RNA–Protein interactions for RNA: YKR056W

TRM2, Transcript of tRNA methyltransferase, yeastyeast

Gene TRM2, Length 1,920 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
TRM2YKR056W YIR016WP40572 265 aa2.36□□□□□ -2.03
TRM2YKR056W AZF1P41696 914 aa2.36□□□□□ -2.03
TRM2YKR056W SFH5P47008 294 aa2.36□□□□□ -2.03
TRM2YKR056W TRM112P53738 135 aaPredicted RBP2.36□□□□□ -2.03
TRM2YKR056W NOP13P53883 403 aaKnown RBP RIP-Chip data2.36□□□□□ -2.03not detected
TRM2YKR056W SED5Q01590 340 aa2.36□□□□□ -2.03
TRM2YKR056W PAM18Q07914 168 aa2.36□□□□□ -2.03
TRM2YKR056W YEH2Q07950 538 aa2.36□□□□□ -2.03
TRM2YKR056W CRC1Q12289 327 aa2.36□□□□□ -2.03
TRM2YKR056W RPN6Q12377 434 aa2.36□□□□□ -2.03
TRM2YKR056W SSK22P25390 1331 aaPredicted RBP2.35□□□□□ -2.03
TRM2YKR056W HPR1P17629 752 aaKnown RBP2.35□□□□□ -2.03
TRM2YKR056W POP5P28005 173 aa2.35□□□□□ -2.03
TRM2YKR056W ERG9P29704 444 aa2.35□□□□□ -2.03
TRM2YKR056W AIM29P36154 155 aa2.35□□□□□ -2.03
TRM2YKR056W CHK1P38147 527 aa2.35□□□□□ -2.03
TRM2YKR056W LDB7P38210 180 aa2.35□□□□□ -2.03
TRM2YKR056W TCD1P38756 429 aa2.35□□□□□ -2.03
TRM2YKR056W SNO3P43544 222 aa2.35□□□□□ -2.03
TRM2YKR056W MRX5P47007 382 aa2.35□□□□□ -2.03
TRM2YKR056W COX16P47081 118 aa2.35□□□□□ -2.03
TRM2YKR056W POP6P53218 158 aa2.35□□□□□ -2.03
TRM2YKR056W GIM3P53900 129 aa2.35□□□□□ -2.03
TRM2YKR056W PIR3Q03180 325 aa2.35□□□□□ -2.03
TRM2YKR056W VBA1Q04301 562 aa2.35□□□□□ -2.03
TRM2YKR056W GTO3Q04806 366 aa2.35□□□□□ -2.03
TRM2YKR056W SSQ1Q05931 657 aaPredicted RBP2.35□□□□□ -2.03
TRM2YKR056W GRS2Q06817 618 aa2.35□□□□□ -2.03
TRM2YKR056W MDM36Q06820 579 aa2.35□□□□□ -2.03
TRM2YKR056W YOR387CQ08910 206 aa2.35□□□□□ -2.03
TRM2YKR056W SLM3Q12093 417 aa2.35□□□□□ -2.03
TRM2YKR056W APC9Q12107 265 aa2.35□□□□□ -2.03
TRM2YKR056W MSH5Q12175 901 aa2.35□□□□□ -2.03
TRM2YKR056W RPL31AP0C2H8 113 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W FUS3P16892 353 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W RPO26P20435 155 aa2.34□□□□□ -2.03
TRM2YKR056W CHA1P25379 360 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W ACB1P31787 87 aa2.34□□□□□ -2.03
TRM2YKR056W ARC19P33204 171 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W RPC37P36121 282 aa2.34□□□□□ -2.03
TRM2YKR056W RCK2P38623 610 aa2.34□□□□□ -2.03
TRM2YKR056W YIR014WP40570 242 aa2.34□□□□□ -2.03
TRM2YKR056W WWM1P43582 211 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W HAM1P47119 197 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W TRF5P48561 642 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W LSG1P53145 640 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W YMR181CQ03231 154 aa2.34□□□□□ -2.03
TRM2YKR056W RIM13Q03792 727 aa2.34□□□□□ -2.03
TRM2YKR056W HCR1Q05775 265 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W YPQ1Q12010 308 aa2.34□□□□□ -2.03
TRM2YKR056W RGT2Q12300 763 aa2.34□□□□□ -2.03
TRM2YKR056W MEX67Q99257 599 aaKnown RBP2.34□□□□□ -2.03
TRM2YKR056W RHO1P06780 209 aaKnown RBP2.34□□□□□ -2.04
TRM2YKR056W PUT3P25502 979 aaPredicted RBP2.34□□□□□ -2.04
TRM2YKR056W ZIP1P31111 875 aa2.34□□□□□ -2.04
TRM2YKR056W MRPL6P32904 214 aa2.34□□□□□ -2.04
TRM2YKR056W YKL187CP34231 750 aa2.34□□□□□ -2.04
TRM2YKR056W MTC4P38335 694 aaKnown RBP2.34□□□□□ -2.04
TRM2YKR056W RTC3P38804 111 aaPredicted RBP2.34□□□□□ -2.04
TRM2YKR056W YPT35P38815 214 aaKnown RBP2.34□□□□□ -2.04
TRM2YKR056W TES1P41903 349 aaKnown RBP2.34□□□□□ -2.04
TRM2YKR056W GLG2P47011 380 aa2.34□□□□□ -2.04
TRM2YKR056W IKS1P47042 667 aa2.34□□□□□ -2.04
TRM2YKR056W RTT103Q05543 409 aa2.34□□□□□ -2.04
TRM2YKR056W BER1Q06688 274 aaKnown RBP2.34□□□□□ -2.04
TRM2YKR056W SNX3Q08826 162 aaKnown RBP2.34□□□□□ -2.04
TRM2YKR056W CSR2Q12734 1121 aa2.34□□□□□ -2.04
TRM2YKR056W REP1P03871 373 aa2.33□□□□□ -2.04
TRM2YKR056W RPP0P05317 312 aaKnown RBP2.33□□□□□ -2.04
TRM2YKR056W DAL82P21705 255 aa2.33□□□□□ -2.04
TRM2YKR056W PBN1P25580 416 aa2.33□□□□□ -2.04
TRM2YKR056W PRO3P32263 286 aaKnown RBP2.33□□□□□ -2.04
TRM2YKR056W SWD2P36104 329 aaPredicted RBP2.33□□□□□ -2.04
TRM2YKR056W RIB5P38145 238 aa2.33□□□□□ -2.04
TRM2YKR056W MIX23P38162 196 aa2.33□□□□□ -2.04
TRM2YKR056W PFS1P38872 237 aa2.33□□□□□ -2.04
TRM2YKR056W MET30P39014 640 aa2.33□□□□□ -2.04
TRM2YKR056W RPR2P40571 144 aa2.33□□□□□ -2.04
TRM2YKR056W OST1P41543 476 aaKnown RBP2.33□□□□□ -2.04
TRM2YKR056W GDS1P41913 522 aa2.33□□□□□ -2.04
TRM2YKR056W CIN2P46670 268 aa2.33□□□□□ -2.04
TRM2YKR056W HIT1P46973 164 aa2.33□□□□□ -2.04
TRM2YKR056W CGR1P53188 120 aa2.33□□□□□ -2.04
TRM2YKR056W ALG11P53954 548 aaKnown RBP2.33□□□□□ -2.04
TRM2YKR056W IRC4Q03036 179 aa2.33□□□□□ -2.04
TRM2YKR056W OST6Q03723 332 aa2.33□□□□□ -2.04
TRM2YKR056W SLF1Q12034 447 aaKnown RBP2.33□□□□□ -2.04
TRM2YKR056W AYT1Q12226 474 aa2.33□□□□□ -2.04
TRM2YKR056W YOS9Q99220 542 aa2.33□□□□□ -2.04
TRM2YKR056W CYC3P06182 269 aa2.32□□□□□ -2.04
TRM2YKR056W TCP1P12612 559 aaKnown RBP2.32□□□□□ -2.04
TRM2YKR056W PRR1P28708 518 aa2.32□□□□□ -2.04
TRM2YKR056W YPC1P38298 316 aa2.32□□□□□ -2.04
TRM2YKR056W NPT1P39683 429 aaKnown RBP2.32□□□□□ -2.04
TRM2YKR056W YER184CP39961 794 aa2.32□□□□□ -2.04
TRM2YKR056W NBP1P52919 319 aaPredicted RBP2.32□□□□□ -2.04
TRM2YKR056W YNL040WP53960 456 aaPredicted RBP2.32□□□□□ -2.04
TRM2YKR056W SLT2Q00772 484 aa2.32□□□□□ -2.04
TRM2YKR056W TDA1Q03533 586 aa2.32□□□□□ -2.04
TRM2YKR056W RTN1Q04947 295 aaKnown RBP2.32□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 79.6 ms