RNA–Protein interactions for RNA: ENSMUST00000172159.7

Traf1-207, Transcript of TNF receptor-associated factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Traf1, Length 3,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Traf1-207ENSMUST00000172159 Gm35339A0A140LHH9 1649 aa20.14■□□□□ 0.81
Traf1-207ENSMUST00000172159 NischQ80TM9 1593 aa19.93■□□□□ 0.78
Traf1-207ENSMUST00000172159 Abcc9P70170 1546 aa19.43■□□□□ 0.7
Traf1-207ENSMUST00000172159 Abcc8B2RUS7 1588 aa19.14■□□□□ 0.65
Traf1-207ENSMUST00000172159 ScribQ80U72 1612 aa18.16■□□□□ 0.5
Traf1-207ENSMUST00000172159 Dcaf1Q80TR8 1506 aa17.86■□□□□ 0.45
Traf1-207ENSMUST00000172159 Kdm5dQ62240 1548 aa17.63■□□□□ 0.41
Traf1-207ENSMUST00000172159 NacadQ5SWP3 1504 aa17.55■□□□□ 0.4
Traf1-207ENSMUST00000172159 Ccdc180J3QNE4 1664 aa17.49■□□□□ 0.39
Traf1-207ENSMUST00000172159 Rhox8Q6VSS7 320 aa17.46■□□□□ 0.39
Traf1-207ENSMUST00000172159 Rb1cc1Q9ESK9 1588 aa17.43■□□□□ 0.38
Traf1-207ENSMUST00000172159 Rtl1Q7M732 1744 aa17.32■□□□□ 0.36
Traf1-207ENSMUST00000172159 Baz1aO88379 1555 aa17.25■□□□□ 0.35
Traf1-207ENSMUST00000172159 Sycp2Q9CUU3 1500 aa17.21■□□□□ 0.35
Traf1-207ENSMUST00000172159 Crybg2B7ZCC2 1516 aa17.12■□□□□ 0.33
Traf1-207ENSMUST00000172159 BicraF8VPZ9 1578 aa16.93■□□□□ 0.3
Traf1-207ENSMUST00000172159 Smarca2Q6DIC0 1577 aa16.85■□□□□ 0.29
Traf1-207ENSMUST00000172159 Zcchc6Q5BLK4 1491 aaKnown RBP16.82■□□□□ 0.28
Traf1-207ENSMUST00000172159 Cecr2E9Q2Z1 1453 aa16.45■□□□□ 0.22
Traf1-207ENSMUST00000172159 Smarca4Q3TKT4 1613 aaKnown RBP16.35■□□□□ 0.21
Traf1-207ENSMUST00000172159 DiexfQ8BTT6 772 aaKnown RBP16.32■□□□□ 0.2
Traf1-207ENSMUST00000172159 Ccdc136Q3TVA9 1136 aa16.29■□□□□ 0.2
Traf1-207ENSMUST00000172159 Synj1Q8CHC4 1574 aa16.26■□□□□ 0.19
Traf1-207ENSMUST00000172159 Brd4Q9ESU6 1400 aaKnown RBP16.25■□□□□ 0.19
Traf1-207ENSMUST00000172159 Cttnbp2B9EJA2 1648 aa16.23■□□□□ 0.19
Traf1-207ENSMUST00000172159 Rpgrip1Q9EPQ2 1331 aa16.22■□□□□ 0.19
Traf1-207ENSMUST00000172159 Pcgf6Q99NA9 353 aa16.21■□□□□ 0.19
Traf1-207ENSMUST00000172159 CftrP26361 1476 aa16.19■□□□□ 0.18
Traf1-207ENSMUST00000172159 Atad2bE9Q166 1460 aaKnown RBP16.18■□□□□ 0.18
Traf1-207ENSMUST00000172159 Pds5bQ4VA53 1446 aaKnown RBP16.17■□□□□ 0.18
Traf1-207ENSMUST00000172159 Iqgap2Q3UQ44 1575 aa16.16■□□□□ 0.18
Traf1-207ENSMUST00000172159 Trim41Q5NCC3 630 aa16.11■□□□□ 0.17
Traf1-207ENSMUST00000172159 Top2bQ64511 1612 aa16■□□□□ 0.15
Traf1-207ENSMUST00000172159 Thoc2B1AZI6 1594 aaKnown RBP15.97■□□□□ 0.15
Traf1-207ENSMUST00000172159 Wdr62Q3U3T8 1523 aa15.95■□□□□ 0.14
Traf1-207ENSMUST00000172159 Golga3P55937 1487 aa15.93■□□□□ 0.14
Traf1-207ENSMUST00000172159 Myt1Q8CFC2 1127 aa15.92■□□□□ 0.14
Traf1-207ENSMUST00000172159 HrcG5E8J6 738 aa15.89■□□□□ 0.13
Traf1-207ENSMUST00000172159 Frmpd1A2AKB4 1549 aa15.89■□□□□ 0.13
Traf1-207ENSMUST00000172159 Unc13aQ4KUS2 1712 aa15.87■□□□□ 0.13
Traf1-207ENSMUST00000172159 CenpbP27790 599 aa15.84■□□□□ 0.13
Traf1-207ENSMUST00000172159 Ercc6F8VPZ5 1481 aa15.82■□□□□ 0.12
Traf1-207ENSMUST00000172159 Cc2d2aQ8CFW7 1633 aa15.78■□□□□ 0.12
Traf1-207ENSMUST00000172159 Bcl11aQ9QYE3 773 aa15.77■□□□□ 0.12
Traf1-207ENSMUST00000172159 Amer1Q7TS75 1132 aa15.75■□□□□ 0.11
Traf1-207ENSMUST00000172159 TnnQ80Z71 1560 aa15.72■□□□□ 0.11
Traf1-207ENSMUST00000172159 Fam135aQ6NS59 1506 aa15.7■□□□□ 0.1
Traf1-207ENSMUST00000172159 Rsf1E9PWW9 1441 aaKnown RBP15.69■□□□□ 0.1
Traf1-207ENSMUST00000172159 Cep164Q5DU05 1446 aa15.69■□□□□ 0.1
Traf1-207ENSMUST00000172159 Ccdc88bQ4QRL3 1481 aa15.67■□□□□ 0.1
Traf1-207ENSMUST00000172159 Fmn1Q05860 1466 aa15.65■□□□□ 0.1
Traf1-207ENSMUST00000172159 Lamc3Q9R0B6 1581 aa15.64■□□□□ 0.09
Traf1-207ENSMUST00000172159 Esf1Q3V1V3 845 aaKnown RBP15.64■□□□□ 0.09
Traf1-207ENSMUST00000172159 Cngb1E1AZ71 1325 aa15.62■□□□□ 0.09
Traf1-207ENSMUST00000172159 Las1lA2BE28 776 aaKnown RBP15.61■□□□□ 0.09
Traf1-207ENSMUST00000172159 Phldb1Q6PDH0 1371 aaKnown RBP15.56■□□□□ 0.08
Traf1-207ENSMUST00000172159 Top2aQ01320 1528 aaKnown RBP15.55■□□□□ 0.08
Traf1-207ENSMUST00000172159 Chic1Q8CBW7 227 aa15.53■□□□□ 0.08
Traf1-207ENSMUST00000172159 Baz1bQ9Z277 1479 aa15.52■□□□□ 0.07
Traf1-207ENSMUST00000172159 PrkcshO08795 521 aa15.49■□□□□ 0.07
Traf1-207ENSMUST00000172159 Camsap1A2AHC3 1581 aa15.41■□□□□ 0.06
Traf1-207ENSMUST00000172159 Kif15Q6P9L6 1387 aa15.38■□□□□ 0.05
Traf1-207ENSMUST00000172159 Dnajc5bQ9CQ94 199 aa15.35■□□□□ 0.05
Traf1-207ENSMUST00000172159 1700123L14RikQ3V2K7 440 aa15.33■□□□□ 0.05
Traf1-207ENSMUST00000172159 Neurod1Q60867 357 aa15.32■□□□□ 0.04
Traf1-207ENSMUST00000172159 Rapgef2Q8CHG7 1496 aa15.3■□□□□ 0.04
Traf1-207ENSMUST00000172159 Eif4g1Q6NZJ6 1600 aaKnown RBP15.28■□□□□ 0.04
Traf1-207ENSMUST00000172159 Cux2P70298 1426 aa15.27■□□□□ 0.04
Traf1-207ENSMUST00000172159 Ubl4bQ9CQ84 188 aa15.26■□□□□ 0.03
Traf1-207ENSMUST00000172159 Ccdc18Q640L5 1455 aa15.25■□□□□ 0.03
Traf1-207ENSMUST00000172159 Mrc2Q64449 1479 aa15.22■□□□□ 0.03
Traf1-207ENSMUST00000172159 Grin2bQ01097 1482 aa15.22■□□□□ 0.03
Traf1-207ENSMUST00000172159 NrkQ9R0G8 1455 aa15.22■□□□□ 0.03
Traf1-207ENSMUST00000172159 Acin1Q9JIX8 1338 aaKnown RBP15.21■□□□□ 0.03
Traf1-207ENSMUST00000172159 Kif21aQ9QXL2 1672 aa15.17■□□□□ 0.02
Traf1-207ENSMUST00000172159 Shroom4Q1W617 1475 aa15.16■□□□□ 0.02
Traf1-207ENSMUST00000172159 PtprkP35822 1457 aa15.15■□□□□ 0.02
Traf1-207ENSMUST00000172159 Cep162Q6ZQ06 1403 aa15.11■□□□□ 0.01
Traf1-207ENSMUST00000172159 Plppr3Q7TPB0 716 aa15.1■□□□□ 0.01
Traf1-207ENSMUST00000172159 Gab3Q8BSM5 595 aa15.1■□□□□ 0.01
Traf1-207ENSMUST00000172159 PogzQ8BZH4 1409 aaKnown RBP15.1■□□□□ 0.01
Traf1-207ENSMUST00000172159 LrpprcQ6PB66 1392 aaKnown RBP15.08■□□□□ 0.01
Traf1-207ENSMUST00000172159 Arhgap35Q91YM2 1499 aa15.05■□□□□ 0
Traf1-207ENSMUST00000172159 Map3k1P53349 1493 aa15.04■□□□□ -0
Traf1-207ENSMUST00000172159 Efcab5A0JP43 1406 aa15.04■□□□□ -0
Traf1-207ENSMUST00000172159 Duox2A2AQ99 1517 aa15.04■□□□□ -0
Traf1-207ENSMUST00000172159 Crocc2F6XLV1 1638 aa15.03■□□□□ -0
Traf1-207ENSMUST00000172159 Samd9lQ69Z37 1561 aa15.01□□□□□ -0.01
Traf1-207ENSMUST00000172159 Npm1Q61937 292 aaKnown RBP15.01□□□□□ -0.01
Traf1-207ENSMUST00000172159 Dhx29Q6PGC1 1365 aaKnown RBP15□□□□□ -0.01
Traf1-207ENSMUST00000172159 Mroh2bQ7M6Y6 1581 aa14.99□□□□□ -0.01
Traf1-207ENSMUST00000172159 Il27Q8K3I6 234 aa14.99□□□□□ -0.01
Traf1-207ENSMUST00000172159 AqrQ8CFQ3 1481 aaKnown RBP14.96□□□□□ -0.01
Traf1-207ENSMUST00000172159 Gpatch8A2A6A1 1505 aa14.96□□□□□ -0.01
Traf1-207ENSMUST00000172159 Lrriq1Q0P5X1 1673 aa14.94□□□□□ -0.02
Traf1-207ENSMUST00000172159 Ttbk1Q6PCN3 1308 aa14.93□□□□□ -0.02
Traf1-207ENSMUST00000172159 SynmQ70IV5 1561 aa14.92□□□□□ -0.02
Traf1-207ENSMUST00000172159 Urb2E9Q7L1 1524 aaKnown RBP14.89□□□□□ -0.03
Traf1-207ENSMUST00000172159 Csrnp3P59055 597 aa14.89□□□□□ -0.03
Traf1-207ENSMUST00000172159 CatipB9EKE5 520 aa14.88□□□□□ -0.03
Retrieved 100 of 22,080 RNA–protein pairs in 45.3 ms