RNA–Protein interactions for RNA: YLR353W

BUD8, Transcript of Protein involved in bud-site selection, yeast

Gene BUD8, Length 1,812 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
BUD8	YLR353W	AST1	P35183	429 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	ECM15	P35195	104 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	KDX1	P36005	433 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	TRM5	P38793	499 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	TDA11	P38854	504 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	POP2	P39008	433 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	SWS2	P53937	143 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	VHS1	Q03785	461 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	NDL1	Q06568	189 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	YPR202W	Q08993	238 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	RGS2	Q99188	309 aa		4.25	□□□□□ -1.73
BUD8	YLR353W	CHS1	P08004	1131 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	YAK1	P14680	807 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	DAP2	P18962	818 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	BUB3	P26449	341 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	ACH1	P32316	526 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	DPH5	P32469	300 aa	Predicted RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	SMI1	P32566	505 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	SPR1	P32603	445 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	SOR1	P35497	357 aa	Known RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	RRN10	P38204	145 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	AIM18	P38884	321 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	ATF1	P40353	525 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	XBP1	P40489	647 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	ERG10	P41338	398 aa	Known RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	GUF1	P46943	645 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	VMA10	P48836	114 aa	Known RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	DSL1	P53847	754 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	NOP13	P53883	403 aa	Known RBP RIP-Chip data	4.24	□□□□□ -1.73	not detected
BUD8	YLR353W	RPM2	Q02773	1202 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	ELP3	Q02908	557 aa	Known RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	YDR476C	Q03362	224 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	RPN9	Q04062	393 aa	Known RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	YPR172W	Q06608	200 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	SOR2	Q07786	357 aa		4.24	□□□□□ -1.73
BUD8	YLR353W	URA2	P07259	2214 aa	Known RBP	4.24	□□□□□ -1.73
BUD8	YLR353W	GCY1	P14065	312 aa	Known RBP RIP-Chip data	4.23	□□□□□ -1.73	not detected
BUD8	YLR353W	YCP4	P25349	247 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	MGR1	P25573	417 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	PHA2	P32452	334 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	MRPL4	P36517	319 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	GND1	P38720	489 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	DSE1	P40077	573 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	CWC21	Q03375	135 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	TRM82	Q03774	444 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	DBP9	Q06218	594 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	ATG17	Q06410	417 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	NRT1	Q08485	598 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	APC5	Q08683	685 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	TFB5	Q3E7C1	72 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	COX4	P04037	155 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	PDE2	P06776	526 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	REV1	P12689	985 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	AMD1	P15274	810 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	TFC1	P32367	649 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	PHO89	P38361	574 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	BZZ1	P38822	633 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	BTT1	P40314	149 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	PDS1	P40316	373 aa	Predicted RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	MAM33	P40513	266 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	BNA3	P47039	444 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	PEX31	P53203	462 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	ALG11	P53954	548 aa	Known RBP	4.23	□□□□□ -1.73
BUD8	YLR353W	YMR209C	Q03648	457 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	YMR087W	Q04299	284 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	YML096W	Q04489	525 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	MRPL1	Q04599	285 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	YMR254C	Q04838	102 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	YFH1	Q07540	174 aa		4.23	□□□□□ -1.73
BUD8	YLR353W	FRE1	P32791	686 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	RRF1	P38771	230 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	YDR089W	P38966	869 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	AVT2	P39981	480 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	NAS2	P40555	220 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	YFL012W	P43580	148 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	MDV1	P47025	714 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	TRF5	P48561	642 aa	Known RBP	4.22	□□□□□ -1.73
BUD8	YLR353W	PXR1	P53335	271 aa	Predicted RBP	4.22	□□□□□ -1.73
BUD8	YLR353W	YDR387C	Q04162	555 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	CDC123	Q05791	360 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	AAD15	Q08361	143 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	GET4	Q12125	312 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	PSY3	Q12318	242 aa		4.22	□□□□□ -1.73
BUD8	YLR353W	SEC62	P21825	274 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	RPI1	P23250	407 aa	Known RBP	4.21	□□□□□ -1.74
BUD8	YLR353W	APE2	P32454	952 aa	Known RBP	4.21	□□□□□ -1.74
BUD8	YLR353W	ECM25	P32525	599 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	YAT2	P40017	923 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	YER186C	P40101	306 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	GCN20	P43535	752 aa	Known RBP	4.21	□□□□□ -1.74
BUD8	YLR353W	RRT5	P43607	289 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	YIF1	P53845	314 aa	Known RBP	4.21	□□□□□ -1.74
BUD8	YLR353W	HER2	Q03557	464 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	TAF12	Q03761	539 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	CDD1	Q06549	142 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	SYO1	Q07395	620 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	UBX3	Q12229	455 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	ADF1	Q2V2Q1	113 aa		4.21	□□□□□ -1.74
BUD8	YLR353W	EFG1	Q3E705	233 aa	Known RBP	4.21	□□□□□ -1.74
BUD8	YLR353W	STF1	P01098	86 aa		4.21	□□□□□ -1.74

Retrieved 100 of 5,963 RNA–protein pairs in 24.5 ms