RNA–Protein interactions for RNA: ENSMUST00000124246.3

Gt(ROSA)26Sor-201, mousemouse

TSL 1 (best) BASIC

Gene Gt(ROSA)26Sor, Length 1,181 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Gt(ROSA)26Sor-201ENSMUST00000124246 Ncoa1P70365 1447 aa33.2■■■□□ 2.91
Gt(ROSA)26Sor-201ENSMUST00000124246 Med14A2ABV5 1459 aaKnown RBP33.18■■■□□ 2.9
Gt(ROSA)26Sor-201ENSMUST00000124246 Plch2A2AP18 1501 aa33.18■■■□□ 2.9
Gt(ROSA)26Sor-201ENSMUST00000124246 Naip5Q9R016 1403 aa33.16■■■□□ 2.9
Gt(ROSA)26Sor-201ENSMUST00000124246 Topbp1Q6ZQF0 1515 aa33.16■■■□□ 2.9
Gt(ROSA)26Sor-201ENSMUST00000124246 Abca17E9PX95 1733 aa33.16■■■□□ 2.9
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm13697A2AK42 830 aa33.14■■■□□ 2.9
Gt(ROSA)26Sor-201ENSMUST00000124246 Mtus2Q3UHD3 1353 aa33.13■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 Arhgap23Q69ZH9 1483 aa33.12■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 Abcc5Q9R1X5 1436 aa33.11■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 Phlpp1Q8CHE4 1687 aa33.11■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 Ecm2Q5FW85 670 aa33.11■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 GphnQ8BUV3 769 aaKnown RBP33.1■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 Rimbp3Q3V0F0 1606 aa33.09■■■□□ 2.89
Gt(ROSA)26Sor-201ENSMUST00000124246 Plekhh2Q8C115 1491 aa33.05■■■□□ 2.88
Gt(ROSA)26Sor-201ENSMUST00000124246 Spag9Q58A65 1321 aaKnown RBP33.02■■■□□ 2.88
Gt(ROSA)26Sor-201ENSMUST00000124246 Abcc6Q9R1S7 1498 aa32.99■■■□□ 2.87
Gt(ROSA)26Sor-201ENSMUST00000124246 Usp54Q8BL06 1588 aaKnown RBP32.96■■■□□ 2.87
Gt(ROSA)26Sor-201ENSMUST00000124246 Adgrl2Q8JZZ7 1487 aa32.94■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Gli3Q61602 1583 aa32.94■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Scaf11E9PZM7 1456 aaKnown RBP32.93■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Myo5cE9Q1F5 1742 aa32.93■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Cabp1Q9JLK7 227 aa32.92■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Adgrb2Q8CGM1 1561 aa32.92■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Zbtb7cQ8VCZ7 619 aa32.91■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Kdm3bQ6ZPY7 1562 aa32.91■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 AlkP97793 1621 aa32.91■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Hfm1D3Z4R1 1434 aa32.9■■■□□ 2.86
Gt(ROSA)26Sor-201ENSMUST00000124246 Iqsec2Q5DU25 1478 aa32.87■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Rims2Q9EQZ7 1530 aa32.87■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Rapgef3Q8VCC8 918 aa32.84■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Adamts7Q68SA9 1657 aa32.84■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Prex1Q69ZK0 1650 aa32.84■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 ShprhQ7TPQ3 1674 aa32.84■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Ssh2Q5SW75 1423 aa32.84■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Il16O54824 1322 aa32.83■■■□□ 2.85
Gt(ROSA)26Sor-201ENSMUST00000124246 Chd2E9PZM4 1827 aaKnown RBP32.82■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 Hspa1lP16627 641 aa32.82■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 Kif1bQ60575 1816 aaKnown RBP32.81■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 3425401B19RikD3Z1D3 1412 aa32.81■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 Vps8Q0P5W1 1427 aa32.81■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 DroshaQ5HZJ0 1373 aaKnown RBP32.78■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 Chic2Q9D9G3 165 aa32.77■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 Gemin5Q8BX17 1502 aaKnown RBP32.77■■■□□ 2.84
Gt(ROSA)26Sor-201ENSMUST00000124246 Robo2Q7TPD3 1470 aa32.75■■■□□ 2.83
Gt(ROSA)26Sor-201ENSMUST00000124246 Hnrnpul2Q00PI9 745 aaKnown RBP32.74■■■□□ 2.83
Gt(ROSA)26Sor-201ENSMUST00000124246 PzpQ61838 1495 aa32.71■■■□□ 2.83
Gt(ROSA)26Sor-201ENSMUST00000124246 Akap12Q9WTQ5 1684 aa32.68■■■□□ 2.82
Gt(ROSA)26Sor-201ENSMUST00000124246 GapdhsQ64467 440 aa32.67■■■□□ 2.82
Gt(ROSA)26Sor-201ENSMUST00000124246 Pde4cQ3UEI1 686 aa32.66■■■□□ 2.82
Gt(ROSA)26Sor-201ENSMUST00000124246 Arid4bA2CG63 1314 aaKnown RBP32.66■■■□□ 2.82
Gt(ROSA)26Sor-201ENSMUST00000124246 Kdm5aQ3UXZ9 1690 aa32.66■■■□□ 2.82
Gt(ROSA)26Sor-201ENSMUST00000124246 Iqgap1Q9JKF1 1657 aaKnown RBP32.66■■■□□ 2.82
Gt(ROSA)26Sor-201ENSMUST00000124246 Adgrb3Q80ZF8 1522 aa32.63■■■□□ 2.81
Gt(ROSA)26Sor-201ENSMUST00000124246 Tubgcp6G5E8P0 1769 aa32.63■■■□□ 2.81
Gt(ROSA)26Sor-201ENSMUST00000124246 Zc3h13E9Q784 1729 aaKnown RBP32.63■■■□□ 2.81
Gt(ROSA)26Sor-201ENSMUST00000124246 Asxl1P59598 1514 aa32.62■■■□□ 2.81
Gt(ROSA)26Sor-201ENSMUST00000124246 Nrxn3Q6P9K9 1571 aa32.59■■■□□ 2.81
Gt(ROSA)26Sor-201ENSMUST00000124246 Fhad1A6PWD2 1420 aa32.57■■■□□ 2.8
Gt(ROSA)26Sor-201ENSMUST00000124246 Bcl11bQ99PV8 884 aa32.53■■■□□ 2.8
Gt(ROSA)26Sor-201ENSMUST00000124246 Kif13aQ9EQW7 1749 aa32.53■■■□□ 2.8
Gt(ROSA)26Sor-201ENSMUST00000124246 Cypt1Q8CH20 168 aa32.49■■■□□ 2.79
Gt(ROSA)26Sor-201ENSMUST00000124246 Lamc1P02468 1607 aaKnown RBP32.45■■■□□ 2.79
Gt(ROSA)26Sor-201ENSMUST00000124246 NclP09405 707 aaKnown RBP32.45■■■□□ 2.79
Gt(ROSA)26Sor-201ENSMUST00000124246 Ttc21bQ0HA38 1315 aa32.45■■■□□ 2.78
Gt(ROSA)26Sor-201ENSMUST00000124246 Itsn1Q9Z0R4 1714 aa32.44■■■□□ 2.78
Gt(ROSA)26Sor-201ENSMUST00000124246 Tmem131lQ3U3D7 1597 aa32.43■■■□□ 2.78
Gt(ROSA)26Sor-201ENSMUST00000124246 Skint5A7XUY5 1461 aa32.41■■■□□ 2.78
Gt(ROSA)26Sor-201ENSMUST00000124246 Txndc2Q6P902 515 aa32.4■■■□□ 2.78
Gt(ROSA)26Sor-201ENSMUST00000124246 Med1Q925J9 1575 aa32.39■■■□□ 2.78
Gt(ROSA)26Sor-201ENSMUST00000124246 AnkarA2RT91 1465 aa32.36■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 UacaQ8CGB3 1411 aa32.36■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Clstn2Q9ER65 966 aa32.36■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Setd1aE9PYH6 1716 aa32.36■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Prdm2A2A7B5 1709 aaKnown RBP32.34■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Ylpm1Q9R0I7 1386 aaKnown RBP32.34■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Map4P27546 1125 aaKnown RBP32.33■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Fam50aQ9WV03 339 aaKnown RBP32.33■■■□□ 2.77
Gt(ROSA)26Sor-201ENSMUST00000124246 Eif2ak4Q9QZ05 1648 aa32.32■■■□□ 2.76
Gt(ROSA)26Sor-201ENSMUST00000124246 Ino80Q6ZPV2 1559 aa32.32■■■□□ 2.76
Gt(ROSA)26Sor-201ENSMUST00000124246 Rfx7F8VPJ6 1459 aa32.3■■■□□ 2.76
Gt(ROSA)26Sor-201ENSMUST00000124246 Nup155Q99P88 1391 aaKnown RBP32.3■■■□□ 2.76
Gt(ROSA)26Sor-201ENSMUST00000124246 Naip7Q9JIB3 1402 aa32.27■■■□□ 2.76
Gt(ROSA)26Sor-201ENSMUST00000124246 Myom3A2ABU4 1439 aa32.25■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Zfp644E9QA22 1323 aa32.22■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Efcab6Q6P1E8 1516 aa32.21■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Lmtk3Q5XJV6 1424 aa32.21■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Gm13695A2AK44 830 aa32.21■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Thsd7aQ69ZU6 1645 aa32.21■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Myo3aQ8K3H5 1613 aa32.21■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Nsd2Q8BVE8 1365 aa32.2■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 Amigo3Q8C2S7 508 aa32.2■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 P3h3Q8CG70 732 aa32.2■■■□□ 2.75
Gt(ROSA)26Sor-201ENSMUST00000124246 DnmbpQ6TXD4 1580 aa32.19■■■□□ 2.74
Gt(ROSA)26Sor-201ENSMUST00000124246 Psme1P97371 249 aa32.18■■■□□ 2.74
Gt(ROSA)26Sor-201ENSMUST00000124246 Cdk13Q69ZA1 1511 aaKnown RBP32.17■■■□□ 2.74
Gt(ROSA)26Sor-201ENSMUST00000124246 PplQ9R269 1755 aa32.17■■■□□ 2.74
Gt(ROSA)26Sor-201ENSMUST00000124246 Iqgap3F8VQ29 1632 aa32.13■■■□□ 2.73
Gt(ROSA)26Sor-201ENSMUST00000124246 Tecpr2Q3UH45 1423 aa32.13■■■□□ 2.73
Gt(ROSA)26Sor-201ENSMUST00000124246 Col18a1P39061 1774 aa32.12■■■□□ 2.73
Retrieved 100 of 22,080 RNA–protein pairs in 9 ms