RNA–Protein interactions for RNA: YLR005W

SSL1, Transcript of Subunit of the core form of RNA polymerase transcription factor TFIIH, yeastyeast

Gene SSL1, Length 1,386 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SSL1YLR005W HOF1Q05080 669 aa3.49□□□□□ -1.85
SSL1YLR005W BUR2Q05949 395 aa3.49□□□□□ -1.85
SSL1YLR005W YDL086WQ07505 273 aa3.49□□□□□ -1.85
SSL1YLR005W APC9Q12107 265 aa3.49□□□□□ -1.85
SSL1YLR005W YRA1Q12159 226 aaKnown RBP3.49□□□□□ -1.85
SSL1YLR005W YRM1Q12340 786 aa3.49□□□□□ -1.85
SSL1YLR005W URA2P07259 2214 aaKnown RBP3.49□□□□□ -1.85
SSL1YLR005W RAS2P01120 322 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W CBP2P03874 630 aaPredicted RBP3.48□□□□□ -1.85
SSL1YLR005W MRP13P12686 339 aa3.48□□□□□ -1.85
SSL1YLR005W CBS1P14066 229 aa3.48□□□□□ -1.85
SSL1YLR005W DBR1P24309 405 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W RAD51P25454 400 aa3.48□□□□□ -1.85
SSL1YLR005W FEN2P25621 512 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W PTC6P25646 442 aa3.48□□□□□ -1.85
SSL1YLR005W SCO2P38072 301 aa3.48□□□□□ -1.85
SSL1YLR005W EXO84P38261 753 aa3.48□□□□□ -1.85
SSL1YLR005W YGP1P38616 354 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W SSZ1P38788 538 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W PAC2P39937 518 aa3.48□□□□□ -1.85
SSL1YLR005W AST2P39945 430 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W RIC1P40395 1056 aa3.48□□□□□ -1.85
SSL1YLR005W AYR1P40471 297 aa3.48□□□□□ -1.85
SSL1YLR005W YIL077CP40508 320 aa3.48□□□□□ -1.85
SSL1YLR005W REE1P40893 198 aa3.48□□□□□ -1.85
SSL1YLR005W MPA43P53583 542 aaPredicted RBP3.48□□□□□ -1.85
SSL1YLR005W SWP1Q02795 286 aa3.48□□□□□ -1.85
SSL1YLR005W RNY1Q02933 434 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W TVP15Q03860 143 aa3.48□□□□□ -1.85
SSL1YLR005W RRB1Q04225 511 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W PAL1Q05518 499 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W ATG38Q05789 226 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W VPS36Q06696 566 aa3.48□□□□□ -1.85
SSL1YLR005W COS7Q07788 383 aa3.48□□□□□ -1.85
SSL1YLR005W FMP40Q08968 688 aaPredicted RBP3.48□□□□□ -1.85
SSL1YLR005W TMA7Q3E764 64 aaKnown RBP3.48□□□□□ -1.85
SSL1YLR005W SAS5Q99314 248 aa3.48□□□□□ -1.85
SSL1YLR005W ARF1P11076 181 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W GAL3P13045 520 aa3.47□□□□□ -1.85
SSL1YLR005W NCP1P16603 691 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W RPA135P22138 1203 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W PRP28P23394 588 aa3.47□□□□□ -1.85
SSL1YLR005W SEC17P32602 292 aa3.47□□□□□ -1.85
SSL1YLR005W MTR2P34232 184 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W TEF4P36008 412 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W APD1P38281 316 aa3.47□□□□□ -1.85
SSL1YLR005W PRS3P38689 320 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W BZZ1P38822 633 aa3.47□□□□□ -1.85
SSL1YLR005W YJL193WP39542 402 aa3.47□□□□□ -1.85
SSL1YLR005W SEN34P39707 275 aa3.47□□□□□ -1.85
SSL1YLR005W AIM2P39721 246 aa3.47□□□□□ -1.85
SSL1YLR005W YER010CP40011 234 aa3.47□□□□□ -1.85
SSL1YLR005W LYS12P40495 371 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W LSG1P53145 640 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W CDH1P53197 566 aa3.47□□□□□ -1.85
SSL1YLR005W YGR066CP53242 292 aa3.47□□□□□ -1.85
SSL1YLR005W RHO5P53879 331 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W MOT3P54785 490 aaKnown RBP3.47□□□□□ -1.85
SSL1YLR005W NCE101Q02820 53 aa3.47□□□□□ -1.85
SSL1YLR005W SDC1Q03323 175 aa3.47□□□□□ -1.85
SSL1YLR005W URC2Q04411 772 aa3.47□□□□□ -1.85
SSL1YLR005W YLR413WQ06689 675 aa3.47□□□□□ -1.85
SSL1YLR005W RRG7Q08774 242 aaPredicted RBP3.47□□□□□ -1.85
SSL1YLR005W YOR378WQ08902 515 aa3.47□□□□□ -1.85
SSL1YLR005W NCE102Q12207 173 aaRIP-Chip data3.47□□□□□ -1.85not detected
SSL1YLR005W YOR214CQ12282 236 aa3.47□□□□□ -1.85
SSL1YLR005W SPO24Q3E752 67 aa3.47□□□□□ -1.85
SSL1YLR005W PDX1P16451 410 aa3.46□□□□□ -1.86
SSL1YLR005W YAP1P19880 650 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W KGD1P20967 1014 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W UTR1P21373 530 aa3.46□□□□□ -1.86
SSL1YLR005W AIM17P23180 465 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W CTR86P25355 563 aa3.46□□□□□ -1.86
SSL1YLR005W DTR1P38125 572 aa3.46□□□□□ -1.86
SSL1YLR005W STP2P38704 541 aa3.46□□□□□ -1.86
SSL1YLR005W SEC31P38968 1273 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W MIT1P40002 666 aa3.46□□□□□ -1.86
SSL1YLR005W YIL169CP40442 995 aa3.46□□□□□ -1.86
SSL1YLR005W GZF3P42944 551 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W PAC10P48363 199 aa3.46□□□□□ -1.86
SSL1YLR005W CUS2P53830 285 aaPredicted RBP3.46□□□□□ -1.86
SSL1YLR005W YNL010WP53981 241 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W YDR476CQ03362 224 aa3.46□□□□□ -1.86
SSL1YLR005W STE23Q06010 1027 aa3.46□□□□□ -1.86
SSL1YLR005W PML1Q07930 204 aaPredicted RBP3.46□□□□□ -1.86
SSL1YLR005W YLR036CQ07986 203 aa3.46□□□□□ -1.86
SSL1YLR005W OSW1Q08692 278 aa3.46□□□□□ -1.86
SSL1YLR005W PFK27Q12471 397 aaPredicted RBP3.46□□□□□ -1.86
SSL1YLR005W RPS21BQ3E754 87 aaKnown RBP3.46□□□□□ -1.86
SSL1YLR005W HEM4P06174 275 aa3.45□□□□□ -1.86
SSL1YLR005W BAR1P12630 587 aa3.45□□□□□ -1.86
SSL1YLR005W SPS100P13130 326 aa3.45□□□□□ -1.86
SSL1YLR005W KSS1P14681 368 aa3.45□□□□□ -1.86
SSL1YLR005W RPI1P23250 407 aaKnown RBP3.45□□□□□ -1.86
SSL1YLR005W EHD3P28817 500 aa3.45□□□□□ -1.86
SSL1YLR005W HSP150P32478 413 aa3.45□□□□□ -1.86
SSL1YLR005W NUP2P32499 720 aa3.45□□□□□ -1.86
SSL1YLR005W MRPL39P36533 70 aa3.45□□□□□ -1.86
SSL1YLR005W ARN1P38731 627 aa3.45□□□□□ -1.86
SSL1YLR005W NSG1P38837 291 aa3.45□□□□□ -1.86
Retrieved 100 of 5,963 RNA–protein pairs in 41.4 ms