RNA–Protein interactions for RNA: ENSMUST00000022328.13

Ldb3-202, Transcript of LIM domain-binding protein 3, mousemouse

APPRIS ALT2 TSL 1 (best) BASIC

Gene Ldb3, Length 2,468 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb3-202ENSMUST00000022328 Mast1Q9R1L5 1570 aa15.13■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Dapk1Q80YE7 1442 aa15.13■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Cwc22Q8C5N3 908 aaKnown RBP15.12■□□□□ 0.01
Ldb3-202ENSMUST00000022328 PtprgQ05909 1442 aa15.12■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Mug2P28666 1451 aa15.12■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Arhgap5P97393 1501 aa15.12■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Kiaa1210E9Q0C6 1637 aa15.12■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Cfap74Q3UY96 1578 aa15.1■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Ssh2Q5SW75 1423 aa15.1■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Gm13695A2AK44 830 aa15.1■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Trappc8E9PWG2 1437 aa15.1■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Pdcd11Q6NS46 1862 aaKnown RBP15.09■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Plekhg5Q66T02 1073 aa15.09■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Clstn2Q9ER65 966 aa15.09■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Naip6Q9JIB6 1403 aa15.09■□□□□ 0.01
Ldb3-202ENSMUST00000022328 NhsB1AV60 1647 aa15.09■□□□□ 0.01
Ldb3-202ENSMUST00000022328 Rimbp2Q80U40 1072 aa15.08■□□□□ 0
Ldb3-202ENSMUST00000022328 Rundc1Q0VDN7 615 aa15.07■□□□□ 0
Ldb3-202ENSMUST00000022328 Cpsf1Q9EPU4 1441 aaKnown RBP15.07■□□□□ 0
Ldb3-202ENSMUST00000022328 Rock1P70335 1354 aa15.07■□□□□ 0
Ldb3-202ENSMUST00000022328 Abcc1O35379 1528 aa15.07■□□□□ 0
Ldb3-202ENSMUST00000022328 Dot1lQ6XZL8 1540 aa15.07■□□□□ 0
Ldb3-202ENSMUST00000022328 Myom3A2ABU4 1439 aa15.06■□□□□ 0
Ldb3-202ENSMUST00000022328 Rrp7aQ9D1C9 280 aaKnown RBP15.06■□□□□ 0
Ldb3-202ENSMUST00000022328 Sart1Q9Z315 806 aaKnown RBP15.06■□□□□ 0
Ldb3-202ENSMUST00000022328 Asxl1P59598 1514 aa15.05■□□□□ -0
Ldb3-202ENSMUST00000022328 Abcc3B2RX12 1523 aa15.04■□□□□ -0
Ldb3-202ENSMUST00000022328 Hecw1Q8K4P8 1604 aa15.04■□□□□ -0
Ldb3-202ENSMUST00000022328 RalgapbQ8BQZ4 1484 aa15.04■□□□□ -0
Ldb3-202ENSMUST00000022328 Nolc1E9Q5C9 702 aaKnown RBP15.04■□□□□ -0
Ldb3-202ENSMUST00000022328 Card11Q8CIS0 1159 aa15.04■□□□□ -0
Ldb3-202ENSMUST00000022328 Polr3aB2RXC6 1390 aa15.03■□□□□ -0
Ldb3-202ENSMUST00000022328 Chd1P40201 1711 aa15.03■□□□□ -0
Ldb3-202ENSMUST00000022328 Cdk13Q69ZA1 1511 aaKnown RBP15.03■□□□□ -0
Ldb3-202ENSMUST00000022328 Mrs2Q5NCE8 434 aa15.02□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Abca8bQ8K440 1620 aa15.02□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Iqgap1Q9JKF1 1657 aaKnown RBP15.01□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Atp10dQ8K2X1 1416 aa15□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Cd109Q8R422 1442 aa15□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Prdm16A2A935 1275 aa15□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Slc4a2P13808 1237 aaKnown RBP15□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Rock2P70336 1388 aa14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Grwd1Q810D6 446 aaKnown RBP14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Exoc6Q8R313 802 aa14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Pelp1Q9DBD5 1123 aaKnown RBP14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Atp7aQ64430 1491 aa14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 PnisrA2AJT4 805 aaKnown RBP14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Wwc2Q6NXJ0 1187 aa14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Slc24a1Q91WD8 1130 aa14.99□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Calr4Q3TQS0 420 aa14.98□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Ppip5k1A2ARP1 1436 aa14.98□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Cdc42bpbQ7TT50 1713 aa14.98□□□□□ -0.01
Ldb3-202ENSMUST00000022328 AI481877A2ALV5 1481 aa14.97□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Washc2Q6PGL7 1334 aa14.97□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Robo2Q7TPD3 1470 aa14.96□□□□□ -0.01
Ldb3-202ENSMUST00000022328 Spag9Q58A65 1321 aaKnown RBP14.96□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Igf1rQ60751 1373 aa14.95□□□□□ -0.02
Ldb3-202ENSMUST00000022328 NrdcQ8BHG1 1161 aa14.94□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Rtn4Q99P72 1162 aaKnown RBP14.94□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Zbtb7cQ8VCZ7 619 aa14.94□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Tarbp1E9Q368 1579 aa14.94□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Supt16hQ920B9 1047 aa14.93□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Gapvd1Q6PAR5 1458 aa14.91□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Kidins220E9Q9B7 1793 aa14.91□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Znf608Q56A10 1511 aa14.9□□□□□ -0.02
Ldb3-202ENSMUST00000022328 Map3k5O35099 1380 aa14.89□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Cep170Q6A065 1588 aa14.89□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Edc4Q3UJB9 1406 aaKnown RBP14.88□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Hdac5Q9Z2V6 1113 aa14.88□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Adamts13Q769J6 1426 aa14.88□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Bach1P97302 739 aa14.88□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Ythdc2B2RR83 1445 aaKnown RBP14.87□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Abca17E9PX95 1733 aa14.87□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Setd1aE9PYH6 1716 aa14.87□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Usp54Q8BL06 1588 aaKnown RBP14.87□□□□□ -0.03
Ldb3-202ENSMUST00000022328 ShprhQ7TPQ3 1674 aa14.87□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Nsd2Q8BVE8 1365 aa14.87□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Kif1bQ60575 1816 aaKnown RBP14.85□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Kdm5cP41230 1554 aa14.84□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Zfyve16Q80U44 1528 aa14.84□□□□□ -0.03
Ldb3-202ENSMUST00000022328 Ifit1bl1D3Z6F0 470 aa14.83□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Xrn1P97789 1719 aaKnown RBP14.82□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Tubgcp6G5E8P0 1769 aa14.82□□□□□ -0.04
Ldb3-202ENSMUST00000022328 PtprtQ99M80 1454 aa14.81□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Nos1Q9Z0J4 1429 aa14.8□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Mroh3A0A1D5RM54 893 aa14.8□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Ylpm1Q9R0I7 1386 aaKnown RBP14.8□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Tulp4Q9JIL5 1547 aa14.79□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Abca9Q8K449 1623 aa14.79□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Eif5bQ05D44 1216 aaKnown RBP14.79□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Prm3Q62100 101 aa14.78□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Prdm10Q3UTQ7 1184 aa14.78□□□□□ -0.04
Ldb3-202ENSMUST00000022328 Wdr43Q6ZQL4 677 aaKnown RBP14.76□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Uggt2E9Q4X2 1504 aa14.76□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Amer1Q7TS75 1132 aa14.75□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Abcc6Q9R1S7 1498 aa14.75□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Myo5cE9Q1F5 1742 aa14.75□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Ofd1Q80Z25 1017 aa14.75□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Lemd3Q9WU40 921 aa14.75□□□□□ -0.05
Ldb3-202ENSMUST00000022328 Kif3bQ61771 747 aa14.74□□□□□ -0.05
Retrieved 100 of 22,080 RNA–protein pairs in 11.4 ms