RNA–Protein interactions for RNA: ENSMUST00000101616.8

Smarca1-203, Transcript of Probable global transcription activator SNF2L1, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Smarca1, Length 3,991 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Smarca1-203ENSMUST00000101616 Rrp9Q91WM3 475 aaKnown RBP10.46□□□□□ -0.73
Smarca1-203ENSMUST00000101616 4933402E13RikQ9D4D2 429 aa10.46□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Chmp4cQ9D7F7 232 aa10.46□□□□□ -0.73
Smarca1-203ENSMUST00000101616 Rock1P70335 1354 aa10.46□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Ccdc146E9Q9F7 977 aa10.46□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Stk11ipQ3TAA7 1072 aa10.45□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Rock2P70336 1388 aa10.45□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Rsph3aQ3UFY4 516 aa10.45□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Plppr3Q7TPB0 716 aa10.45□□□□□ -0.74
Smarca1-203ENSMUST00000101616 IqubQ8CDK3 788 aa10.45□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Egfem1Q8C088 590 aa10.44□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Ccdc30Q8BVF4 654 aa10.44□□□□□ -0.74
Smarca1-203ENSMUST00000101616 CgnP59242 1191 aa10.43□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Gtf2e1Q9D0D5 440 aa10.43□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Rnf214Q8BFU3 668 aaKnown RBP10.43□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Ylpm1Q9R0I7 1386 aaKnown RBP10.42□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Rabep1O35551 862 aa10.42□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Zscan10Q3URR7 782 aa10.41□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Pibf1E9Q6K3 756 aa10.41□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Stk26Q99JT2 416 aa10.4□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Trim30aP15533 496 aa10.4□□□□□ -0.74
Smarca1-203ENSMUST00000101616 Ccdc60Q8C4J0 545 aa10.4□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Ankrd36D3Z4K0 1415 aa10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Eif4g1Q6NZJ6 1600 aaKnown RBP10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Adam1bQ8R534 806 aa10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Kif16bB1AVY7 1312 aa10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Nup155Q99P88 1391 aaKnown RBP10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Arap1Q4LDD4 1452 aa10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Ssh1Q76I79 1042 aa10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Nutm1Q8BHP2 1126 aa10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Ccar1Q8CH18 1146 aaKnown RBP10.39□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Trim58Q5NCC9 485 aa10.38□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Phf14Q9D4H9 881 aa10.38□□□□□ -0.75
Smarca1-203ENSMUST00000101616 DmtnQ9WV69 405 aa10.38□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Kif7B7ZNG0 1348 aa10.38□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Chmp4bQ9D8B3 224 aaKnown RBP10.38□□□□□ -0.75
Smarca1-203ENSMUST00000101616 UacaQ8CGB3 1411 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Naip1Q9QWK5 1403 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Fan1Q69ZT1 1020 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Tspyl2Q7TQI8 677 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 CrebrfQ8CDG5 640 aaKnown RBP10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 NgefQ8CHT1 710 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Pdia4P08003 638 aaKnown RBP10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Nol12Q8BG17 217 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Tsen2Q6P7W5 460 aa10.37□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Birc3O08863 600 aa10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Casq1O09165 405 aa10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 MccE9PWI3 1003 aa10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Fam184bQ0KK56 942 aa10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 HnrnpuQ8VEK3 800 aaKnown RBP10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Dhx29Q6PGC1 1365 aaKnown RBP10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Fam13bQ8K2H3 851 aa10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Tomm22Q9CPQ3 142 aa10.36□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Cc2d1aQ8K1A6 943 aa10.35□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Nectin2P32507 530 aa10.35□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Gm973E9Q295 1059 aa10.34□□□□□ -0.75
Smarca1-203ENSMUST00000101616 PtmsQ9D0J8 101 aaKnown RBP10.34□□□□□ -0.75
Smarca1-203ENSMUST00000101616 Ppp2r3aB2RXC8 1150 aa10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Ralbp1Q62172 648 aa10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Carmil1Q6EDY6 1374 aa10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 AampJ3QN89 436 aa10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Polr3gQ6NXY9 223 aa10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Utp3Q9JI13 469 aaKnown RBP10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Plekhh2Q8C115 1491 aa10.33□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Sptbn5F6UCX4 1208 aa10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Stard8Q8K031 1019 aa10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Pes1Q9EQ61 584 aaKnown RBP10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Phactr2B1AVP0 632 aa10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 PogkQ80TC5 607 aa10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 GsdmaQ9EST1 446 aa10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 TimelessQ9R1X4 1197 aa10.32□□□□□ -0.76
Smarca1-203ENSMUST00000101616 RdxP26043 583 aaKnown RBP10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Nek4Q9Z1J2 792 aa10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Vps8Q0P5W1 1427 aa10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Tnnt1O88346 262 aa10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 G3bp1P97855 465 aaKnown RBP10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Mcm4P49717 862 aa10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Plekhh1Q80TI1 1356 aa10.31□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Apaf1O88879 1249 aa10.3□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Tpm2P58774 284 aa10.3□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Sf3a1Q8K4Z5 791 aaKnown RBP10.3□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Gripap1Q8VD04 806 aa10.3□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Ppp2r1aQ76MZ3 589 aa10.29□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Iqgap2Q3UQ44 1575 aa10.29□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Cog6Q8R3I3 657 aa10.29□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Q4VA45 678 aa10.29□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Dhx9O70133 1380 aaKnown RBP10.29□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Eif4g2Q62448 906 aaKnown RBP10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Iffo2Q8R2V2 512 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Sh3bp5Q9Z131 463 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Wdr62Q3U3T8 1523 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Brpf1B2RRD7 1212 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Zfp777B9EKF4 885 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Triml2E9PW10 424 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Plekhg5Q66T02 1073 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Filip1lQ6P6L0 1131 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Rassf8Q8CJ96 419 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Atl3Q91YH5 541 aa10.28□□□□□ -0.76
Smarca1-203ENSMUST00000101616 Ppp1r9bQ6R891 817 aaKnown RBP10.27□□□□□ -0.77
Smarca1-203ENSMUST00000101616 Q9D2X8 372 aa10.27□□□□□ -0.77
Retrieved 100 of 22,080 RNA–protein pairs in 24.8 ms