RNA–Protein interactions for RNA: ENSMUST00000028062.7

Vim-201, Transcript of Vimentin, mousemouse

APPRIS P2 TSL 1 (best) BASIC

Gene Vim, Length 2,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Vim-201ENSMUST00000028062 Iqgap1Q9JKF1 1657 aaKnown RBP22.58■■□□□ 1.21
Vim-201ENSMUST00000028062 Polr3aB2RXC6 1390 aa22.57■■□□□ 1.2
Vim-201ENSMUST00000028062 CenpbP27790 599 aa22.56■■□□□ 1.2
Vim-201ENSMUST00000028062 Card11Q8CIS0 1159 aa22.55■■□□□ 1.2
Vim-201ENSMUST00000028062 Cdk13Q69ZA1 1511 aaKnown RBP22.55■■□□□ 1.2
Vim-201ENSMUST00000028062 Prdm16A2A935 1275 aa22.54■■□□□ 1.2
Vim-201ENSMUST00000028062 Atp10dQ8K2X1 1416 aa22.54■■□□□ 1.2
Vim-201ENSMUST00000028062 Cdc42bpbQ7TT50 1713 aa22.52■■□□□ 1.2
Vim-201ENSMUST00000028062 Cd109Q8R422 1442 aa22.52■■□□□ 1.2
Vim-201ENSMUST00000028062 Rock2P70336 1388 aa22.52■■□□□ 1.2
Vim-201ENSMUST00000028062 Ppip5k1A2ARP1 1436 aa22.51■■□□□ 1.19
Vim-201ENSMUST00000028062 Mrs2Q5NCE8 434 aa22.5■■□□□ 1.19
Vim-201ENSMUST00000028062 Atp7aQ64430 1491 aa22.5■■□□□ 1.19
Vim-201ENSMUST00000028062 AI481877A2ALV5 1481 aa22.49■■□□□ 1.19
Vim-201ENSMUST00000028062 Igf1rQ60751 1373 aa22.48■■□□□ 1.19
Vim-201ENSMUST00000028062 Robo2Q7TPD3 1470 aa22.48■■□□□ 1.19
Vim-201ENSMUST00000028062 Grwd1Q810D6 446 aaKnown RBP22.46■■□□□ 1.19
Vim-201ENSMUST00000028062 Slc4a2P13808 1237 aaKnown RBP22.46■■□□□ 1.19
Vim-201ENSMUST00000028062 PnisrA2AJT4 805 aaKnown RBP22.45■■□□□ 1.18
Vim-201ENSMUST00000028062 Spag9Q58A65 1321 aaKnown RBP22.45■■□□□ 1.18
Vim-201ENSMUST00000028062 Exoc6Q8R313 802 aa22.45■■□□□ 1.18
Vim-201ENSMUST00000028062 Washc2Q6PGL7 1334 aa22.45■■□□□ 1.18
Vim-201ENSMUST00000028062 Wwc2Q6NXJ0 1187 aa22.43■■□□□ 1.18
Vim-201ENSMUST00000028062 Tarbp1E9Q368 1579 aa22.43■■□□□ 1.18
Vim-201ENSMUST00000028062 Kidins220E9Q9B7 1793 aa22.43■■□□□ 1.18
Vim-201ENSMUST00000028062 Slc24a1Q91WD8 1130 aa22.41■■□□□ 1.18
Vim-201ENSMUST00000028062 Gapvd1Q6PAR5 1458 aa22.4■■□□□ 1.18
Vim-201ENSMUST00000028062 Gm38655A0A286YDK6 273 aa22.4■■□□□ 1.18
Vim-201ENSMUST00000028062 SafbD3YXK2 937 aaKnown RBP22.4■■□□□ 1.18
Vim-201ENSMUST00000028062 NrdcQ8BHG1 1161 aa22.4■■□□□ 1.18
Vim-201ENSMUST00000028062 Abca17E9PX95 1733 aa22.4■■□□□ 1.18
Vim-201ENSMUST00000028062 Cep170Q6A065 1588 aa22.39■■□□□ 1.17
Vim-201ENSMUST00000028062 Setd1aE9PYH6 1716 aa22.38■■□□□ 1.17
Vim-201ENSMUST00000028062 Hdac5Q9Z2V6 1113 aa22.38■■□□□ 1.17
Vim-201ENSMUST00000028062 Pde4cQ3UEI1 686 aa22.37■■□□□ 1.17
Vim-201ENSMUST00000028062 Zbtb7cQ8VCZ7 619 aa22.37■■□□□ 1.17
Vim-201ENSMUST00000028062 Znf608Q56A10 1511 aa22.36■■□□□ 1.17
Vim-201ENSMUST00000028062 Usp54Q8BL06 1588 aaKnown RBP22.36■■□□□ 1.17
Vim-201ENSMUST00000028062 ShprhQ7TPQ3 1674 aa22.35■■□□□ 1.17
Vim-201ENSMUST00000028062 Kif1bQ60575 1816 aaKnown RBP22.35■■□□□ 1.17
Vim-201ENSMUST00000028062 Ythdc2B2RR83 1445 aaKnown RBP22.34■■□□□ 1.17
Vim-201ENSMUST00000028062 Nsd2Q8BVE8 1365 aa22.34■■□□□ 1.17
Vim-201ENSMUST00000028062 Map3k5O35099 1380 aa22.34■■□□□ 1.17
Vim-201ENSMUST00000028062 Calr4Q3TQS0 420 aa22.33■■□□□ 1.17
Vim-201ENSMUST00000028062 Edc4Q3UJB9 1406 aaKnown RBP22.33■■□□□ 1.17
Vim-201ENSMUST00000028062 Adamts13Q769J6 1426 aa22.33■■□□□ 1.16
Vim-201ENSMUST00000028062 Zfyve16Q80U44 1528 aa22.3■■□□□ 1.16
Vim-201ENSMUST00000028062 Xrn1P97789 1719 aaKnown RBP22.3■■□□□ 1.16
Vim-201ENSMUST00000028062 Kdm5cP41230 1554 aa22.29■■□□□ 1.16
Vim-201ENSMUST00000028062 Tubgcp6G5E8P0 1769 aa22.28■■□□□ 1.16
Vim-201ENSMUST00000028062 Abca9Q8K449 1623 aa22.25■■□□□ 1.15
Vim-201ENSMUST00000028062 PtprtQ99M80 1454 aa22.25■■□□□ 1.15
Vim-201ENSMUST00000028062 Nos1Q9Z0J4 1429 aa22.24■■□□□ 1.15
Vim-201ENSMUST00000028062 Ifit1bl1D3Z6F0 470 aa22.23■■□□□ 1.15
Vim-201ENSMUST00000028062 Ylpm1Q9R0I7 1386 aaKnown RBP22.23■■□□□ 1.15
Vim-201ENSMUST00000028062 Tulp4Q9JIL5 1547 aa22.23■■□□□ 1.15
Vim-201ENSMUST00000028062 Myo5cE9Q1F5 1742 aa22.21■■□□□ 1.15
Vim-201ENSMUST00000028062 Mroh3A0A1D5RM54 893 aa22.2■■□□□ 1.14
Vim-201ENSMUST00000028062 Uggt2E9Q4X2 1504 aa22.19■■□□□ 1.14
Vim-201ENSMUST00000028062 Anp32aO35381 247 aa22.16■■□□□ 1.14
Vim-201ENSMUST00000028062 Ifnlr1Q8CGK5 535 aa22.16■■□□□ 1.14
Vim-201ENSMUST00000028062 Abcc6Q9R1S7 1498 aa22.16■■□□□ 1.14
Vim-201ENSMUST00000028062 Znf518aB2RRF6 1478 aaKnown RBP22.16■■□□□ 1.14
Vim-201ENSMUST00000028062 Lemd3Q9WU40 921 aa22.15■■□□□ 1.14
Vim-201ENSMUST00000028062 Zmym4A2A791 1549 aaKnown RBP22.14■■□□□ 1.14
Vim-201ENSMUST00000028062 Tmem131lQ3U3D7 1597 aa22.14■■□□□ 1.14
Vim-201ENSMUST00000028062 Fndc1E9Q043 1732 aa22.14■■□□□ 1.13
Vim-201ENSMUST00000028062 AnkarA2RT91 1465 aa22.13■■□□□ 1.13
Vim-201ENSMUST00000028062 Eif5bQ05D44 1216 aaKnown RBP22.12■■□□□ 1.13
Vim-201ENSMUST00000028062 Anp32bQ9EST5 272 aaKnown RBP22.12■■□□□ 1.13
Vim-201ENSMUST00000028062 Sbno1Q689Z5 1390 aa22.11■■□□□ 1.13
Vim-201ENSMUST00000028062 Kif3bQ61771 747 aa22.11■■□□□ 1.13
Vim-201ENSMUST00000028062 Arid4bA2CG63 1314 aaKnown RBP22.11■■□□□ 1.13
Vim-201ENSMUST00000028062 Ofd1Q80Z25 1017 aa22.09■■□□□ 1.13
Vim-201ENSMUST00000028062 Pola1P33609 1465 aa22.09■■□□□ 1.13
Vim-201ENSMUST00000028062 PrxO55103 1391 aa22.09■■□□□ 1.13
Vim-201ENSMUST00000028062 Plch2A2AP18 1501 aa22.08■■□□□ 1.13
Vim-201ENSMUST00000028062 Ttc21bQ0HA38 1315 aa22.08■■□□□ 1.12
Vim-201ENSMUST00000028062 Topbp1Q6ZQF0 1515 aa22.07■■□□□ 1.12
Vim-201ENSMUST00000028062 Abca6Q8K441 1624 aa22.07■■□□□ 1.12
Vim-201ENSMUST00000028062 Arid3cA6PWV5 409 aa22.06■■□□□ 1.12
Vim-201ENSMUST00000028062 Iqgap3F8VQ29 1632 aa22.06■■□□□ 1.12
Vim-201ENSMUST00000028062 Rpgrip1lQ8CG73 1264 aa22.05■■□□□ 1.12
Vim-201ENSMUST00000028062 Pelp1Q9DBD5 1123 aaKnown RBP22.05■■□□□ 1.12
Vim-201ENSMUST00000028062 Pank3Q8R2W9 370 aa22.05■■□□□ 1.12
Vim-201ENSMUST00000028062 Erich6D3Z6S9 713 aa22.04■■□□□ 1.12
Vim-201ENSMUST00000028062 Cep152A2AUM9 1736 aaKnown RBP22.04■■□□□ 1.12
Vim-201ENSMUST00000028062 Srcin1Q9QWI6 1250 aa22.04■■□□□ 1.12
Vim-201ENSMUST00000028062 Zscan21Q07231 555 aa22.03■■□□□ 1.12
Vim-201ENSMUST00000028062 OvosQ3UU35 1456 aa22.03■■□□□ 1.12
Vim-201ENSMUST00000028062 ErbinQ80TH2 1402 aa22.02■■□□□ 1.12
Vim-201ENSMUST00000028062 Abca8aQ8K442 1620 aa22.02■■□□□ 1.12
Vim-201ENSMUST00000028062 Sall3Q62255 1320 aa22.02■■□□□ 1.11
Vim-201ENSMUST00000028062 Tmf1B9EKI3 1091 aa22.01■■□□□ 1.11
Vim-201ENSMUST00000028062 Zbtb4Q5F293 982 aa22.01■■□□□ 1.11
Vim-201ENSMUST00000028062 Atp10aO54827 1508 aa22.01■■□□□ 1.11
Vim-201ENSMUST00000028062 Depdc5P61460 1591 aa22■■□□□ 1.11
Vim-201ENSMUST00000028062 Zscan10Q3URR7 782 aa21.99■■□□□ 1.11
Vim-201ENSMUST00000028062 Prex1Q69ZK0 1650 aa21.99■■□□□ 1.11
Vim-201ENSMUST00000028062 Inpp5dQ9ES52 1191 aa21.99■■□□□ 1.11
Retrieved 100 of 22,080 RNA–protein pairs in 70.7 ms