaKnown RBP19.74■□□□□ 0.75
SRRD-201ENST00000215917 NUTM2DQ5VT03 806 aaPredicted RBP19.74■□□□□ 0.75
SRRD-201ENST00000215917 SLC4A3P48751 1232 aa19.73■□□□□ 0.75
SRRD-201ENST00000215917 PANK3Q9H999 370 aa19.73■□□□□ 0.75
SRRD-201ENST00000215917 ATP10AO60312 1499 aa19.72■□□□□ 0.75
SRRD-201ENST00000215917 MAGI2Q86UL8 1455 aa19.72■□□□□ 0.75
SRRD-201ENST00000215917 ARAP3Q8WWN8 1544 aa19.72■□□□□ 0.75
SRRD-201ENST00000215917 NUDCQ9Y266 331 aa19.72■□□□□ 0.75
SRRD-201ENST00000215917 DISP3Q9P2K9 1392 aa19.72■□□□□ 0.75
SRRD-201ENST00000215917 WASHC2CQ9Y4E1 1318 aa19.71■□□□□ 0.75
SRRD-201ENST00000215917 IL27Q8NEV9 243 aa19.71■□□□□ 0.75
SRRD-201ENST00000215917 UGGT1Q9NYU2 1555 aa19.7■□□□□ 0.74
SRRD-201ENST00000215917 PRKCSHP14314 528 aaPredicted RBP19.7■□□□□ 0.74
SRRD-201ENST00000215917 CFAP70Q5T0N1 1121 aa19.7■□□□□ 0.74
SRRD-201ENST00000215917 TESK2Q96S53 571 aa19.7■□□□□ 0.74
SRRD-201ENST00000215917 MYBBP1AQ9BQG0 1328 aaKnown RBP19.69■□□□□ 0.74
SRRD-201ENST00000215917 PAK3O75914 559 aaPredicted RBP19.69■□□□□ 0.74
SRRD-201ENST00000215917 TMF1P82094 1093 aa19.69■□□□□ 0.74
SRRD-201ENST00000215917 E9PCH4 1651 aa19.69■□□□□ 0.74
SRRD-201ENST00000215917 ZNF518AQ6AHZ1 1483 aa19.69■□□□□ 0.74
SRRD-201ENST00000215917 FAM69CQ0P6D2 419 aa19.68■□□□□ 0.74
SRRD-201ENST00000215917 KTN1Q86UP2 1357 aaKnown RBP19.68■□□□□ 0.74
SRRD-201ENST00000215917 RALBP1Q15311 655 aa19.67■□□□□ 0.74
SRRD-201ENST00000215917 ADGRF5Q8IZF2 1346 aa19.67■□□□□ 0.74
SRRD-201ENST00000215917 CFAP65Q6ZU64 1925 aaKnown RBP19.66■□□□□ 0.74
SRRD-201ENST00000215917 INO80Q9ULG1 1556 aaPredicted RBP19.66■□□□□ 0.74
SRRD-201ENST00000215917 TRPM1Q7Z4N2 1603 aa19.65■□□□□ 0.74
SRRD-201ENST00000215917 NLRP13Q86W25 1043 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 68.6 ms