RNA–Protein interactions for RNA: ENSMUST00000022225.11

Trim23-201, Transcript of E3 ubiquitin-protein ligase TRIM23, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Trim23, Length 3,416 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Trim23-201ENSMUST00000022225 Kif27Q7M6Z4 1394 aa16.01■□□□□ 0.15
Trim23-201ENSMUST00000022225 NexmifQ5DTT1 1515 aa16.01■□□□□ 0.15
Trim23-201ENSMUST00000022225 Hsp90ab1P11499 724 aaKnown RBP16■□□□□ 0.15
Trim23-201ENSMUST00000022225 Rgl3Q3UYI5 709 aa16■□□□□ 0.15
Trim23-201ENSMUST00000022225 RalgapbQ8BQZ4 1484 aa16■□□□□ 0.15
Trim23-201ENSMUST00000022225 Paxip1Q6NZQ4 1056 aa16■□□□□ 0.15
Trim23-201ENSMUST00000022225 Mapk8ip3Q9ESN9 1337 aa15.99■□□□□ 0.15
Trim23-201ENSMUST00000022225 Tubgcp6G5E8P0 1769 aa15.98■□□□□ 0.15
Trim23-201ENSMUST00000022225 Abcc5Q9R1X5 1436 aa15.98■□□□□ 0.15
Trim23-201ENSMUST00000022225 Gm14025A2AP89 1413 aa15.98■□□□□ 0.15
Trim23-201ENSMUST00000022225 Cdk13Q69ZA1 1511 aaKnown RBP15.98■□□□□ 0.15
Trim23-201ENSMUST00000022225 Dhx9O70133 1380 aaKnown RBP15.98■□□□□ 0.15
Trim23-201ENSMUST00000022225 Unc13aQ4KUS2 1712 aa15.97■□□□□ 0.15
Trim23-201ENSMUST00000022225 SphkapQ6NSW3 1687 aa15.96■□□□□ 0.15
Trim23-201ENSMUST00000022225 Trim30dE9PWL0 497 aa15.96■□□□□ 0.15
Trim23-201ENSMUST00000022225 Rwdd1Q9CQK7 243 aa15.96■□□□□ 0.15
Trim23-201ENSMUST00000022225 LrpprcQ6PB66 1392 aaKnown RBP15.96■□□□□ 0.15
Trim23-201ENSMUST00000022225 Antxr1Q9CZ52 562 aa15.96■□□□□ 0.14
Trim23-201ENSMUST00000022225 Ccdc183A2AJB1 534 aa15.95■□□□□ 0.14
Trim23-201ENSMUST00000022225 Kif16bB1AVY7 1312 aa15.95■□□□□ 0.14
Trim23-201ENSMUST00000022225 Gapvd1Q6PAR5 1458 aa15.94■□□□□ 0.14
Trim23-201ENSMUST00000022225 Armcx1Q9CX83 456 aa15.94■□□□□ 0.14
Trim23-201ENSMUST00000022225 BC005561E9Q5E2 1589 aa15.94■□□□□ 0.14
Trim23-201ENSMUST00000022225 Gm6268A2A3U9 297 aa15.94■□□□□ 0.14
Trim23-201ENSMUST00000022225 Clasp1Q80TV8 1535 aaKnown RBP15.94■□□□□ 0.14
Trim23-201ENSMUST00000022225 Soga1E1U8D0 1418 aa15.94■□□□□ 0.14
Trim23-201ENSMUST00000022225 AlkP97793 1621 aa15.93■□□□□ 0.14
Trim23-201ENSMUST00000022225 Dcaf11Q91VU6 549 aa15.93■□□□□ 0.14
Trim23-201ENSMUST00000022225 Plekhh2Q8C115 1491 aa15.93■□□□□ 0.14
Trim23-201ENSMUST00000022225 Spryd3E9Q9B3 442 aa15.93■□□□□ 0.14
Trim23-201ENSMUST00000022225 Tex2Q6ZPJ0 1128 aaKnown RBP15.92■□□□□ 0.14
Trim23-201ENSMUST00000022225 Plekhh1Q80TI1 1356 aa15.92■□□□□ 0.14
Trim23-201ENSMUST00000022225 Gpatch8A2A6A1 1505 aa15.91■□□□□ 0.14
Trim23-201ENSMUST00000022225 Pds5bQ4VA53 1446 aaKnown RBP15.91■□□□□ 0.14
Trim23-201ENSMUST00000022225 Rrp12Q6P5B0 1295 aaKnown RBP15.9■□□□□ 0.14
Trim23-201ENSMUST00000022225 Cpsf1Q9EPU4 1441 aaKnown RBP15.9■□□□□ 0.14
Trim23-201ENSMUST00000022225 PogkQ80TC5 607 aa15.9■□□□□ 0.14
Trim23-201ENSMUST00000022225 Arid4bA2CG63 1314 aaKnown RBP15.9■□□□□ 0.14
Trim23-201ENSMUST00000022225 4930567H17RikQ3V0K5 233 aa15.9■□□□□ 0.14
Trim23-201ENSMUST00000022225 Plch2A2AP18 1501 aa15.89■□□□□ 0.14
Trim23-201ENSMUST00000022225 Rock1P70335 1354 aa15.89■□□□□ 0.13
Trim23-201ENSMUST00000022225 Sptbn5F6UCX4 1208 aa15.89■□□□□ 0.13
Trim23-201ENSMUST00000022225 Il4rP16382 810 aa15.89■□□□□ 0.13
Trim23-201ENSMUST00000022225 Samd9lQ69Z37 1561 aa15.88■□□□□ 0.13
Trim23-201ENSMUST00000022225 Tex14Q7M6U3 1450 aa15.88■□□□□ 0.13
Trim23-201ENSMUST00000022225 DroshaQ5HZJ0 1373 aaKnown RBP15.88■□□□□ 0.13
Trim23-201ENSMUST00000022225 Kdm3bQ6ZPY7 1562 aa15.88■□□□□ 0.13
Trim23-201ENSMUST00000022225 Wdr7Q920I9 1489 aa15.88■□□□□ 0.13
Trim23-201ENSMUST00000022225 Kdm5cP41230 1554 aa15.88■□□□□ 0.13
Trim23-201ENSMUST00000022225 Dusp27Q148W8 1138 aa15.87■□□□□ 0.13
Trim23-201ENSMUST00000022225 Duox2A2AQ99 1517 aa15.87■□□□□ 0.13
Trim23-201ENSMUST00000022225 Esx1O88933 382 aa15.87■□□□□ 0.13
Trim23-201ENSMUST00000022225 Mcm4P49717 862 aa15.87■□□□□ 0.13
Trim23-201ENSMUST00000022225 Supt6hQ62383 1726 aaKnown RBP15.86■□□□□ 0.13
Trim23-201ENSMUST00000022225 CrbnQ8C7D2 445 aa15.86■□□□□ 0.13
Trim23-201ENSMUST00000022225 Grwd1Q810D6 446 aaKnown RBP15.85■□□□□ 0.13
Trim23-201ENSMUST00000022225 Setd1aE9PYH6 1716 aa15.85■□□□□ 0.13
Trim23-201ENSMUST00000022225 PogzQ8BZH4 1409 aaKnown RBP15.85■□□□□ 0.13
Trim23-201ENSMUST00000022225 Arhgef40Q3UPH7 1517 aa15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 Chrna2Q91X60 512 aa15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 Kdm6bQ5NCY0 1641 aa15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 Il16O54824 1322 aa15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 Nom1Q3UFM5 854 aaKnown RBP15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 Clcn1Q64347 994 aa15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 Asxl1P59598 1514 aa15.84■□□□□ 0.13
Trim23-201ENSMUST00000022225 ArxO35085 564 aa15.83■□□□□ 0.13
Trim23-201ENSMUST00000022225 Apbb1Q9QXJ1 710 aa15.83■□□□□ 0.13
Trim23-201ENSMUST00000022225 Polr3aB2RXC6 1390 aa15.83■□□□□ 0.12
Trim23-201ENSMUST00000022225 Ttll5Q8CHB8 1328 aa15.83■□□□□ 0.12
Trim23-201ENSMUST00000022225 Adgrb2Q8CGM1 1561 aa15.83■□□□□ 0.12
Trim23-201ENSMUST00000022225 Iqgap1Q9JKF1 1657 aaKnown RBP15.82■□□□□ 0.12
Trim23-201ENSMUST00000022225 Tpm2P58774 284 aa15.82■□□□□ 0.12
Trim23-201ENSMUST00000022225 Tnpo1Q8BFY9 898 aaKnown RBP15.82■□□□□ 0.12
Trim23-201ENSMUST00000022225 Tarbp1E9Q368 1579 aa15.81■□□□□ 0.12
Trim23-201ENSMUST00000022225 Tspyl2Q7TQI8 677 aa15.8■□□□□ 0.12
Trim23-201ENSMUST00000022225 Zfp91Q62511 572 aa15.79■□□□□ 0.12
Trim23-201ENSMUST00000022225 Irf5P56477 497 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 Trak1Q6PD31 939 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 BccipQ9CWI3 316 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 Rabep1O35551 862 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 Ssh1Q76I79 1042 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 PrxO55103 1391 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 Pank3Q8R2W9 370 aa15.78■□□□□ 0.12
Trim23-201ENSMUST00000022225 Cux2P70298 1426 aa15.77■□□□□ 0.12
Trim23-201ENSMUST00000022225 Gtf3c5Q8R2T8 520 aa15.77■□□□□ 0.12
Trim23-201ENSMUST00000022225 CadpsQ80TJ1 1355 aa15.77■□□□□ 0.12
Trim23-201ENSMUST00000022225 Tbc1d32Q3URV1 1296 aa15.76■□□□□ 0.11
Trim23-201ENSMUST00000022225 Znf521Q6KAS7 1311 aa15.75■□□□□ 0.11
Trim23-201ENSMUST00000022225 Isy1Q69ZQ2 285 aaKnown RBP15.75■□□□□ 0.11
Trim23-201ENSMUST00000022225 Ddrgk1Q80WW9 315 aa15.75■□□□□ 0.11
Trim23-201ENSMUST00000022225 Trpm2Q91YD4 1506 aa15.75■□□□□ 0.11
Trim23-201ENSMUST00000022225 Inpp5dQ9ES52 1191 aa15.75■□□□□ 0.11
Trim23-201ENSMUST00000022225 Rad54l2Q99NG0 1466 aa15.75■□□□□ 0.11
Trim23-201ENSMUST00000022225 Scaf1Q5U4C3 1256 aaKnown RBP15.74■□□□□ 0.11
Trim23-201ENSMUST00000022225 Cul9Q80TT8 1865 aa15.74■□□□□ 0.11
Trim23-201ENSMUST00000022225 Rrbp1Q99PL5 1605 aaKnown RBP15.74■□□□□ 0.11
Trim23-201ENSMUST00000022225 Catsper2A2ARP9 588 aa15.73■□□□□ 0.11
Trim23-201ENSMUST00000022225 Ppp2r3aB2RXC8 1150 aa15.73■□□□□ 0.11
Trim23-201ENSMUST00000022225 Zscan10Q3URR7 782 aa15.73■□□□□ 0.11
Trim23-201ENSMUST00000022225 Rlbp1Q9Z275 317 aa15.73■□□□□ 0.11
Retrieved 100 of 22,080 RNA–protein pairs in 31.8 ms