RNA–Protein interactions for RNA: ENSMUST00000055262.12

Vti1b-201, Transcript of Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Vti1b, Length 1,490 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1b-201ENSMUST00000055262 Uggt2E9Q4X2 1504 aa27.74■■■□□ 2.03
Vti1b-201ENSMUST00000055262 PtprmP28828 1452 aa27.74■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Talpid3E9PV87 1520 aa27.72■■■□□ 2.03
Vti1b-201ENSMUST00000055262 NclP09405 707 aaKnown RBP27.72■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Usp54Q8BL06 1588 aaKnown RBP27.72■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Myom2Q14BI5 1463 aa27.71■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Abca6Q8K441 1624 aa27.71■■■□□ 2.03
Vti1b-201ENSMUST00000055262 Fhad1A6PWD2 1420 aa27.69■■■□□ 2.02
Vti1b-201ENSMUST00000055262 Trpm2Q91YD4 1506 aa27.68■■■□□ 2.02
Vti1b-201ENSMUST00000055262 Vps8Q0P5W1 1427 aa27.66■■■□□ 2.02
Vti1b-201ENSMUST00000055262 Cyb5rlB1AS42 316 aa27.64■■■□□ 2.02
Vti1b-201ENSMUST00000055262 CltcQ68FD5 1675 aaKnown RBP27.64■■■□□ 2.02
Vti1b-201ENSMUST00000055262 Naip5Q9R016 1403 aa27.63■■■□□ 2.01
Vti1b-201ENSMUST00000055262 ShprhQ7TPQ3 1674 aa27.59■■■□□ 2.01
Vti1b-201ENSMUST00000055262 Hnrnpul2Q00PI9 745 aaKnown RBP27.58■■■□□ 2.01
Vti1b-201ENSMUST00000055262 Rsph4aQ8BYM7 716 aa27.58■■■□□ 2.01
Vti1b-201ENSMUST00000055262 Mier1Q5UAK0 511 aa27.57■■■□□ 2
Vti1b-201ENSMUST00000055262 RictorQ6QI06 1708 aa27.57■■■□□ 2
Vti1b-201ENSMUST00000055262 Ahdc1Q6PAL7 1594 aaKnown RBP27.54■■■□□ 2
Vti1b-201ENSMUST00000055262 Myo5cE9Q1F5 1742 aa27.54■■■□□ 2
Vti1b-201ENSMUST00000055262 Dip2bQ3UH60 1574 aa27.54■■■□□ 2
Vti1b-201ENSMUST00000055262 4930407I10RikD3Z5T8 1512 aa27.53■■■□□ 2
Vti1b-201ENSMUST00000055262 Knl1Q66JQ7 1612 aa27.53■■■□□ 2
Vti1b-201ENSMUST00000055262 Pde4cQ3UEI1 686 aa27.52■■■□□ 2
Vti1b-201ENSMUST00000055262 AlkP97793 1621 aa27.52■■■□□ 2
Vti1b-201ENSMUST00000055262 Kif1bQ60575 1816 aaKnown RBP27.5■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Nup155Q99P88 1391 aaKnown RBP27.49■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Zfp644E9QA22 1323 aa27.49■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Prex1Q69ZK0 1650 aa27.49■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Arhgap23Q69ZH9 1483 aa27.49■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Ube2uB1AUC4 352 aa27.49■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Gm13697A2AK42 830 aa27.48■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Clstn2Q9ER65 966 aa27.46■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Ercc6l2Q9JIM3 1537 aa27.46■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Map4P27546 1125 aaKnown RBP27.45■■□□□ 1.99
Vti1b-201ENSMUST00000055262 Med14A2ABV5 1459 aaKnown RBP27.41■■□□□ 1.98
Vti1b-201ENSMUST00000055262 Topaz1E5FYH1 1653 aa27.4■■□□□ 1.98
Vti1b-201ENSMUST00000055262 Ccer2J3QPU5 274 aa27.4■■□□□ 1.98
Vti1b-201ENSMUST00000055262 Hfm1D3Z4R1 1434 aa27.39■■□□□ 1.98
Vti1b-201ENSMUST00000055262 Adamts7Q68SA9 1657 aa27.39■■□□□ 1.98
Vti1b-201ENSMUST00000055262 Asxl1P59598 1514 aa27.39■■□□□ 1.98
Vti1b-201ENSMUST00000055262 Bcl9Q9D219 1425 aa27.36■■□□□ 1.97
Vti1b-201ENSMUST00000055262 Robo2Q7TPD3 1470 aa27.35■■□□□ 1.97
Vti1b-201ENSMUST00000055262 Abcc6Q9R1S7 1498 aa27.35■■□□□ 1.97
Vti1b-201ENSMUST00000055262 Ttll5Q8CHB8 1328 aa27.32■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Tmem131lQ3U3D7 1597 aa27.31■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Ylpm1Q9R0I7 1386 aaKnown RBP27.3■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Ttc21bQ0HA38 1315 aa27.3■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Myom3A2ABU4 1439 aa27.29■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Lamc1P02468 1607 aaKnown RBP27.29■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Nsd2Q8BVE8 1365 aa27.28■■□□□ 1.96
Vti1b-201ENSMUST00000055262 AnkarA2RT91 1465 aa27.27■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Akap12Q9WTQ5 1684 aa27.27■■□□□ 1.96
Vti1b-201ENSMUST00000055262 Cd109Q8R422 1442 aa27.26■■□□□ 1.95
Vti1b-201ENSMUST00000055262 Scn4aQ9ER60 1841 aa27.24■■□□□ 1.95
Vti1b-201ENSMUST00000055262 Dip2aQ8BWT5 1523 aa27.22■■□□□ 1.95
Vti1b-201ENSMUST00000055262 Kif21bQ9QXL1 1668 aa27.22■■□□□ 1.95
Vti1b-201ENSMUST00000055262 Mphosph9A6H5Y1 991 aa27.22■■□□□ 1.95
Vti1b-201ENSMUST00000055262 Adgrb3Q80ZF8 1522 aa27.22■■□□□ 1.95
Vti1b-201ENSMUST00000055262 Trak1Q6PD31 939 aa27.21■■□□□ 1.95
Vti1b-201ENSMUST00000055262 PtprgQ05909 1442 aa27.21■■□□□ 1.95
Vti1b-201ENSMUST00000055262 GphnQ8BUV3 769 aaKnown RBP27.17■■□□□ 1.94
Vti1b-201ENSMUST00000055262 Erich6D3Z6S9 713 aa27.15■■□□□ 1.94
Vti1b-201ENSMUST00000055262 Ino80Q6ZPV2 1559 aa27.14■■□□□ 1.94
Vti1b-201ENSMUST00000055262 Ankrd36D3Z4K0 1415 aa27.12■■□□□ 1.93
Vti1b-201ENSMUST00000055262 Skint5A7XUY5 1461 aa27.11■■□□□ 1.93
Vti1b-201ENSMUST00000055262 Atp7aQ64430 1491 aa27.1■■□□□ 1.93
Vti1b-201ENSMUST00000055262 Iqgap3F8VQ29 1632 aa27.09■■□□□ 1.93
Vti1b-201ENSMUST00000055262 Acin1Q9JIX8 1338 aaKnown RBP27.08■■□□□ 1.93
Vti1b-201ENSMUST00000055262 Chd2E9PZM4 1827 aaKnown RBP27.08■■□□□ 1.93
Vti1b-201ENSMUST00000055262 Rimbp3Q3V0F0 1606 aa27.07■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Tarbp1E9Q368 1579 aa27.07■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Pip4k2bQ80XI4 416 aa27.06■■□□□ 1.92
Vti1b-201ENSMUST00000055262 DroshaQ5HZJ0 1373 aaKnown RBP27.05■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Ncoa1P70365 1447 aa27.05■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Tecpr2Q3UH45 1423 aa27.05■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Kdm5aQ3UXZ9 1690 aa27.04■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Efcab6Q6P1E8 1516 aa27.04■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Scaf11E9PZM7 1456 aaKnown RBP27.03■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Kif13aQ9EQW7 1749 aa27.03■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Phlpp1Q8CHE4 1687 aa27.03■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Prdm2A2A7B5 1709 aaKnown RBP27.03■■□□□ 1.92
Vti1b-201ENSMUST00000055262 Itsn1Q9Z0R4 1714 aa27.01■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Stk24Q99KH8 431 aa27.01■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Pkd2O35245 966 aa27■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Ltbp4Q8K4G1 1666 aa27■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Rims2Q9EQZ7 1530 aa26.99■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Dhx9O70133 1380 aaKnown RBP26.99■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Arid4bA2CG63 1314 aaKnown RBP26.98■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Uggt1Q6P5E4 1551 aa26.98■■□□□ 1.91
Vti1b-201ENSMUST00000055262 ErbinQ80TH2 1402 aa26.97■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Naip7Q9JIB3 1402 aa26.97■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Edc4Q3UJB9 1406 aaKnown RBP26.96■■□□□ 1.91
Vti1b-201ENSMUST00000055262 Eid3Q3V124 375 aa26.94■■□□□ 1.9
Vti1b-201ENSMUST00000055262 Mapk8ip2Q9ERE9 830 aa26.94■■□□□ 1.9
Vti1b-201ENSMUST00000055262 Hdac5Q9Z2V6 1113 aa26.94■■□□□ 1.9
Vti1b-201ENSMUST00000055262 Txndc2Q6P902 515 aa26.93■■□□□ 1.9
Vti1b-201ENSMUST00000055262 Pik3c2gO70167 1506 aa26.91■■□□□ 1.9
Vti1b-201ENSMUST00000055262 Abca8aQ8K442 1620 aa26.91■■□□□ 1.9
Vti1b-201ENSMUST00000055262 Sall3Q62255 1320 aa26.91■■□□□ 1.9
Retrieved 100 of 22,080 RNA–protein pairs in 67.2 ms