RNA–Protein interactions for RNA: ENSMUST00000056931.13

Ldb1-202, Transcript of LIM domain-binding protein 1, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Ldb1, Length 2,295 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb1-202ENSMUST00000056931 Xrn1P97789 1719 aaKnown RBP28.28■■■□□ 2.12
Ldb1-202ENSMUST00000056931 Gm38655A0A286YDK6 273 aa28.27■■■□□ 2.12
Ldb1-202ENSMUST00000056931 Clasp1Q80TV8 1535 aaKnown RBP28.27■■■□□ 2.12
Ldb1-202ENSMUST00000056931 Rprd2Q6NXI6 1469 aaKnown RBP28.27■■■□□ 2.12
Ldb1-202ENSMUST00000056931 Hnrnpul2Q00PI9 745 aaKnown RBP28.26■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Ttbk1Q6PCN3 1308 aa28.24■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Clstn2Q9ER65 966 aa28.23■■■□□ 2.11
Ldb1-202ENSMUST00000056931 OvosQ3UU35 1456 aa28.23■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Usp54Q8BL06 1588 aaKnown RBP28.22■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Pik3c2gO70167 1506 aa28.22■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Abca17E9PX95 1733 aa28.22■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Stra8P70278 393 aa28.21■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Nos1Q9Z0J4 1429 aa28.21■■■□□ 2.11
Ldb1-202ENSMUST00000056931 PtprgQ05909 1442 aa28.21■■■□□ 2.11
Ldb1-202ENSMUST00000056931 AglF8VPN4 1532 aa28.2■■■□□ 2.11
Ldb1-202ENSMUST00000056931 Pde4cQ3UEI1 686 aa28.18■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Ptch1Q61115 1434 aa28.18■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Gm13697A2AK42 830 aa28.17■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Kif14L0N7N1 1674 aaKnown RBP28.17■■■□□ 2.1
Ldb1-202ENSMUST00000056931 ShprhQ7TPQ3 1674 aa28.17■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Kdm5cP41230 1554 aa28.17■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Ttc37F8VPK0 1563 aa28.16■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Cd109Q8R422 1442 aa28.15■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Kif3bQ61771 747 aa28.15■■■□□ 2.1
Ldb1-202ENSMUST00000056931 Camsap2Q8C1B1 1461 aa28.13■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Kif1bQ60575 1816 aaKnown RBP28.12■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Robo2Q7TPD3 1470 aa28.09■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Rgl3Q3UYI5 709 aa28.09■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Znf710Q3U288 666 aa28.08■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Znf518aB2RRF6 1478 aaKnown RBP28.08■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Atp7aQ64430 1491 aa28.08■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Atp10aO54827 1508 aa28.08■■■□□ 2.09
Ldb1-202ENSMUST00000056931 Mapk8ip2Q9ERE9 830 aa28.07■■■□□ 2.08
Ldb1-202ENSMUST00000056931 Myo5cE9Q1F5 1742 aa28.05■■■□□ 2.08
Ldb1-202ENSMUST00000056931 Dip2cE9PWR4 1557 aa28.05■■■□□ 2.08
Ldb1-202ENSMUST00000056931 Dot1lQ6XZL8 1540 aa28.04■■■□□ 2.08
Ldb1-202ENSMUST00000056931 Kiaa0556Q8C753 1610 aa28.04■■■□□ 2.08
Ldb1-202ENSMUST00000056931 RereQ80TZ9 1558 aa28.02■■■□□ 2.08
Ldb1-202ENSMUST00000056931 SafbD3YXK2 937 aaKnown RBP28.01■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Myom3A2ABU4 1439 aa28.01■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Cul9Q80TT8 1865 aa28■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Yeats2Q3TUF7 1407 aa27.98■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Gli2Q0VGT2 1544 aa27.97■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Tarbp1E9Q368 1579 aa27.97■■■□□ 2.07
Ldb1-202ENSMUST00000056931 DroshaQ5HZJ0 1373 aaKnown RBP27.95■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Fndc1E9Q043 1732 aa27.95■■■□□ 2.07
Ldb1-202ENSMUST00000056931 Abca6Q8K441 1624 aa27.94■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Naip6Q9JIB6 1403 aa27.94■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Cdc42bpgQ80UW5 1551 aa27.93■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Topbp1Q6ZQF0 1515 aa27.93■■■□□ 2.06
Ldb1-202ENSMUST00000056931 AdgbG3UZ78 1657 aa27.92■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Sin3aQ60520 1274 aaKnown RBP27.92■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Nsd2Q8BVE8 1365 aa27.92■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Washc2Q6PGL7 1334 aa27.91■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Edc4Q3UJB9 1406 aaKnown RBP27.89■■■□□ 2.06
Ldb1-202ENSMUST00000056931 Erich6D3Z6S9 713 aa27.89■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Plch2A2AP18 1501 aa27.88■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Grwd1Q810D6 446 aaKnown RBP27.88■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Ylpm1Q9R0I7 1386 aaKnown RBP27.88■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Hecw2Q6I6G8 1578 aa27.88■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Synj2Q9D2G5 1434 aa27.88■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Rock1P70335 1354 aa27.87■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Prex1Q69ZK0 1650 aa27.86■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Fam71e1A1L3C1 212 aa27.85■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Mbd5B1AYB6 1498 aa27.85■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Ttc21bQ0HA38 1315 aa27.84■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Cfap65Q3V0B4 1847 aa27.83■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Tmem131lQ3U3D7 1597 aa27.83■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Smg6P61406 1418 aaKnown RBP27.83■■■□□ 2.05
Ldb1-202ENSMUST00000056931 AnkarA2RT91 1465 aa27.83■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Mug2P28666 1451 aa27.83■■■□□ 2.05
Ldb1-202ENSMUST00000056931 Dnajc5P60904 198 aa27.81■■■□□ 2.04
Ldb1-202ENSMUST00000056931 Uggt2E9Q4X2 1504 aa27.79■■■□□ 2.04
Ldb1-202ENSMUST00000056931 Cdk13Q69ZA1 1511 aaKnown RBP27.79■■■□□ 2.04
Ldb1-202ENSMUST00000056931 Ppip5k1A2ARP1 1436 aa27.79■■■□□ 2.04
Ldb1-202ENSMUST00000056931 Sall3Q62255 1320 aa27.78■■■□□ 2.04
Ldb1-202ENSMUST00000056931 Anp32aO35381 247 aa27.77■■■□□ 2.04
Ldb1-202ENSMUST00000056931 Dapk1Q80YE7 1442 aa27.76■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Iqgap1Q9JKF1 1657 aaKnown RBP27.76■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Trpm1Q2TV84 1622 aa27.75■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Rundc1Q0VDN7 615 aa27.72■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Dnajc5gQ8C632 165 aa27.72■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Mroh3A0A1D5RM54 893 aa27.71■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Iqgap3F8VQ29 1632 aa27.71■■■□□ 2.03
Ldb1-202ENSMUST00000056931 Adamts13Q769J6 1426 aa27.7■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Qser1A2BIE1 1698 aa27.7■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Stk24Q99KH8 431 aa27.69■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Polr3aB2RXC6 1390 aa27.69■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Ifit1bl1D3Z6F0 470 aa27.69■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Cpsf1Q9EPU4 1441 aaKnown RBP27.68■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Calr4Q3TQS0 420 aa27.67■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Abcc6Q9R1S7 1498 aa27.65■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Card11Q8CIS0 1159 aa27.64■■■□□ 2.02
Ldb1-202ENSMUST00000056931 Tulp4Q9JIL5 1547 aa27.64■■■□□ 2.02
Ldb1-202ENSMUST00000056931 ErbinQ80TH2 1402 aa27.63■■■□□ 2.01
Ldb1-202ENSMUST00000056931 Hdac5Q9Z2V6 1113 aa27.63■■■□□ 2.01
Ldb1-202ENSMUST00000056931 NpatQ8BMA5 1420 aa27.6■■■□□ 2.01
Ldb1-202ENSMUST00000056931 Plppr3Q7TPB0 716 aa27.6■■■□□ 2.01
Ldb1-202ENSMUST00000056931 Afap1Q80YS6 731 aa27.6■■■□□ 2.01
Ldb1-202ENSMUST00000056931 RalgapbQ8BQZ4 1484 aa27.6■■■□□ 2.01
Retrieved 100 of 22,080 RNA–protein pairs in 15 ms