RNA–Protein interactions for RNA: ENSMUST00000168967.8

Pdlim5-204, Transcript of PDZ and LIM domain protein 5, mousemouse

TSL 1 (best) BASIC

Gene Pdlim5, Length 1,755 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pdlim5-204ENSMUST00000168967 Vsig10D3YX43 558 aa14.34□□□□□ -0.11
Pdlim5-204ENSMUST00000168967 PtprkP35822 1457 aa14.34□□□□□ -0.11
Pdlim5-204ENSMUST00000168967 Lamc3Q9R0B6 1581 aa14.33□□□□□ -0.11
Pdlim5-204ENSMUST00000168967 SafbD3YXK2 937 aaKnown RBP14.33□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Naip1Q9QWK5 1403 aa14.32□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Mrc2Q64449 1479 aa14.32□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Mllt3A2AM29 569 aa14.32□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Eid3Q3V124 375 aa14.31□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Rasgrp4Q8BTM9 673 aa14.31□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Tpcn2Q8BWC0 731 aa14.3□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 AqrQ8CFQ3 1481 aaKnown RBP14.3□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 OscarQ8VBT3 265 aa14.29□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Pelp1Q9DBD5 1123 aaKnown RBP14.29□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Bcl2l13P59017 434 aa14.29□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Fhad1A6PWD2 1420 aa14.28□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Mia2Q91ZV0 1396 aa14.28□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Camsap1A2AHC3 1581 aa14.28□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Prr7Q3V0I2 269 aa14.27□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Fam181bQ80VF6 417 aa14.27□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Bcl11aQ9QYE3 773 aa14.27□□□□□ -0.12
Pdlim5-204ENSMUST00000168967 Kiaa1522A2A7S8 1013 aa14.26□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Dkk1O54908 272 aa14.26□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 XpcP51612 930 aa14.26□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Dnm1lQ8K1M6 742 aa14.26□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Mroh2bQ7M6Y6 1581 aa14.26□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 BlmO88700 1416 aa14.26□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 NclP09405 707 aaKnown RBP14.25□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Ankrd26Q811D2 1581 aa14.25□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Npm1Q61937 292 aaKnown RBP14.24□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Ggt6Q6PDE7 497 aa14.24□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Ap3b1Q9Z1T1 1105 aa14.24□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 CntlnA2AM05 1397 aa14.23□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Lrfn2Q80TG9 788 aa14.23□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Prrt3Q6PE13 971 aa14.22□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Peg3Q3URU2 1571 aa14.22□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Vps8Q0P5W1 1427 aa14.22□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Calr4Q3TQS0 420 aa14.22□□□□□ -0.13
Pdlim5-204ENSMUST00000168967 Kdm2aP59997 1161 aa14.2□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Dhx30Q99PU8 1217 aaKnown RBP14.2□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Pcf11G3X9Z4 1553 aa14.2□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Slx4Q6P1D7 1565 aa14.19□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Lmo7E9PYF4 1699 aaKnown RBP14.18□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Fyco1Q8VDC1 1437 aa14.18□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Grin2bQ01097 1482 aa14.18□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Ncoa2Q61026 1462 aa14.18□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Masp1P98064 704 aa14.17□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Smg6P61406 1418 aaKnown RBP14.17□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Crocc2F6XLV1 1638 aa14.17□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Efcab5A0JP43 1406 aa14.17□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Fam117aQ7TNF9 451 aa14.16□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Dhx29Q6PGC1 1365 aaKnown RBP14.15□□□□□ -0.14
Pdlim5-204ENSMUST00000168967 Axin1O35625 863 aa14.14□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Msh5Q9QUM7 833 aa14.14□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Washc2Q6PGL7 1334 aa14.14□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Kif15Q6P9L6 1387 aa14.13□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 PsdQ5DTT2 1024 aa14.13□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 3425401B19RikD3Z1D3 1412 aa14.13□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Cux2P70298 1426 aa14.13□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Cux1P53564 1515 aa14.13□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 JmyQ9QXM1 983 aa14.11□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 GnpatP98192 678 aa14.1□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Onecut3Q8K557 490 aa14.1□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Fam50aQ9WV03 339 aaKnown RBP14.1□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Fhod3Q76LL6 1578 aa14.1□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Naip2Q9QUK4 1447 aa14.09□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Carmil1Q6EDY6 1374 aa14.09□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Nolc1E9Q5C9 702 aaKnown RBP14.09□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Cul7Q8VE73 1689 aa14.08□□□□□ -0.15
Pdlim5-204ENSMUST00000168967 Gga1Q8R0H9 635 aa14.08□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Naip5Q9R016 1403 aa14.08□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Hspa5P20029 655 aaKnown RBP14.07□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Supt16hQ920B9 1047 aa14.06□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Pdcd7Q9WTY1 482 aa14.06□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Prom2Q3UUY6 835 aa14.05□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Foxd4Q60688 444 aa14.04□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Unc5aQ8K1S4 898 aa14.04□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Lrriq1Q0P5X1 1673 aa14.04□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Kif21aQ9QXL2 1672 aa14.03□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Crim1Q9JLL0 1037 aa14.03□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Urb2E9Q7L1 1524 aaKnown RBP14.02□□□□□ -0.16
Pdlim5-204ENSMUST00000168967 Pprc1Q6NZN1 1644 aa14.02□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Wdr43Q6ZQL4 677 aaKnown RBP14.01□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Ier5lQ99J55 406 aa14.01□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Tor1aip2Q8BYU6 502 aa14□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 RydenQ8CAK3 290 aaKnown RBP14□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Il27Q8K3I6 234 aa14□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Gm7298A0A0N4SVU1 1476 aa14□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Polr1aO35134 1717 aaKnown RBP14□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Aldh16a1Q571I9 802 aa13.99□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Mink1Q9JM52 1308 aa13.99□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Gm1043A0A140LJC2 1431 aa13.98□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 PrimpolQ6P1E7 537 aa13.97□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Ppfibp2O35711 882 aa13.96□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Irx5Q9JKQ4 484 aa13.96□□□□□ -0.17
Pdlim5-204ENSMUST00000168967 Dnajc5gQ8C632 165 aa13.96□□□□□ -0.18
Pdlim5-204ENSMUST00000168967 Clec2iQ9WVF9 217 aa13.94□□□□□ -0.18
Pdlim5-204ENSMUST00000168967 A2mQ6GQT1 1474 aa13.94□□□□□ -0.18
Pdlim5-204ENSMUST00000168967 Setbp1Q9Z180 1582 aa13.94□□□□□ -0.18
Pdlim5-204ENSMUST00000168967 GopcQ8BH60 463 aa13.94□□□□□ -0.18
Pdlim5-204ENSMUST00000168967 Lmtk2Q3TYD6 1471 aa13.93□□□□□ -0.18
Retrieved 100 of 22,080 RNA–protein pairs in 29.2 ms