RNA–Protein interactions for RNA: YLR399C

BDF1, Transcript of Protein involved in transcription initiation, yeastyeast

Gene BDF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
BDF1YLR399C SNO1Q03144 224 aa11.54□□□□□ -0.56
BDF1YLR399C ELP6Q04868 273 aa11.54□□□□□ -0.56
BDF1YLR399C DFG16Q99234 619 aa11.54□□□□□ -0.56
BDF1YLR399C CTS1P29029 562 aa11.53□□□□□ -0.56
BDF1YLR399C YPT52P36018 234 aaKnown RBP11.53□□□□□ -0.56
BDF1YLR399C YKL162CP36052 402 aa11.53□□□□□ -0.56
BDF1YLR399C MTC4P38335 694 aaKnown RBP11.53□□□□□ -0.56
BDF1YLR399C DED81P38707 554 aaKnown RBP11.53□□□□□ -0.56
BDF1YLR399C UBA4P38820 440 aa11.53□□□□□ -0.56
BDF1YLR399C GNA1P43577 159 aaPredicted RBP11.53□□□□□ -0.56
BDF1YLR399C MRX5P47007 382 aa11.53□□□□□ -0.56
BDF1YLR399C SAY1P53324 424 aa11.53□□□□□ -0.56
BDF1YLR399C YNL143CP53908 130 aa11.53□□□□□ -0.56
BDF1YLR399C RRN11Q04712 507 aa11.53□□□□□ -0.56
BDF1YLR399C RNH202Q05635 350 aa11.53□□□□□ -0.56
BDF1YLR399C YPR084WQ06821 456 aa11.53□□□□□ -0.56
BDF1YLR399C YPL066WQ12194 479 aa11.53□□□□□ -0.56
BDF1YLR399C ZWF1P11412 505 aaKnown RBP11.53□□□□□ -0.56
BDF1YLR399C DBF20P32328 564 aa11.53□□□□□ -0.56
BDF1YLR399C LOH1P47055 219 aa11.53□□□□□ -0.56
BDF1YLR399C YJR111CP47148 283 aaKnown RBP11.53□□□□□ -0.56
BDF1YLR399C RTS3P53289 263 aa11.53□□□□□ -0.56
BDF1YLR399C RPN4Q03465 531 aa11.53□□□□□ -0.56
BDF1YLR399C MDM30Q05930 598 aa11.53□□□□□ -0.56
BDF1YLR399C HBN1Q96VH4 193 aa11.53□□□□□ -0.56
BDF1YLR399C SRN2Q99176 213 aa11.53□□□□□ -0.56
BDF1YLR399C YPR096CO13587 100 aa11.52□□□□□ -0.57
BDF1YLR399C COX3P00420 269 aa11.52□□□□□ -0.57
BDF1YLR399C CAR2P07991 424 aaKnown RBP11.52□□□□□ -0.57
BDF1YLR399C FUR1P18562 216 aaKnown RBP11.52□□□□□ -0.57
BDF1YLR399C SNF6P18888 332 aa11.52□□□□□ -0.57
BDF1YLR399C FUN26P31381 517 aa11.52□□□□□ -0.57
BDF1YLR399C NAB2P32505 525 aaKnown RBP RIP-Chip data11.52□□□□□ -0.57not detected
BDF1YLR399C PMT1P33775 817 aa11.52□□□□□ -0.57
BDF1YLR399C BMT5P40493 336 aa11.52□□□□□ -0.57
BDF1YLR399C IBA57P47158 497 aa11.52□□□□□ -0.57
BDF1YLR399C EXG2P52911 562 aa11.52□□□□□ -0.57
BDF1YLR399C MRPL22P53881 309 aa11.52□□□□□ -0.57
BDF1YLR399C YCL001W-AP87012 153 aa11.52□□□□□ -0.57
BDF1YLR399C ECM22Q05958 814 aaPredicted RBP11.52□□□□□ -0.57
BDF1YLR399C IPK1Q06667 281 aa11.52□□□□□ -0.57
BDF1YLR399C SSK1Q07084 712 aa11.52□□□□□ -0.57
BDF1YLR399C DCN1Q12395 269 aa11.52□□□□□ -0.57
BDF1YLR399C AI3P03877 415 aa11.51□□□□□ -0.57
BDF1YLR399C ERD1P16151 362 aa11.51□□□□□ -0.57
BDF1YLR399C EXG1P23776 448 aaKnown RBP11.51□□□□□ -0.57
BDF1YLR399C VMA5P31412 392 aaKnown RBP11.51□□□□□ -0.57
BDF1YLR399C UIP5P36137 443 aa11.51□□□□□ -0.57
BDF1YLR399C ZTA1P38230 334 aaKnown RBP11.51□□□□□ -0.57
BDF1YLR399C HSE1P38753 452 aa11.51□□□□□ -0.57
BDF1YLR399C YIR016WP40572 265 aa11.51□□□□□ -0.57
BDF1YLR399C MRPS18P42847 217 aa11.51□□□□□ -0.57
BDF1YLR399C YNL260CP53846 198 aa11.51□□□□□ -0.57
BDF1YLR399C RCR2Q03446 210 aaKnown RBP11.51□□□□□ -0.57
BDF1YLR399C YPR063CQ12160 140 aa11.51□□□□□ -0.57
BDF1YLR399C INP53Q12271 1107 aa11.51□□□□□ -0.57
BDF1YLR399C MTC2P34246 357 aa11.51□□□□□ -0.57
BDF1YLR399C ERV15P38312 142 aa11.51□□□□□ -0.57
BDF1YLR399C PTH1P38876 190 aaKnown RBP11.51□□□□□ -0.57
BDF1YLR399C GCV3P39726 170 aaPredicted RBP11.51□□□□□ -0.57
BDF1YLR399C MEP1P40260 492 aa11.51□□□□□ -0.57
BDF1YLR399C OAZ1Q02803 292 aa11.51□□□□□ -0.57
BDF1YLR399C YMR252CQ04814 134 aa11.51□□□□□ -0.57
BDF1YLR399C CRT10Q08226 957 aa11.51□□□□□ -0.57
BDF1YLR399C GUP2Q08929 609 aa11.51□□□□□ -0.57
BDF1YLR399C FMP40Q08968 688 aaPredicted RBP11.51□□□□□ -0.57
BDF1YLR399C YPR011CQ12251 326 aa11.51□□□□□ -0.57
BDF1YLR399C PDA1P16387 420 aaKnown RBP11.5□□□□□ -0.57
BDF1YLR399C HOP1P20050 605 aa11.5□□□□□ -0.57
BDF1YLR399C MRP17P28778 131 aa11.5□□□□□ -0.57
BDF1YLR399C MET22P32179 357 aa11.5□□□□□ -0.57
BDF1YLR399C CSE2P33308 149 aa11.5□□□□□ -0.57
BDF1YLR399C TIP20P33891 701 aa11.5□□□□□ -0.57
BDF1YLR399C MTH1P35198 433 aa11.5□□□□□ -0.57
BDF1YLR399C PAU24P38155 120 aa11.5□□□□□ -0.57
BDF1YLR399C PRM10P42946 383 aa11.5□□□□□ -0.57
BDF1YLR399C MNN10P50108 393 aaKnown RBP11.5□□□□□ -0.57
BDF1YLR399C DOC1P53068 250 aa11.5□□□□□ -0.57
BDF1YLR399C ASI3P53983 676 aa11.5□□□□□ -0.57
BDF1YLR399C OST6Q03723 332 aa11.5□□□□□ -0.57
BDF1YLR399C PCL9Q12477 304 aa11.5□□□□□ -0.57
BDF1YLR399C HIS5P07172 385 aa11.5□□□□□ -0.57
BDF1YLR399C IFM1P25038 676 aa11.5□□□□□ -0.57
BDF1YLR399C NTH1P32356 751 aa11.5□□□□□ -0.57
BDF1YLR399C MRPL37P36532 105 aa11.5□□□□□ -0.57
BDF1YLR399C YBR284WP38150 797 aa11.5□□□□□ -0.57
BDF1YLR399C LRP1P38801 184 aaKnown RBP11.5□□□□□ -0.57
BDF1YLR399C VAC8P39968 578 aa11.5□□□□□ -0.57
BDF1YLR399C YHC3P47040 408 aa11.5□□□□□ -0.57
BDF1YLR399C MRX6P48564 524 aa11.5□□□□□ -0.57
BDF1YLR399C MNT4P53745 580 aa11.5□□□□□ -0.57
BDF1YLR399C YNL134CP53912 376 aaKnown RBP11.5□□□□□ -0.57
BDF1YLR399C LRS4Q04087 347 aaKnown RBP11.5□□□□□ -0.57
BDF1YLR399C SPR28Q04921 423 aa11.5□□□□□ -0.57
BDF1YLR399C MHR1Q06630 226 aa11.5□□□□□ -0.57
BDF1YLR399C YIL002W-AQ3E7Z5 69 aa11.5□□□□□ -0.57
BDF1YLR399C SCH9P11792 824 aaKnown RBP11.49□□□□□ -0.57
BDF1YLR399C YCL002CP25565 263 aa11.49□□□□□ -0.57
BDF1YLR399C PXA2P34230 853 aa11.49□□□□□ -0.57
BDF1YLR399C YHR177WP38867 453 aa11.49□□□□□ -0.57
Retrieved 100 of 5,963 RNA–protein pairs in 70.3 ms