RNA–Protein interactions for RNA: ENSMUST00000109543.8

Vcan-201, Transcript of Versican core protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vcan, Length 2,321 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vcan-201ENSMUST00000109543 Plekhg5Q66T02 1073 aa21.44■■□□□ 1.02
Vcan-201ENSMUST00000109543 Atp10dQ8K2X1 1416 aa21.44■■□□□ 1.02
Vcan-201ENSMUST00000109543 SafbD3YXK2 937 aaKnown RBP21.44■■□□□ 1.02
Vcan-201ENSMUST00000109543 Wwc2Q6NXJ0 1187 aa21.43■■□□□ 1.02
Vcan-201ENSMUST00000109543 Cd109Q8R422 1442 aa21.43■■□□□ 1.02
Vcan-201ENSMUST00000109543 Hecw1Q8K4P8 1604 aa21.42■■□□□ 1.02
Vcan-201ENSMUST00000109543 CenpbP27790 599 aa21.42■■□□□ 1.02
Vcan-201ENSMUST00000109543 Abca8bQ8K440 1620 aa21.42■■□□□ 1.02
Vcan-201ENSMUST00000109543 Abcc3B2RX12 1523 aa21.42■■□□□ 1.02
Vcan-201ENSMUST00000109543 Rock1P70335 1354 aa21.41■■□□□ 1.02
Vcan-201ENSMUST00000109543 Exoc6Q8R313 802 aa21.41■■□□□ 1.02
Vcan-201ENSMUST00000109543 Cpsf1Q9EPU4 1441 aaKnown RBP21.41■■□□□ 1.02
Vcan-201ENSMUST00000109543 RalgapbQ8BQZ4 1484 aa21.41■■□□□ 1.02
Vcan-201ENSMUST00000109543 Cdc42bpbQ7TT50 1713 aa21.4■■□□□ 1.02
Vcan-201ENSMUST00000109543 Atp7aQ64430 1491 aa21.39■■□□□ 1.02
Vcan-201ENSMUST00000109543 Polr3aB2RXC6 1390 aa21.39■■□□□ 1.01
Vcan-201ENSMUST00000109543 Slc4a2P13808 1237 aaKnown RBP21.39■■□□□ 1.01
Vcan-201ENSMUST00000109543 Ifnlr1Q8CGK5 535 aa21.39■■□□□ 1.01
Vcan-201ENSMUST00000109543 Iqgap1Q9JKF1 1657 aaKnown RBP21.38■■□□□ 1.01
Vcan-201ENSMUST00000109543 Spag9Q58A65 1321 aaKnown RBP21.38■■□□□ 1.01
Vcan-201ENSMUST00000109543 Washc2Q6PGL7 1334 aa21.37■■□□□ 1.01
Vcan-201ENSMUST00000109543 AI481877A2ALV5 1481 aa21.36■■□□□ 1.01
Vcan-201ENSMUST00000109543 Znf608Q56A10 1511 aa21.36■■□□□ 1.01
Vcan-201ENSMUST00000109543 Prdm16A2A935 1275 aa21.36■■□□□ 1.01
Vcan-201ENSMUST00000109543 Map3k5O35099 1380 aa21.34■■□□□ 1.01
Vcan-201ENSMUST00000109543 NrdcQ8BHG1 1161 aa21.34■■□□□ 1.01
Vcan-201ENSMUST00000109543 Tarbp1E9Q368 1579 aa21.32■■□□□ 1
Vcan-201ENSMUST00000109543 PnisrA2AJT4 805 aaKnown RBP21.31■■□□□ 1
Vcan-201ENSMUST00000109543 Pde4cQ3UEI1 686 aa21.31■■□□□ 1
Vcan-201ENSMUST00000109543 Igf1rQ60751 1373 aa21.31■■□□□ 1
Vcan-201ENSMUST00000109543 Rock2P70336 1388 aa21.3■■□□□ 1
Vcan-201ENSMUST00000109543 Kidins220E9Q9B7 1793 aa21.29■■□□□ 1
Vcan-201ENSMUST00000109543 Ythdc2B2RR83 1445 aaKnown RBP21.28■■□□□ 1
Vcan-201ENSMUST00000109543 Calr4Q3TQS0 420 aa21.26■□□□□ 0.99
Vcan-201ENSMUST00000109543 Ppip5k1A2ARP1 1436 aa21.26■□□□□ 0.99
Vcan-201ENSMUST00000109543 Robo2Q7TPD3 1470 aa21.26■□□□□ 0.99
Vcan-201ENSMUST00000109543 Usp54Q8BL06 1588 aaKnown RBP21.24■□□□□ 0.99
Vcan-201ENSMUST00000109543 Ifit1bl1D3Z6F0 470 aa21.23■□□□□ 0.99
Vcan-201ENSMUST00000109543 Eif5bQ05D44 1216 aaKnown RBP21.22■□□□□ 0.99
Vcan-201ENSMUST00000109543 Zbtb4Q5F293 982 aa21.22■□□□□ 0.99
Vcan-201ENSMUST00000109543 Cep170Q6A065 1588 aa21.22■□□□□ 0.99
Vcan-201ENSMUST00000109543 ShprhQ7TPQ3 1674 aa21.21■□□□□ 0.99
Vcan-201ENSMUST00000109543 Kif1bQ60575 1816 aaKnown RBP21.2■□□□□ 0.98
Vcan-201ENSMUST00000109543 Edc4Q3UJB9 1406 aaKnown RBP21.2■□□□□ 0.98
Vcan-201ENSMUST00000109543 Pelp1Q9DBD5 1123 aaKnown RBP21.2■□□□□ 0.98
Vcan-201ENSMUST00000109543 Abca17E9PX95 1733 aa21.19■□□□□ 0.98
Vcan-201ENSMUST00000109543 PtprtQ99M80 1454 aa21.19■□□□□ 0.98
Vcan-201ENSMUST00000109543 Adamts13Q769J6 1426 aa21.19■□□□□ 0.98
Vcan-201ENSMUST00000109543 Nsd2Q8BVE8 1365 aa21.18■□□□□ 0.98
Vcan-201ENSMUST00000109543 Mroh3A0A1D5RM54 893 aa21.18■□□□□ 0.98
Vcan-201ENSMUST00000109543 Xrn1P97789 1719 aaKnown RBP21.18■□□□□ 0.98
Vcan-201ENSMUST00000109543 Arid3cA6PWV5 409 aa21.17■□□□□ 0.98
Vcan-201ENSMUST00000109543 Zfyve16Q80U44 1528 aa21.17■□□□□ 0.98
Vcan-201ENSMUST00000109543 Erich6D3Z6S9 713 aa21.16■□□□□ 0.98
Vcan-201ENSMUST00000109543 Hdac5Q9Z2V6 1113 aa21.15■□□□□ 0.98
Vcan-201ENSMUST00000109543 Gapvd1Q6PAR5 1458 aa21.14■□□□□ 0.97
Vcan-201ENSMUST00000109543 Kdm5cP41230 1554 aa21.14■□□□□ 0.97
Vcan-201ENSMUST00000109543 Setd1aE9PYH6 1716 aa21.13■□□□□ 0.97
Vcan-201ENSMUST00000109543 Abca9Q8K449 1623 aa21.13■□□□□ 0.97
Vcan-201ENSMUST00000109543 Kif3bQ61771 747 aa21.12■□□□□ 0.97
Vcan-201ENSMUST00000109543 Lemd3Q9WU40 921 aa21.1■□□□□ 0.97
Vcan-201ENSMUST00000109543 Tulp4Q9JIL5 1547 aa21.1■□□□□ 0.97
Vcan-201ENSMUST00000109543 Nos1Q9Z0J4 1429 aa21.09■□□□□ 0.97
Vcan-201ENSMUST00000109543 P3h3Q8CG70 732 aa21.08■□□□□ 0.97
Vcan-201ENSMUST00000109543 Ylpm1Q9R0I7 1386 aaKnown RBP21.08■□□□□ 0.96
Vcan-201ENSMUST00000109543 Myo5cE9Q1F5 1742 aa21.07■□□□□ 0.96
Vcan-201ENSMUST00000109543 Tubgcp6G5E8P0 1769 aa21.07■□□□□ 0.96
Vcan-201ENSMUST00000109543 Sall3Q62255 1320 aa21.06■□□□□ 0.96
Vcan-201ENSMUST00000109543 Ofd1Q80Z25 1017 aa21.05■□□□□ 0.96
Vcan-201ENSMUST00000109543 Abcc6Q9R1S7 1498 aa21.05■□□□□ 0.96
Vcan-201ENSMUST00000109543 Anp32aO35381 247 aa21.04■□□□□ 0.96
Vcan-201ENSMUST00000109543 Kdm2aP59997 1161 aa21.03■□□□□ 0.96
Vcan-201ENSMUST00000109543 Rpgrip1lQ8CG73 1264 aa21.03■□□□□ 0.96
Vcan-201ENSMUST00000109543 Pank3Q8R2W9 370 aa21.03■□□□□ 0.96
Vcan-201ENSMUST00000109543 Znf518aB2RRF6 1478 aaKnown RBP21.02■□□□□ 0.96
Vcan-201ENSMUST00000109543 PrxO55103 1391 aa21.02■□□□□ 0.95
Vcan-201ENSMUST00000109543 Anp32bQ9EST5 272 aaKnown RBP21.01■□□□□ 0.95
Vcan-201ENSMUST00000109543 Ttc21bQ0HA38 1315 aa21.01■□□□□ 0.95
Vcan-201ENSMUST00000109543 Uggt2E9Q4X2 1504 aa21■□□□□ 0.95
Vcan-201ENSMUST00000109543 Fndc1E9Q043 1732 aa20.99■□□□□ 0.95
Vcan-201ENSMUST00000109543 Inpp5dQ9ES52 1191 aa20.98■□□□□ 0.95
Vcan-201ENSMUST00000109543 Abca6Q8K441 1624 aa20.98■□□□□ 0.95
Vcan-201ENSMUST00000109543 AnkarA2RT91 1465 aa20.98■□□□□ 0.95
Vcan-201ENSMUST00000109543 Srcin1Q9QWI6 1250 aa20.98■□□□□ 0.95
Vcan-201ENSMUST00000109543 Fam71e1A1L3C1 212 aa20.96■□□□□ 0.95
Vcan-201ENSMUST00000109543 Stk24Q99KH8 431 aa20.96■□□□□ 0.95
Vcan-201ENSMUST00000109543 ErbinQ80TH2 1402 aa20.95■□□□□ 0.94
Vcan-201ENSMUST00000109543 Tmem131lQ3U3D7 1597 aa20.95■□□□□ 0.94
Vcan-201ENSMUST00000109543 Os9Q8K2C7 672 aa20.95■□□□□ 0.94
Vcan-201ENSMUST00000109543 Q7TT23 1179 aa20.94■□□□□ 0.94
Vcan-201ENSMUST00000109543 Pabpn1Q8CCS6 302 aaKnown RBP20.94■□□□□ 0.94
Vcan-201ENSMUST00000109543 OvosQ3UU35 1456 aa20.93■□□□□ 0.94
Vcan-201ENSMUST00000109543 Tmf1B9EKI3 1091 aa20.93■□□□□ 0.94
Vcan-201ENSMUST00000109543 Nolc1E9Q5C9 702 aaKnown RBP20.93■□□□□ 0.94
Vcan-201ENSMUST00000109543 Zscan21Q07231 555 aa20.93■□□□□ 0.94
Vcan-201ENSMUST00000109543 Zscan10Q3URR7 782 aa20.93■□□□□ 0.94
Vcan-201ENSMUST00000109543 Iqgap3F8VQ29 1632 aa20.92■□□□□ 0.94
Vcan-201ENSMUST00000109543 Ttbk1Q6PCN3 1308 aa20.92■□□□□ 0.94
Vcan-201ENSMUST00000109543 Gm20521D3Z5F7 333 aa20.92■□□□□ 0.94
Vcan-201ENSMUST00000109543 Sbno1Q689Z5 1390 aa20.9■□□□□ 0.94
Retrieved 100 of 22,080 RNA–protein pairs in 73.3 ms