RNA–Protein interactions for RNA: ENSMUST00000170033.1

Lig4-202, Transcript of DNA ligase 4, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Lig4, Length 3,105 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Lig4-202ENSMUST00000170033 Kiaa1211Q5PR69 1207 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Kcnn1Q9EQR3 537 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Mtus2Q3UHD3 1353 aa8.65□□□□□ -1.02
Lig4-202ENSMUST00000170033 Kdm6bQ5NCY0 1641 aa8.64□□□□□ -1.03
Lig4-202ENSMUST00000170033 Mroh2aD3Z750 1679 aa8.64□□□□□ -1.03
Lig4-202ENSMUST00000170033 NgefQ8CHT1 710 aa8.64□□□□□ -1.03
Lig4-202ENSMUST00000170033 Rtn4Q99P72 1162 aaKnown RBP8.64□□□□□ -1.03
Lig4-202ENSMUST00000170033 Zcchc11B2RX14 1644 aaKnown RBP8.64□□□□□ -1.03
Lig4-202ENSMUST00000170033 Hspa5P20029 655 aaKnown RBP8.63□□□□□ -1.03
Lig4-202ENSMUST00000170033 Iqgap1Q9JKF1 1657 aaKnown RBP8.62□□□□□ -1.03
Lig4-202ENSMUST00000170033 Cwc22Q8C5N3 908 aaKnown RBP8.62□□□□□ -1.03
Lig4-202ENSMUST00000170033 Rock2P70336 1388 aa8.62□□□□□ -1.03
Lig4-202ENSMUST00000170033 Cpsf1Q9EPU4 1441 aaKnown RBP8.62□□□□□ -1.03
Lig4-202ENSMUST00000170033 Tmed8Q3UHI4 326 aa8.61□□□□□ -1.03
Lig4-202ENSMUST00000170033 Arid4bA2CG63 1314 aaKnown RBP8.61□□□□□ -1.03
Lig4-202ENSMUST00000170033 Znf710Q3U288 666 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Plekhg5Q66T02 1073 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Ppip5k1A2ARP1 1436 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Arhgap31A6X8Z5 1425 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Rock1P70335 1354 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Gapvd1Q6PAR5 1458 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Fancd2Q80V62 1450 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Usp47Q8BY87 1376 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Gm32742A0A1B0GT42 1604 aa8.6□□□□□ -1.03
Lig4-202ENSMUST00000170033 Supt6hQ62383 1726 aaKnown RBP8.59□□□□□ -1.03
Lig4-202ENSMUST00000170033 AampJ3QN89 436 aa8.59□□□□□ -1.03
Lig4-202ENSMUST00000170033 Gm13695A2AK44 830 aa8.59□□□□□ -1.03
Lig4-202ENSMUST00000170033 Chrna2Q91X60 512 aa8.58□□□□□ -1.04
Lig4-202ENSMUST00000170033 PtprgQ05909 1442 aa8.58□□□□□ -1.04
Lig4-202ENSMUST00000170033 4930567H17RikQ3V0K5 233 aa8.58□□□□□ -1.04
Lig4-202ENSMUST00000170033 Naip6Q9JIB6 1403 aa8.58□□□□□ -1.04
Lig4-202ENSMUST00000170033 Lrrc9Q8CDN9 1456 aa8.58□□□□□ -1.04
Lig4-202ENSMUST00000170033 Kif14L0N7N1 1674 aaKnown RBP8.57□□□□□ -1.04
Lig4-202ENSMUST00000170033 Tubgcp6G5E8P0 1769 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Abca17E9PX95 1733 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 NhsB1AV60 1647 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Ppp1r18Q8BQ30 594 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Cabp1Q9JLK7 227 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 RalgapbQ8BQZ4 1484 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Asxl1P59598 1514 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Adgrb2Q8CGM1 1561 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Pkd2O35245 966 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Os9Q8K2C7 672 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Ipo4Q8VI75 1082 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Clstn2Q9ER65 966 aa8.56□□□□□ -1.04
Lig4-202ENSMUST00000170033 Upf2A2AT37 1269 aaKnown RBP8.55□□□□□ -1.04
Lig4-202ENSMUST00000170033 Abcc3B2RX12 1523 aa8.54□□□□□ -1.04
Lig4-202ENSMUST00000170033 Rtl5Q5DTT4 599 aa8.54□□□□□ -1.04
Lig4-202ENSMUST00000170033 Polr3aB2RXC6 1390 aa8.54□□□□□ -1.04
Lig4-202ENSMUST00000170033 Brd2Q7JJ13 798 aaKnown RBP8.53□□□□□ -1.04
Lig4-202ENSMUST00000170033 Cfap65Q3V0B4 1847 aa8.53□□□□□ -1.04
Lig4-202ENSMUST00000170033 Abca8bQ8K440 1620 aa8.52□□□□□ -1.04
Lig4-202ENSMUST00000170033 Dot1lQ6XZL8 1540 aa8.52□□□□□ -1.05
Lig4-202ENSMUST00000170033 Irx3P81067 507 aa8.52□□□□□ -1.05
Lig4-202ENSMUST00000170033 Ecm2Q5FW85 670 aa8.52□□□□□ -1.05
Lig4-202ENSMUST00000170033 Mug2P28666 1451 aa8.52□□□□□ -1.05
Lig4-202ENSMUST00000170033 Myom3A2ABU4 1439 aa8.52□□□□□ -1.05
Lig4-202ENSMUST00000170033 Fgd6Q69ZL1 1399 aa8.51□□□□□ -1.05
Lig4-202ENSMUST00000170033 Chd1P40201 1711 aa8.51□□□□□ -1.05
Lig4-202ENSMUST00000170033 Robo2Q7TPD3 1470 aa8.51□□□□□ -1.05
Lig4-202ENSMUST00000170033 Fkbp15Q6P9Q6 1216 aaKnown RBP8.51□□□□□ -1.05
Lig4-202ENSMUST00000170033 AnkarA2RT91 1465 aa8.5□□□□□ -1.05
Lig4-202ENSMUST00000170033 Chic2Q9D9G3 165 aa8.5□□□□□ -1.05
Lig4-202ENSMUST00000170033 Washc2Q6PGL7 1334 aa8.5□□□□□ -1.05
Lig4-202ENSMUST00000170033 Arhgap27A2AB59 869 aa8.5□□□□□ -1.05
Lig4-202ENSMUST00000170033 DekQ7TNV0 380 aaKnown RBP8.5□□□□□ -1.05
Lig4-202ENSMUST00000170033 Dapk1Q80YE7 1442 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Anp32aO35381 247 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Tdrd9Q14BI7 1383 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Nup155Q99P88 1391 aaKnown RBP8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Kif1bQ60575 1816 aaKnown RBP8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Hs1bp3Q3TC93 395 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Zbtb4Q5F293 982 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Jph4Q80WT0 628 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 Cep170Q6A065 1588 aa8.49□□□□□ -1.05
Lig4-202ENSMUST00000170033 PnisrA2AJT4 805 aaKnown RBP8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Cdc42bpbQ7TT50 1713 aa8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Kcng1A2BDX4 514 aa8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Zfp91Q62511 572 aa8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Cdk13Q69ZA1 1511 aaKnown RBP8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Kdm5cP41230 1554 aa8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Neo1P97798 1493 aa8.47□□□□□ -1.05
Lig4-202ENSMUST00000170033 Mink1Q9JM52 1308 aa8.46□□□□□ -1.05
Lig4-202ENSMUST00000170033 Arhgap5P97393 1501 aa8.46□□□□□ -1.06
Lig4-202ENSMUST00000170033 Gm14025A2AP89 1413 aa8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Zbtb7cQ8VCZ7 619 aa8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Ttll5Q8CHB8 1328 aa8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Cep152A2AUM9 1736 aaKnown RBP8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Supt16hQ920B9 1047 aa8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Erich6D3Z6S9 713 aa8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Chmp4bQ9D8B3 224 aaKnown RBP8.45□□□□□ -1.06
Lig4-202ENSMUST00000170033 Myo5cE9Q1F5 1742 aa8.44□□□□□ -1.06
Lig4-202ENSMUST00000170033 Pelp1Q9DBD5 1123 aaKnown RBP8.44□□□□□ -1.06
Lig4-202ENSMUST00000170033 Armcx1Q9CX83 456 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Sbno1Q689Z5 1390 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Ssh2Q5SW75 1423 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Uggt2E9Q4X2 1504 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Calr4Q3TQS0 420 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Igf1rQ60751 1373 aa8.43□□□□□ -1.06
Lig4-202ENSMUST00000170033 Nsd2Q8BVE8 1365 aa8.43□□□□□ -1.06
Retrieved 100 of 22,080 RNA–protein pairs in 9.6 ms