RNA–Protein interactions for RNA: ENSMUST00000172159.7

Traf1-207, Transcript of TNF receptor-associated factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-207ENSMUST00000172159 TonslQ6NZL6 1363 aa13.74□□□□□ -0.21
Traf1-207ENSMUST00000172159 Clasp1Q80TV8 1535 aaKnown RBP13.74□□□□□ -0.21
Traf1-207ENSMUST00000172159 AglF8VPN4 1532 aa13.72□□□□□ -0.21
Traf1-207ENSMUST00000172159 Nop58Q6DFW4 536 aaKnown RBP13.72□□□□□ -0.21
Traf1-207ENSMUST00000172159 AampJ3QN89 436 aa13.71□□□□□ -0.21
Traf1-207ENSMUST00000172159 Ssh2Q5SW75 1423 aa13.71□□□□□ -0.21
Traf1-207ENSMUST00000172159 Kdm5cP41230 1554 aa13.71□□□□□ -0.21
Traf1-207ENSMUST00000172159 Asxl1P59598 1514 aa13.7□□□□□ -0.22
Traf1-207ENSMUST00000172159 NclP09405 707 aaKnown RBP13.7□□□□□ -0.22
Traf1-207ENSMUST00000172159 Eid3Q3V124 375 aa13.7□□□□□ -0.22
Traf1-207ENSMUST00000172159 Zfp644E9QA22 1323 aa13.7□□□□□ -0.22
Traf1-207ENSMUST00000172159 Ttc37F8VPK0 1563 aa13.69□□□□□ -0.22
Traf1-207ENSMUST00000172159 Mphosph9A6H5Y1 991 aa13.69□□□□□ -0.22
Traf1-207ENSMUST00000172159 Wdr66E9Q743 1299 aa13.69□□□□□ -0.22
Traf1-207ENSMUST00000172159 Robo2Q7TPD3 1470 aa13.69□□□□□ -0.22
Traf1-207ENSMUST00000172159 Camsap2Q8C1B1 1461 aa13.68□□□□□ -0.22
Traf1-207ENSMUST00000172159 ShprhQ7TPQ3 1674 aa13.68□□□□□ -0.22
Traf1-207ENSMUST00000172159 Upf2A2AT37 1269 aaKnown RBP13.67□□□□□ -0.22
Traf1-207ENSMUST00000172159 SafbD3YXK2 937 aaKnown RBP13.67□□□□□ -0.22
Traf1-207ENSMUST00000172159 Sart1Q9Z315 806 aaKnown RBP13.67□□□□□ -0.22
Traf1-207ENSMUST00000172159 Naip5Q9R016 1403 aa13.66□□□□□ -0.22
Traf1-207ENSMUST00000172159 Rtn4Q99P72 1162 aaKnown RBP13.66□□□□□ -0.22
Traf1-207ENSMUST00000172159 Myo5cE9Q1F5 1742 aa13.66□□□□□ -0.22
Traf1-207ENSMUST00000172159 Rbm10Q99KG3 930 aaKnown RBP13.66□□□□□ -0.22
Traf1-207ENSMUST00000172159 Rprd2Q6NXI6 1469 aaKnown RBP13.66□□□□□ -0.22
Traf1-207ENSMUST00000172159 Nos1Q9Z0J4 1429 aa13.66□□□□□ -0.22
Traf1-207ENSMUST00000172159 Pik3c2gO70167 1506 aa13.65□□□□□ -0.22
Traf1-207ENSMUST00000172159 PtprgQ05909 1442 aa13.65□□□□□ -0.22
Traf1-207ENSMUST00000172159 Usp54Q8BL06 1588 aaKnown RBP13.65□□□□□ -0.23
Traf1-207ENSMUST00000172159 Cul9Q80TT8 1865 aa13.64□□□□□ -0.23
Traf1-207ENSMUST00000172159 Prdm16A2A935 1275 aa13.64□□□□□ -0.23
Traf1-207ENSMUST00000172159 Kif14L0N7N1 1674 aaKnown RBP13.63□□□□□ -0.23
Traf1-207ENSMUST00000172159 Kif1bQ60575 1816 aaKnown RBP13.63□□□□□ -0.23
Traf1-207ENSMUST00000172159 Atp10aO54827 1508 aa13.63□□□□□ -0.23
Traf1-207ENSMUST00000172159 Taok2Q6ZQ29 1240 aa13.63□□□□□ -0.23
Traf1-207ENSMUST00000172159 Depdc5P61460 1591 aa13.62□□□□□ -0.23
Traf1-207ENSMUST00000172159 Topbp1Q6ZQF0 1515 aa13.62□□□□□ -0.23
Traf1-207ENSMUST00000172159 Ttll5Q8CHB8 1328 aa13.62□□□□□ -0.23
Traf1-207ENSMUST00000172159 Fndc1E9Q043 1732 aa13.61□□□□□ -0.23
Traf1-207ENSMUST00000172159 Nup155Q99P88 1391 aaKnown RBP13.61□□□□□ -0.23
Traf1-207ENSMUST00000172159 Arid3cA6PWV5 409 aa13.61□□□□□ -0.23
Traf1-207ENSMUST00000172159 Hspa5P20029 655 aaKnown RBP13.61□□□□□ -0.23
Traf1-207ENSMUST00000172159 DroshaQ5HZJ0 1373 aaKnown RBP13.6□□□□□ -0.23
Traf1-207ENSMUST00000172159 Tmem131lQ3U3D7 1597 aa13.6□□□□□ -0.23
Traf1-207ENSMUST00000172159 Cdc42bpgQ80UW5 1551 aa13.6□□□□□ -0.23
Traf1-207ENSMUST00000172159 Trpm1Q2TV84 1622 aa13.59□□□□□ -0.23
Traf1-207ENSMUST00000172159 NgefQ8CHT1 710 aa13.59□□□□□ -0.23
Traf1-207ENSMUST00000172159 RereQ80TZ9 1558 aa13.59□□□□□ -0.23
Traf1-207ENSMUST00000172159 AdgbG3UZ78 1657 aa13.59□□□□□ -0.23
Traf1-207ENSMUST00000172159 Dot1lQ6XZL8 1540 aa13.59□□□□□ -0.23
Traf1-207ENSMUST00000172159 Znf518aB2RRF6 1478 aaKnown RBP13.58□□□□□ -0.24
Traf1-207ENSMUST00000172159 OvosQ3UU35 1456 aa13.58□□□□□ -0.24
Traf1-207ENSMUST00000172159 Plch2A2AP18 1501 aa13.58□□□□□ -0.24
Traf1-207ENSMUST00000172159 Uggt2E9Q4X2 1504 aa13.58□□□□□ -0.24
Traf1-207ENSMUST00000172159 Dip2cE9PWR4 1557 aa13.57□□□□□ -0.24
Traf1-207ENSMUST00000172159 Anp32aO35381 247 aa13.57□□□□□ -0.24
Traf1-207ENSMUST00000172159 Vgll3P85442 326 aa13.57□□□□□ -0.24
Traf1-207ENSMUST00000172159 Rrp7aQ9D1C9 280 aaKnown RBP13.57□□□□□ -0.24
Traf1-207ENSMUST00000172159 Pkd2O35245 966 aa13.56□□□□□ -0.24
Traf1-207ENSMUST00000172159 Map3k5O35099 1380 aa13.56□□□□□ -0.24
Traf1-207ENSMUST00000172159 Ccdc9Q8VC31 543 aaKnown RBP13.55□□□□□ -0.24
Traf1-207ENSMUST00000172159 Hecw2Q6I6G8 1578 aa13.55□□□□□ -0.24
Traf1-207ENSMUST00000172159 Prdm2A2A7B5 1709 aaKnown RBP13.55□□□□□ -0.24
Traf1-207ENSMUST00000172159 Usp47Q8BY87 1376 aa13.54□□□□□ -0.24
Traf1-207ENSMUST00000172159 Mbd5B1AYB6 1498 aa13.54□□□□□ -0.24
Traf1-207ENSMUST00000172159 Dhx9O70133 1380 aaKnown RBP13.54□□□□□ -0.24
Traf1-207ENSMUST00000172159 Spag9Q58A65 1321 aaKnown RBP13.54□□□□□ -0.24
Traf1-207ENSMUST00000172159 Iqgap1Q9JKF1 1657 aaKnown RBP13.53□□□□□ -0.24
Traf1-207ENSMUST00000172159 Map4P27546 1125 aaKnown RBP13.52□□□□□ -0.24
Traf1-207ENSMUST00000172159 Kcnn1Q9EQR3 537 aa13.52□□□□□ -0.25
Traf1-207ENSMUST00000172159 Abca6Q8K441 1624 aa13.52□□□□□ -0.25
Traf1-207ENSMUST00000172159 Prex1Q69ZK0 1650 aa13.51□□□□□ -0.25
Traf1-207ENSMUST00000172159 Lemd3Q9WU40 921 aa13.51□□□□□ -0.25
Traf1-207ENSMUST00000172159 Ppip5k1A2ARP1 1436 aa13.51□□□□□ -0.25
Traf1-207ENSMUST00000172159 Ptch1Q61115 1434 aa13.5□□□□□ -0.25
Traf1-207ENSMUST00000172159 Atp7aQ64430 1491 aa13.5□□□□□ -0.25
Traf1-207ENSMUST00000172159 Clstn2Q9ER65 966 aa13.5□□□□□ -0.25
Traf1-207ENSMUST00000172159 Tarbp1E9Q368 1579 aa13.49□□□□□ -0.25
Traf1-207ENSMUST00000172159 Cd109Q8R422 1442 aa13.49□□□□□ -0.25
Traf1-207ENSMUST00000172159 Trak1Q6PD31 939 aa13.49□□□□□ -0.25
Traf1-207ENSMUST00000172159 Anp32bQ9EST5 272 aaKnown RBP13.49□□□□□ -0.25
Traf1-207ENSMUST00000172159 Ube2q2Q8K2Z8 378 aa13.49□□□□□ -0.25
Traf1-207ENSMUST00000172159 AnkarA2RT91 1465 aa13.48□□□□□ -0.25
Traf1-207ENSMUST00000172159 Rock1P70335 1354 aa13.48□□□□□ -0.25
Traf1-207ENSMUST00000172159 Gli2Q0VGT2 1544 aa13.48□□□□□ -0.25
Traf1-207ENSMUST00000172159 Nolc1E9Q5C9 702 aaKnown RBP13.47□□□□□ -0.25
Traf1-207ENSMUST00000172159 Tshz2Q68FE9 1030 aa13.47□□□□□ -0.25
Traf1-207ENSMUST00000172159 Akap12Q9WTQ5 1684 aa13.47□□□□□ -0.25
Traf1-207ENSMUST00000172159 Synj2Q9D2G5 1434 aa13.47□□□□□ -0.25
Traf1-207ENSMUST00000172159 Iqgap3F8VQ29 1632 aa13.46□□□□□ -0.25
Traf1-207ENSMUST00000172159 Zmym4A2A791 1549 aaKnown RBP13.46□□□□□ -0.25
Traf1-207ENSMUST00000172159 Myom3A2ABU4 1439 aa13.46□□□□□ -0.26
Traf1-207ENSMUST00000172159 Pde4cQ3UEI1 686 aa13.45□□□□□ -0.26
Traf1-207ENSMUST00000172159 Naip6Q9JIB6 1403 aa13.45□□□□□ -0.26
Traf1-207ENSMUST00000172159 Hnrnpul2Q00PI9 745 aaKnown RBP13.45□□□□□ -0.26
Traf1-207ENSMUST00000172159 Abca8aQ8K442 1620 aa13.44□□□□□ -0.26
Traf1-207ENSMUST00000172159 Chrna2Q91X60 512 aa13.44□□□□□ -0.26
Traf1-207ENSMUST00000172159 Edc4Q3UJB9 1406 aaKnown RBP13.44□□□□□ -0.26
Traf1-207ENSMUST00000172159 Ylpm1Q9R0I7 1386 aaKnown RBP13.44□□□□□ -0.26
Traf1-207ENSMUST00000172159 ClspnQ80YR7 1315 aa13.43□□□□□ -0.26
Retrieved 100 of 22,080 RNA–protein pairs in 36.6 ms