RNA–Protein interactions for RNA: ENSMUST00000078680.12

Ush1c-202, Transcript of Harmonin, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ush1c, Length 2,047 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ush1c-202ENSMUST00000078680 Dennd4bQ3U1Y4 1499 aa21.38■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Znf518aB2RRF6 1478 aaKnown RBP21.37■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Xrn1P97789 1719 aaKnown RBP21.37■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Zmym4A2A791 1549 aaKnown RBP21.37■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Cdc42bpgQ80UW5 1551 aa21.37■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Kif3bQ61771 747 aa21.36■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Kif14L0N7N1 1674 aaKnown RBP21.36■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Zfp644E9QA22 1323 aa21.34■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Zbtb7cQ8VCZ7 619 aa21.34■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Naip6Q9JIB6 1403 aa21.33■■□□□ 1.01
Ush1c-202ENSMUST00000078680 Gli2Q0VGT2 1544 aa21.32■■□□□ 1
Ush1c-202ENSMUST00000078680 Alpk3Q924C5 1678 aa21.32■■□□□ 1
Ush1c-202ENSMUST00000078680 Ube2uB1AUC4 352 aa21.31■■□□□ 1
Ush1c-202ENSMUST00000078680 Ankrd36D3Z4K0 1415 aa21.31■■□□□ 1
Ush1c-202ENSMUST00000078680 AlkP97793 1621 aa21.31■■□□□ 1
Ush1c-202ENSMUST00000078680 Abca17E9PX95 1733 aa21.29■■□□□ 1
Ush1c-202ENSMUST00000078680 Usp54Q8BL06 1588 aaKnown RBP21.27■■□□□ 1
Ush1c-202ENSMUST00000078680 Adamtsl3G3UXC7 1706 aa21.27■■□□□ 1
Ush1c-202ENSMUST00000078680 Cfap65Q3V0B4 1847 aa21.26■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Nup155Q99P88 1391 aaKnown RBP21.26■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Trpm1Q2TV84 1622 aa21.26■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Topbp1Q6ZQF0 1515 aa21.25■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Plch2A2AP18 1501 aa21.24■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Map4P27546 1125 aaKnown RBP21.24■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Pde4cQ3UEI1 686 aa21.24■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Afap1Q80YS6 731 aa21.23■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Hnrnpul2Q00PI9 745 aaKnown RBP21.22■□□□□ 0.99
Ush1c-202ENSMUST00000078680 MlecQ6ZQI3 291 aaKnown RBP21.22■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Trpm2Q91YD4 1506 aa21.22■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Uggt2E9Q4X2 1504 aa21.21■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Clstn2Q9ER65 966 aa21.21■□□□□ 0.99
Ush1c-202ENSMUST00000078680 Eid3Q3V124 375 aa21.21■□□□□ 0.99
Ush1c-202ENSMUST00000078680 ShprhQ7TPQ3 1674 aa21.2■□□□□ 0.98
Ush1c-202ENSMUST00000078680 Camsap2Q8C1B1 1461 aa21.2■□□□□ 0.98
Ush1c-202ENSMUST00000078680 Ttll5Q8CHB8 1328 aa21.19■□□□□ 0.98
Ush1c-202ENSMUST00000078680 Safb2Q80YR5 991 aaKnown RBP21.17■□□□□ 0.98
Ush1c-202ENSMUST00000078680 Naip5Q9R016 1403 aa21.17■□□□□ 0.98
Ush1c-202ENSMUST00000078680 Mphosph9A6H5Y1 991 aa21.14■□□□□ 0.98
Ush1c-202ENSMUST00000078680 Kif1bQ60575 1816 aaKnown RBP21.13■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Tnnt3Q9QZ47 272 aa21.13■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Asxl1P59598 1514 aa21.13■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Ppargc1bQ8VHJ7 1014 aa21.12■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Trak1Q6PD31 939 aa21.11■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Myo5cE9Q1F5 1742 aa21.11■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Robo2Q7TPD3 1470 aa21.11■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Rsph4aQ8BYM7 716 aa21.1■□□□□ 0.97
Ush1c-202ENSMUST00000078680 Supt6hQ62383 1726 aaKnown RBP21.09■□□□□ 0.97
Ush1c-202ENSMUST00000078680 PtprgQ05909 1442 aa21.08■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Abca6Q8K441 1624 aa21.07■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Myom2Q14BI5 1463 aa21.06■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Prex1Q69ZK0 1650 aa21.06■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Myom3A2ABU4 1439 aa21.05■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Cd109Q8R422 1442 aa21.05■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Ttc21bQ0HA38 1315 aa21.04■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Ylpm1Q9R0I7 1386 aaKnown RBP21.04■□□□□ 0.96
Ush1c-202ENSMUST00000078680 CltcQ68FD5 1675 aaKnown RBP21.04■□□□□ 0.96
Ush1c-202ENSMUST00000078680 MyclP10166 368 aa21.03■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Talpid3E9PV87 1520 aa21.02■□□□□ 0.96
Ush1c-202ENSMUST00000078680 Lamc1P02468 1607 aaKnown RBP21.02■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Nsd2Q8BVE8 1365 aa21.01■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Arhgap23Q69ZH9 1483 aa21■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Tmem131lQ3U3D7 1597 aa20.99■□□□□ 0.95
Ush1c-202ENSMUST00000078680 AnkarA2RT91 1465 aa20.99■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Pkd2O35245 966 aa20.98■□□□□ 0.95
Ush1c-202ENSMUST00000078680 RictorQ6QI06 1708 aa20.98■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Hfm1D3Z4R1 1434 aa20.97■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Knl1Q66JQ7 1612 aa20.97■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Dhx9O70133 1380 aaKnown RBP20.96■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Atp7aQ64430 1491 aa20.96■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Adamts7Q68SA9 1657 aa20.96■□□□□ 0.95
Ush1c-202ENSMUST00000078680 Hspa5P20029 655 aaKnown RBP20.95■□□□□ 0.94
Ush1c-202ENSMUST00000078680 Kif21bQ9QXL1 1668 aa20.93■□□□□ 0.94
Ush1c-202ENSMUST00000078680 Gm38655A0A286YDK6 273 aa20.92■□□□□ 0.94
Ush1c-202ENSMUST00000078680 Gm13697A2AK42 830 aa20.92■□□□□ 0.94
Ush1c-202ENSMUST00000078680 Med14A2ABV5 1459 aaKnown RBP20.92■□□□□ 0.94
Ush1c-202ENSMUST00000078680 PtprmP28828 1452 aa20.92■□□□□ 0.94
Ush1c-202ENSMUST00000078680 Erich6D3Z6S9 713 aa20.9■□□□□ 0.94
Ush1c-202ENSMUST00000078680 4930407I10RikD3Z5T8 1512 aa20.89■□□□□ 0.93
Ush1c-202ENSMUST00000078680 Dip2bQ3UH60 1574 aa20.89■□□□□ 0.93
Ush1c-202ENSMUST00000078680 Edc4Q3UJB9 1406 aaKnown RBP20.87■□□□□ 0.93
Ush1c-202ENSMUST00000078680 Brwd3A2AHJ4 1799 aa20.86■□□□□ 0.93
Ush1c-202ENSMUST00000078680 Akap12Q9WTQ5 1684 aa20.86■□□□□ 0.93
Ush1c-202ENSMUST00000078680 Tarbp1E9Q368 1579 aa20.85■□□□□ 0.93
Ush1c-202ENSMUST00000078680 Rprd2Q6NXI6 1469 aaKnown RBP20.83■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Abcc6Q9R1S7 1498 aa20.83■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Ahdc1Q6PAL7 1594 aaKnown RBP20.83■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Iqgap3F8VQ29 1632 aa20.82■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Tecpr2Q3UH45 1423 aa20.82■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Ercc6l2Q9JIM3 1537 aa20.82■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Ino80Q6ZPV2 1559 aa20.82■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Stra8P70278 393 aa20.82■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Stk24Q99KH8 431 aa20.82■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Skint5A7XUY5 1461 aa20.81■□□□□ 0.92
Ush1c-202ENSMUST00000078680 DroshaQ5HZJ0 1373 aaKnown RBP20.81■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Pik3c2gO70167 1506 aa20.8■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Bcl9Q9D219 1425 aa20.8■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Adgrb3Q80ZF8 1522 aa20.8■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Sall3Q62255 1320 aa20.79■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Usp47Q8BY87 1376 aa20.78■□□□□ 0.92
Ush1c-202ENSMUST00000078680 Dot1lQ6XZL8 1540 aa20.78■□□□□ 0.92
Retrieved 100 of 22,080 RNA–protein pairs in 46 ms