RNA–Protein interactions for RNA: YNL021W

HDA1, Transcript of Putative catalytic subunit of a class II histone deacetylase complex, yeastyeast

Gene HDA1, Length 2,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
HDA1YNL021W FAU1P40099 211 aa6.46□□□□□ -1.38
HDA1YNL021W YER189WP40104 122 aa6.46□□□□□ -1.38
HDA1YNL021W SLM1P40485 686 aa6.46□□□□□ -1.38
HDA1YNL021W UTP25P40498 721 aaKnown RBP6.46□□□□□ -1.38
HDA1YNL021W YFL064CP43540 174 aa6.46□□□□□ -1.38
HDA1YNL021W RPC17P47076 161 aa6.46□□□□□ -1.38
HDA1YNL021W RHO4Q00246 291 aa6.46□□□□□ -1.38
HDA1YNL021W SMP3Q04174 516 aa6.46□□□□□ -1.38
HDA1YNL021W YDR222WQ04925 415 aa6.46□□□□□ -1.38
HDA1YNL021W YLR283WQ05867 314 aa6.46□□□□□ -1.38
HDA1YNL021W RAX1Q08760 435 aa6.46□□□□□ -1.38
HDA1YNL021W RIO1Q12196 484 aaKnown RBP6.46□□□□□ -1.38
HDA1YNL021W AI5_BETAQ9ZZX0 354 aa6.46□□□□□ -1.38
HDA1YNL021W ADH2P00331 348 aaKnown RBP6.45□□□□□ -1.38
HDA1YNL021W SNA3P14359 133 aa6.45□□□□□ -1.38
HDA1YNL021W CYM1P32898 989 aa6.45□□□□□ -1.38
HDA1YNL021W YRB2P40517 327 aa6.45□□□□□ -1.38
HDA1YNL021W HAM1P47119 197 aaKnown RBP6.45□□□□□ -1.38
HDA1YNL021W ASP3-2P0CX77 362 aa6.44□□□□□ -1.38
HDA1YNL021W ASP3-3P0CX78 362 aa6.44□□□□□ -1.38
HDA1YNL021W ASP3-4P0CX79 362 aa6.44□□□□□ -1.38
HDA1YNL021W ASP3-1P0CZ17 362 aa6.44□□□□□ -1.38
HDA1YNL021W UBC6P33296 250 aaPredicted RBP6.44□□□□□ -1.38
HDA1YNL021W TOD6P34219 525 aa6.44□□□□□ -1.38
HDA1YNL021W SPT10P35208 640 aa6.44□□□□□ -1.38
HDA1YNL021W YPK3P38070 525 aa6.44□□□□□ -1.38
HDA1YNL021W HIS2P38635 335 aa6.44□□□□□ -1.38
HDA1YNL021W MIC19P43594 170 aa6.44□□□□□ -1.38
HDA1YNL021W MRP51Q02950 344 aa6.44□□□□□ -1.38
HDA1YNL021W NNT1Q05874 261 aa6.44□□□□□ -1.38
HDA1YNL021W ABP140Q08641 628 aaKnown RBP6.44□□□□□ -1.38
HDA1YNL021W ATG34Q12292 412 aa6.44□□□□□ -1.38
HDA1YNL021W UTR1P21373 530 aa6.44□□□□□ -1.38
HDA1YNL021W HRR25P29295 494 aaKnown RBP6.44□□□□□ -1.38
HDA1YNL021W ZIP1P31111 875 aa6.44□□□□□ -1.38
HDA1YNL021W YGR067CP53243 804 aa6.44□□□□□ -1.38
HDA1YNL021W RPM2Q02773 1202 aa6.44□□□□□ -1.38
HDA1YNL021W IZH1Q03419 316 aa6.44□□□□□ -1.38
HDA1YNL021W RRP17Q04031 235 aaPredicted RBP6.44□□□□□ -1.38
HDA1YNL021W BUR2Q05949 395 aa6.44□□□□□ -1.38
HDA1YNL021W ASA1Q06822 443 aa6.44□□□□□ -1.38
HDA1YNL021W MOT1P32333 1867 aa6.43□□□□□ -1.38
HDA1YNL021W RRT12P25381 491 aa6.43□□□□□ -1.38
HDA1YNL021W SKN1P33336 771 aa6.43□□□□□ -1.38
HDA1YNL021W BIO4P53630 237 aa6.43□□□□□ -1.38
HDA1YNL021W HXT11P54862 567 aa6.43□□□□□ -1.38
HDA1YNL021W LDS2Q08218 356 aa6.43□□□□□ -1.38
HDA1YNL021W YOL073CQ08232 322 aa6.43□□□□□ -1.38
HDA1YNL021W MCH4Q08268 501 aa6.43□□□□□ -1.38
HDA1YNL021W BTS1Q12051 335 aa6.43□□□□□ -1.38
HDA1YNL021W GLT1Q12680 2145 aaKnown RBP6.43□□□□□ -1.38
HDA1YNL021W RAD3P06839 778 aa6.43□□□□□ -1.38
HDA1YNL021W AQY1P0CD91 305 aa6.43□□□□□ -1.38
HDA1YNL021W CSM1P25651 190 aa6.43□□□□□ -1.38
HDA1YNL021W MMS21P38632 267 aa6.43□□□□□ -1.38
HDA1YNL021W PHO90P39535 881 aa6.43□□□□□ -1.38
HDA1YNL021W BTT1P40314 149 aaPredicted RBP6.43□□□□□ -1.38
HDA1YNL021W RRN9P53437 365 aa6.43□□□□□ -1.38
HDA1YNL021W GIS1Q03833 894 aa6.43□□□□□ -1.38
HDA1YNL021W TMN2Q04562 672 aa6.43□□□□□ -1.38
HDA1YNL021W MRPS5P33759 307 aa6.42□□□□□ -1.38
HDA1YNL021W LEU5P38702 357 aa6.42□□□□□ -1.38
HDA1YNL021W LYS12P40495 371 aaKnown RBP6.42□□□□□ -1.38
HDA1YNL021W NAT4Q04751 285 aa6.42□□□□□ -1.38
HDA1YNL021W YOS9Q99220 542 aa6.42□□□□□ -1.38
HDA1YNL021W RAD1P06777 1100 aa6.41□□□□□ -1.38
HDA1YNL021W BUB3P26449 341 aa6.41□□□□□ -1.38
HDA1YNL021W PRR1P28708 518 aa6.41□□□□□ -1.38
HDA1YNL021W APE2P32454 952 aaKnown RBP6.41□□□□□ -1.38
HDA1YNL021W VAM7P32912 316 aa6.41□□□□□ -1.38
HDA1YNL021W AIM29P36154 155 aa6.41□□□□□ -1.38
HDA1YNL021W LAG1P38703 411 aa6.41□□□□□ -1.38
HDA1YNL021W NOP13P53883 403 aaKnown RBP RIP-Chip data6.41□□□□□ -1.38not detected
HDA1YNL021W RPL22BP56628 122 aaKnown RBP6.41□□□□□ -1.38
HDA1YNL021W SLT2Q00772 484 aa6.41□□□□□ -1.38
HDA1YNL021W MUK1Q02866 612 aa6.41□□□□□ -1.38
HDA1YNL021W LAA1P39526 2014 aa6.41□□□□□ -1.38
HDA1YNL021W BI2P03873 423 aa6.41□□□□□ -1.38
HDA1YNL021W RPL4AP10664 362 aaKnown RBP6.41□□□□□ -1.38
HDA1YNL021W PRP16P15938 1071 aaPredicted RBP6.41□□□□□ -1.38
HDA1YNL021W GLN3P18494 730 aa6.41□□□□□ -1.38
HDA1YNL021W YPK2P18961 677 aa6.41□□□□□ -1.38
HDA1YNL021W FAR1P21268 830 aa6.41□□□□□ -1.38
HDA1YNL021W REC114P32841 428 aa6.41□□□□□ -1.38
HDA1YNL021W SMF2P38778 549 aa6.41□□□□□ -1.38
HDA1YNL021W BIG1P38813 335 aa6.41□□□□□ -1.38
HDA1YNL021W YHR182WP38870 785 aa6.41□□□□□ -1.38
HDA1YNL021W CTK3P46963 296 aaPredicted RBP6.41□□□□□ -1.38
HDA1YNL021W RPL4BP49626 362 aaKnown RBP6.41□□□□□ -1.38
HDA1YNL021W NAS6P50086 228 aa6.41□□□□□ -1.38
HDA1YNL021W NUP100Q02629 959 aa6.41□□□□□ -1.38
HDA1YNL021W LGE1Q02796 332 aaKnown RBP6.41□□□□□ -1.38
HDA1YNL021W DIC1Q06143 298 aa6.41□□□□□ -1.38
HDA1YNL021W ORT1Q12375 292 aa6.41□□□□□ -1.38
HDA1YNL021W LAG2Q92325 660 aa6.41□□□□□ -1.38
HDA1YNL021W BI3Q9ZZW7 517 aa6.41□□□□□ -1.38
HDA1YNL021W RIF1P29539 1916 aa6.4□□□□□ -1.38
HDA1YNL021W COX4P04037 155 aa6.4□□□□□ -1.38
HDA1YNL021W ATG7P38862 630 aa6.4□□□□□ -1.38
HDA1YNL021W SIM1P40472 476 aa6.4□□□□□ -1.38
Retrieved 100 of 5,963 RNA–protein pairs in 130 ms