RNA–Protein interactions for RNA: ENSMUST00000111816.2

Trim71-201, Transcript of E3 ubiquitin-protein ligase TRIM71, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim71, Length 9,332 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim71-201ENSMUST00000111816 Drc7Q6V3W6 876 aa22.49■■□□□ 1.19
Trim71-201ENSMUST00000111816 Spag9Q58A65 1321 aaKnown RBP22.49■■□□□ 1.19
Trim71-201ENSMUST00000111816 Mfap1aC0HKD8 439 aaKnown RBP22.49■■□□□ 1.19
Trim71-201ENSMUST00000111816 Mfap1bC0HKD9 439 aaKnown RBP22.49■■□□□ 1.19
Trim71-201ENSMUST00000111816 Srek1Q8BZX4 494 aaKnown RBP22.48■■□□□ 1.19
Trim71-201ENSMUST00000111816 Setd5Q5XJV7 1441 aa22.48■■□□□ 1.19
Trim71-201ENSMUST00000111816 Mia2Q91ZV0 1396 aa22.47■■□□□ 1.19
Trim71-201ENSMUST00000111816 Krt82Q99M74 516 aa22.47■■□□□ 1.19
Trim71-201ENSMUST00000111816 Evc2Q8K1G2 1220 aa22.47■■□□□ 1.19
Trim71-201ENSMUST00000111816 Nap1l3Q794H2 544 aa22.47■■□□□ 1.19
Trim71-201ENSMUST00000111816 Plcd4Q8K3R3 807 aa22.47■■□□□ 1.19
Trim71-201ENSMUST00000111816 Map3k7clP58500 142 aa22.46■■□□□ 1.19
Trim71-201ENSMUST00000111816 OptnQ8K3K8 584 aa22.46■■□□□ 1.19
Trim71-201ENSMUST00000111816 NaspQ99MD9 773 aaKnown RBP22.46■■□□□ 1.19
Trim71-201ENSMUST00000111816 Utp3Q9JI13 469 aaKnown RBP22.46■■□□□ 1.19
Trim71-201ENSMUST00000111816 NgefQ8CHT1 710 aa22.44■■□□□ 1.18
Trim71-201ENSMUST00000111816 Gtf2a1Q99PM3 378 aa22.43■■□□□ 1.18
Trim71-201ENSMUST00000111816 AcrbpQ3V140 540 aa22.43■■□□□ 1.18
Trim71-201ENSMUST00000111816 Ccdc43Q9CR29 222 aaKnown RBP22.42■■□□□ 1.18
Trim71-201ENSMUST00000111816 Gripap1Q8VD04 806 aa22.42■■□□□ 1.18
Trim71-201ENSMUST00000111816 Rb1cc1Q9ESK9 1588 aa22.42■■□□□ 1.18
Trim71-201ENSMUST00000111816 Mtus2Q3UHD3 1353 aa22.42■■□□□ 1.18
Trim71-201ENSMUST00000111816 Brpf1B2RRD7 1212 aa22.41■■□□□ 1.18
Trim71-201ENSMUST00000111816 GorabQ8BRM2 368 aa22.41■■□□□ 1.18
Trim71-201ENSMUST00000111816 Tmf1B9EKI3 1091 aa22.4■■□□□ 1.18
Trim71-201ENSMUST00000111816 Aebp2Q9Z248 504 aaKnown RBP22.39■■□□□ 1.18
Trim71-201ENSMUST00000111816 U2surpQ6NV83 1029 aaKnown RBP22.39■■□□□ 1.18
Trim71-201ENSMUST00000111816 Dixdc1Q80Y83 711 aa22.38■■□□□ 1.17
Trim71-201ENSMUST00000111816 Necab1Q8BG18 352 aa22.38■■□□□ 1.17
Trim71-201ENSMUST00000111816 Tmx4Q8C0L0 335 aa22.38■■□□□ 1.17
Trim71-201ENSMUST00000111816 Kif4P33174 1231 aa22.37■■□□□ 1.17
Trim71-201ENSMUST00000111816 Cdkn1cP49919 348 aa22.37■■□□□ 1.17
Trim71-201ENSMUST00000111816 Cgnl1Q6AW69 1298 aa22.37■■□□□ 1.17
Trim71-201ENSMUST00000111816 Plagl1Q9JLQ4 704 aa22.36■■□□□ 1.17
Trim71-201ENSMUST00000111816 Tmco5bQ80X59 307 aa22.35■■□□□ 1.17
Trim71-201ENSMUST00000111816 Ddx11Q6AXC6 880 aa22.35■■□□□ 1.17
Trim71-201ENSMUST00000111816 Ccar1Q8CH18 1146 aaKnown RBP22.35■■□□□ 1.17
Trim71-201ENSMUST00000111816 Q3TQI7 289 aaKnown RBP22.34■■□□□ 1.17
Trim71-201ENSMUST00000111816 Cplx2P84086 134 aa22.34■■□□□ 1.17
Trim71-201ENSMUST00000111816 Eea1Q8BL66 1411 aa22.33■■□□□ 1.16
Trim71-201ENSMUST00000111816 Kif7B7ZNG0 1348 aa22.32■■□□□ 1.16
Trim71-201ENSMUST00000111816 Dhx8A2A4P0 1244 aaKnown RBP22.32■■□□□ 1.16
Trim71-201ENSMUST00000111816 Cep112Q5PR68 954 aa22.31■■□□□ 1.16
Trim71-201ENSMUST00000111816 Arglu1Q3UL36 271 aaKnown RBP22.31■■□□□ 1.16
Trim71-201ENSMUST00000111816 Stard8Q8K031 1019 aa22.3■■□□□ 1.16
Trim71-201ENSMUST00000111816 Chmp3Q9CQ10 224 aa22.3■■□□□ 1.16
Trim71-201ENSMUST00000111816 Ccdc83Q9D4V3 305 aa22.3■■□□□ 1.16
Trim71-201ENSMUST00000111816 Casq1O09165 405 aa22.29■■□□□ 1.16
Trim71-201ENSMUST00000111816 Speer4f1Q9D5Q6 258 aa22.28■■□□□ 1.16
Trim71-201ENSMUST00000111816 Chmp4cQ9D7F7 232 aa22.27■■□□□ 1.16
Trim71-201ENSMUST00000111816 Erlin2Q8BFZ9 340 aa22.27■■□□□ 1.16
Trim71-201ENSMUST00000111816 Pmfbp1Q9WVQ0 1022 aa22.27■■□□□ 1.16
Trim71-201ENSMUST00000111816 Gbp4Q61107 620 aa22.27■■□□□ 1.16
Trim71-201ENSMUST00000111816 Nap1l1P28656 391 aaKnown RBP22.26■■□□□ 1.15
Trim71-201ENSMUST00000111816 Phf14Q9D4H9 881 aa22.26■■□□□ 1.15
Trim71-201ENSMUST00000111816 Spata24Q6P926 205 aa22.26■■□□□ 1.15
Trim71-201ENSMUST00000111816 Gpatch3Q8BIY1 525 aa22.26■■□□□ 1.15
Trim71-201ENSMUST00000111816 Zscan21Q07231 555 aa22.25■■□□□ 1.15
Trim71-201ENSMUST00000111816 Rec8Q8C5S7 591 aa22.25■■□□□ 1.15
Trim71-201ENSMUST00000111816 Wdr78E9PYY5 807 aa22.25■■□□□ 1.15
Trim71-201ENSMUST00000111816 HdgfP51859 237 aaKnown RBP22.24■■□□□ 1.15
Trim71-201ENSMUST00000111816 Golga2Q921M4 999 aa22.24■■□□□ 1.15
Trim71-201ENSMUST00000111816 Sparcl1P70663 650 aa22.24■■□□□ 1.15
Trim71-201ENSMUST00000111816 Ncbp3Q8BZR9 615 aaKnown RBP22.24■■□□□ 1.15
Trim71-201ENSMUST00000111816 ChgaP26339 463 aaKnown RBP22.23■■□□□ 1.15
Trim71-201ENSMUST00000111816 Cplx1P63040 134 aa22.23■■□□□ 1.15
Trim71-201ENSMUST00000111816 ItpripQ3TNL8 555 aa22.22■■□□□ 1.15
Trim71-201ENSMUST00000111816 Dydc1Q9D9T0 175 aa22.22■■□□□ 1.15
Trim71-201ENSMUST00000111816 Paip2Q9D6V8 124 aa22.21■■□□□ 1.15
Trim71-201ENSMUST00000111816 Sept6Q9R1T4 434 aa22.21■■□□□ 1.15
Trim71-201ENSMUST00000111816 Rsph6aQ8CDR2 708 aa22.21■■□□□ 1.15
Trim71-201ENSMUST00000111816 CntlnA2AM05 1397 aa22.21■■□□□ 1.15
Trim71-201ENSMUST00000111816 KinQ8K339 391 aa22.19■■□□□ 1.14
Trim71-201ENSMUST00000111816 Cluap1Q8R3P7 413 aa22.18■■□□□ 1.14
Trim71-201ENSMUST00000111816 March6Q6ZQ89 909 aa22.18■■□□□ 1.14
Trim71-201ENSMUST00000111816 Bicd2Q921C5 820 aa22.17■■□□□ 1.14
Trim71-201ENSMUST00000111816 Smc2Q8CG48 1191 aaKnown RBP22.17■■□□□ 1.14
Trim71-201ENSMUST00000111816 Rabep1O35551 862 aa22.17■■□□□ 1.14
Trim71-201ENSMUST00000111816 A0A0U1RNP2 1173 aa22.17■■□□□ 1.14
Trim71-201ENSMUST00000111816 Rnf20Q5DTM8 973 aa22.16■■□□□ 1.14
Trim71-201ENSMUST00000111816 U2af1Q9D883 239 aaKnown RBP22.15■■□□□ 1.14
Trim71-201ENSMUST00000111816 Kiaa0753Q6A000 959 aa22.15■■□□□ 1.14
Trim71-201ENSMUST00000111816 Ppp4r3bQ922R5 820 aa22.14■■□□□ 1.13
Trim71-201ENSMUST00000111816 Tnnt1O88346 262 aa22.14■■□□□ 1.13
Trim71-201ENSMUST00000111816 Ubxn4Q8VCH8 506 aa22.14■■□□□ 1.13
Trim71-201ENSMUST00000111816 Cnga1P29974 684 aa22.13■■□□□ 1.13
Trim71-201ENSMUST00000111816 Luc7lQ9CYI4 371 aaKnown RBP22.13■■□□□ 1.13
Trim71-201ENSMUST00000111816 Trap1aP19473 224 aa22.13■■□□□ 1.13
Trim71-201ENSMUST00000111816 Stk24Q99KH8 431 aa22.12■■□□□ 1.13
Trim71-201ENSMUST00000111816 Ccdc18Q640L5 1455 aa22.12■■□□□ 1.13
Trim71-201ENSMUST00000111816 Samd1D3YXK1 519 aa22.11■■□□□ 1.13
Trim71-201ENSMUST00000111816 Polr3gQ6NXY9 223 aa22.1■■□□□ 1.13
Trim71-201ENSMUST00000111816 PhaxQ9JJT9 385 aaKnown RBP22.1■■□□□ 1.13
Trim71-201ENSMUST00000111816 PdiltQ9DAN1 588 aa22.09■■□□□ 1.13
Trim71-201ENSMUST00000111816 Lrrcc1Q69ZB0 1026 aa22.09■■□□□ 1.13
Trim71-201ENSMUST00000111816 Tmco3Q8BH01 678 aa22.08■■□□□ 1.13
Trim71-201ENSMUST00000111816 Ccar2Q8VDP4 922 aaKnown RBP22.08■■□□□ 1.13
Trim71-201ENSMUST00000111816 Map9Q3TRR0 646 aa22.08■■□□□ 1.13
Trim71-201ENSMUST00000111816 Ubl4bQ9CQ84 188 aa22.08■■□□□ 1.12
Trim71-201ENSMUST00000111816 Spag5Q7TME2 1165 aa22.07■■□□□ 1.12
Retrieved 100 of 22,080 RNA–protein pairs in 41.8 ms