RNA–Protein interactions for RNA: YPL104W

MSD1, Transcript of Mitochondrial aspartyl-tRNA synthetase, yeastyeast

Gene MSD1, Length 1,977 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
MSD1YPL104W STE24P47154 453 aa3.36□□□□□ -1.87
MSD1YPL104W BUD9P53226 547 aa3.36□□□□□ -1.87
MSD1YPL104W SRL4Q03085 281 aa3.36□□□□□ -1.87
MSD1YPL104W RSM24Q03976 319 aa3.36□□□□□ -1.87
MSD1YPL104W KRE28Q04431 385 aa3.36□□□□□ -1.87
MSD1YPL104W MCM21Q06675 368 aa3.36□□□□□ -1.87
MSD1YPL104W MMT2Q08970 484 aa3.36□□□□□ -1.87
MSD1YPL104W LEU9Q12166 604 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W NFI1Q12216 726 aa3.36□□□□□ -1.87
MSD1YPL104W YDR262WQ12331 272 aa3.36□□□□□ -1.87
MSD1YPL104W PST2Q12335 198 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W TRM10Q12400 293 aa3.36□□□□□ -1.87
MSD1YPL104W SKS1Q12505 502 aa3.36□□□□□ -1.87
MSD1YPL104W MET17P06106 444 aa3.36□□□□□ -1.87
MSD1YPL104W RPB5P20434 215 aa3.36□□□□□ -1.87
MSD1YPL104W BUD5P25300 642 aaPredicted RBP3.36□□□□□ -1.87
MSD1YPL104W RNQ1P25367 405 aa3.36□□□□□ -1.87
MSD1YPL104W RRP7P25368 297 aaPredicted RBP3.36□□□□□ -1.87
MSD1YPL104W ASF2P32448 525 aaPredicted RBP3.36□□□□□ -1.87
MSD1YPL104W OAR1P35731 278 aa3.36□□□□□ -1.87
MSD1YPL104W MRPL36P36531 177 aa3.36□□□□□ -1.87
MSD1YPL104W CTF8P38877 133 aa3.36□□□□□ -1.87
MSD1YPL104W PEX7P39108 375 aa3.36□□□□□ -1.87
MSD1YPL104W RRG9P40156 214 aa3.36□□□□□ -1.87
MSD1YPL104W SDP1P40479 209 aa3.36□□□□□ -1.87
MSD1YPL104W MET28P40573 187 aa3.36□□□□□ -1.87
MSD1YPL104W RPL10P41805 221 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W CIS3P47001 227 aa3.36□□□□□ -1.87
MSD1YPL104W TAF4P50105 388 aa3.36□□□□□ -1.87
MSD1YPL104W HOS2P53096 452 aaPredicted RBP3.36□□□□□ -1.87
MSD1YPL104W ART5P53244 586 aaKnown RBP3.36□□□□□ -1.87
MSD1YPL104W TWF1P53250 332 aa3.36□□□□□ -1.87
MSD1YPL104W YGR168CP53293 376 aa3.36□□□□□ -1.87
MSD1YPL104W YNR014WP53719 212 aa3.36□□□□□ -1.87
MSD1YPL104W ARP10Q04549 284 aa3.36□□□□□ -1.87
MSD1YPL104W RRN11Q04712 507 aa3.36□□□□□ -1.87
MSD1YPL104W IRC13Q08630 104 aa3.36□□□□□ -1.87
MSD1YPL104W VTS1Q08831 523 aaKnown RBP RIP-Chip data3.36□□□□□ -1.87not detected
MSD1YPL104W FDH1Q08911 376 aa3.36□□□□□ -1.87
MSD1YPL104W BSC1Q12140 328 aa3.36□□□□□ -1.87
MSD1YPL104W YGK3Q12222 375 aaPredicted RBP3.36□□□□□ -1.87
MSD1YPL104W REP1P03871 373 aa3.35□□□□□ -1.87
MSD1YPL104W URA3P03962 267 aa3.35□□□□□ -1.87
MSD1YPL104W SIR3P06701 978 aa3.35□□□□□ -1.87
MSD1YPL104W RPC40P07703 335 aaKnown RBP3.35□□□□□ -1.87
MSD1YPL104W TFS1P14306 219 aa3.35□□□□□ -1.87
MSD1YPL104W FRS1P15624 595 aaKnown RBP3.35□□□□□ -1.87
MSD1YPL104W IDP1P21954 428 aaKnown RBP3.35□□□□□ -1.87
MSD1YPL104W CLB2P24869 491 aa3.35□□□□□ -1.87
MSD1YPL104W ITR2P30606 609 aa3.35□□□□□ -1.87
MSD1YPL104W UTP11P34247 250 aaPredicted RBP3.35□□□□□ -1.87
MSD1YPL104W YPK3P38070 525 aa3.35□□□□□ -1.87
MSD1YPL104W MNL1P38888 796 aa3.35□□□□□ -1.87
MSD1YPL104W IPT1P38954 527 aa3.35□□□□□ -1.87
MSD1YPL104W YNL195CP40168 261 aa3.35□□□□□ -1.87
MSD1YPL104W SOK1P40317 901 aa3.35□□□□□ -1.87
MSD1YPL104W SNM1P40993 198 aa3.35□□□□□ -1.87
MSD1YPL104W BUD8P41698 603 aa3.35□□□□□ -1.87
MSD1YPL104W SWP82P43554 623 aa3.35□□□□□ -1.87
MSD1YPL104W RPS12P48589 143 aaKnown RBP3.35□□□□□ -1.87
MSD1YPL104W CDH1P53197 566 aa3.35□□□□□ -1.87
MSD1YPL104W NQM1P53228 333 aaPredicted RBP3.35□□□□□ -1.87
MSD1YPL104W ASI1P54074 624 aa3.35□□□□□ -1.87
MSD1YPL104W TPS1Q00764 495 aaKnown RBP3.35□□□□□ -1.87
MSD1YPL104W YMD8Q03697 442 aa3.35□□□□□ -1.87
MSD1YPL104W YML053CQ04978 212 aa3.35□□□□□ -1.87
MSD1YPL104W YLR345WQ06137 509 aa3.35□□□□□ -1.87
MSD1YPL104W NEJ1Q06148 342 aa3.35□□□□□ -1.87
MSD1YPL104W FMP45Q07651 309 aa3.35□□□□□ -1.87
MSD1YPL104W MSH5Q12175 901 aa3.35□□□□□ -1.87
MSD1YPL104W SCM3Q12334 223 aa3.35□□□□□ -1.87
MSD1YPL104W YOR019WQ99248 730 aa3.35□□□□□ -1.87
MSD1YPL104W THR1P17423 357 aaKnown RBP3.34□□□□□ -1.87
MSD1YPL104W PRP2P20095 876 aaPredicted RBP3.34□□□□□ -1.87
MSD1YPL104W NRP1P32770 719 aaKnown RBP RIP-Chip data3.34□□□□□ -1.87not detected
MSD1YPL104W NPL6P32832 435 aa3.34□□□□□ -1.87
MSD1YPL104W PRP39P39682 629 aaKnown RBP3.34□□□□□ -1.87
MSD1YPL104W AST2P39945 430 aaKnown RBP3.34□□□□□ -1.87
MSD1YPL104W EFM3P47163 339 aa3.34□□□□□ -1.87
MSD1YPL104W AAD10P47182 288 aa3.34□□□□□ -1.87
MSD1YPL104W NUP57P48837 541 aa3.34□□□□□ -1.87
MSD1YPL104W YGR054WP53235 642 aaKnown RBP3.34□□□□□ -1.87
MSD1YPL104W COX18P53239 316 aa3.34□□□□□ -1.87
MSD1YPL104W SYF2P53277 215 aaPredicted RBP3.34□□□□□ -1.87
MSD1YPL104W MTQ1P53944 314 aa3.34□□□□□ -1.87
MSD1YPL104W YSA1Q01976 231 aa3.34□□□□□ -1.87
MSD1YPL104W GRX5Q02784 150 aa3.34□□□□□ -1.87
MSD1YPL104W ABZ2Q03266 374 aa3.34□□□□□ -1.87
MSD1YPL104W RNH1Q04740 348 aa3.34□□□□□ -1.87
MSD1YPL104W TRI1Q05024 226 aa3.34□□□□□ -1.87
MSD1YPL104W RSF1Q05043 376 aa3.34□□□□□ -1.87
MSD1YPL104W RNH202Q05635 350 aa3.34□□□□□ -1.87
MSD1YPL104W VPS36Q06696 566 aa3.34□□□□□ -1.87
MSD1YPL104W MDM36Q06820 579 aa3.34□□□□□ -1.87
MSD1YPL104W GSH2Q08220 491 aa3.34□□□□□ -1.87
MSD1YPL104W CBS1P14066 229 aa3.34□□□□□ -1.88
MSD1YPL104W CWH43P25618 953 aa3.34□□□□□ -1.88
MSD1YPL104W YMC1P32331 307 aa3.34□□□□□ -1.88
MSD1YPL104W MSN2P33748 704 aa3.34□□□□□ -1.88
MSD1YPL104W IRC6P43615 237 aa3.34□□□□□ -1.88
Retrieved 100 of 5,963 RNA–protein pairs in 16.2 ms