RNA–Protein interactions for RNA: YKL173W

SNU114, Transcript of GTPase component of U5 snRNP involved in mRNA splicing via spliceosome, yeastyeast

Gene SNU114, Length 3,027 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SNU114YKL173W AAD15Q08361 143 aa2.15□□□□□ -2.07
SNU114YKL173W NRT1Q08485 598 aa2.15□□□□□ -2.07
SNU114YKL173W CMC2Q3E7A4 109 aa2.15□□□□□ -2.07
SNU114YKL173W YOR338WQ99326 363 aa2.15□□□□□ -2.07
SNU114YKL173W HEM2P05373 342 aa2.14□□□□□ -2.07
SNU114YKL173W MSF1P08425 469 aa2.14□□□□□ -2.07
SNU114YKL173W DSF1P0CX08 502 aa2.14□□□□□ -2.07
SNU114YKL173W YNR073CP0CX09 502 aa2.14□□□□□ -2.07
SNU114YKL173W MRS3P10566 314 aa2.14□□□□□ -2.07
SNU114YKL173W POL30P15873 258 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W CDC42P19073 191 aa2.14□□□□□ -2.07
SNU114YKL173W RVS161P25343 265 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W ATS1P31386 333 aa2.14□□□□□ -2.07
SNU114YKL173W PRS1P32895 427 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W NUF2P33895 451 aa2.14□□□□□ -2.07
SNU114YKL173W MRPL10P36520 322 aa2.14□□□□□ -2.07
SNU114YKL173W YHR182WP38870 785 aa2.14□□□□□ -2.07
SNU114YKL173W YND1P40009 630 aa2.14□□□□□ -2.07
SNU114YKL173W YNL146WP53906 100 aa2.14□□□□□ -2.07
SNU114YKL173W IZH1Q03419 316 aa2.14□□□□□ -2.07
SNU114YKL173W RRP17Q04031 235 aaPredicted RBP2.14□□□□□ -2.07
SNU114YKL173W TIP41Q12199 356 aa2.14□□□□□ -2.07
SNU114YKL173W ATG31Q12421 196 aa2.14□□□□□ -2.07
SNU114YKL173W HIS4P00815 799 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W RSR1P13856 272 aa2.14□□□□□ -2.07
SNU114YKL173W PRP16P15938 1071 aaPredicted RBP2.14□□□□□ -2.07
SNU114YKL173W LSB5P25369 354 aa2.14□□□□□ -2.07
SNU114YKL173W RPS5P26783 225 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W IMP3P32899 183 aaPredicted RBP2.14□□□□□ -2.07
SNU114YKL173W PAD1P33751 242 aaKnown RBP RIP-Chip data2.14□□□□□ -2.07not detected
SNU114YKL173W YCR041WP37265 110 aa2.14□□□□□ -2.07
SNU114YKL173W GPX2P38143 162 aa2.14□□□□□ -2.07
SNU114YKL173W YBR137WP38276 179 aa2.14□□□□□ -2.07
SNU114YKL173W EGD2P38879 174 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W FET3P38993 636 aa2.14□□□□□ -2.07
SNU114YKL173W END3P39013 349 aa2.14□□□□□ -2.07
SNU114YKL173W YMR134WP40207 237 aa2.14□□□□□ -2.07
SNU114YKL173W YCH1P42937 148 aa2.14□□□□□ -2.07
SNU114YKL173W SCS3P53012 380 aa2.14□□□□□ -2.07
SNU114YKL173W VOA1P53262 265 aa2.14□□□□□ -2.07
SNU114YKL173W YNL134CP53912 376 aaKnown RBP2.14□□□□□ -2.07
SNU114YKL173W CSI1Q04368 295 aa2.14□□□□□ -2.07
SNU114YKL173W FMP16Q12497 93 aa2.14□□□□□ -2.07
SNU114YKL173W GDH1P07262 454 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W SSC1P0CS90 654 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W DAL2P25335 343 aa2.13□□□□□ -2.07
SNU114YKL173W CIN8P27895 1000 aa2.13□□□□□ -2.07
SNU114YKL173W MRPS5P33759 307 aa2.13□□□□□ -2.07
SNU114YKL173W SIP2P34164 415 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W YPK3P38070 525 aa2.13□□□□□ -2.07
SNU114YKL173W ARC40P38328 384 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W HAT2P39984 401 aa2.13□□□□□ -2.07
SNU114YKL173W GWT1P47026 490 aa2.13□□□□□ -2.07
SNU114YKL173W MPP6P53725 186 aaPredicted RBP2.13□□□□□ -2.07
SNU114YKL173W SKI8Q02793 397 aaPredicted RBP2.13□□□□□ -2.07
SNU114YKL173W SMP3Q04174 516 aa2.13□□□□□ -2.07
SNU114YKL173W YLR283WQ05867 314 aa2.13□□□□□ -2.07
SNU114YKL173W SEC10Q06245 871 aa2.13□□□□□ -2.07
SNU114YKL173W CMS1Q07897 291 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W SDO1Q07953 250 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W YOL075CQ08234 1294 aa2.13□□□□□ -2.07
SNU114YKL173W ARP6Q12509 438 aa2.13□□□□□ -2.07
SNU114YKL173W YOS9Q99220 542 aa2.13□□□□□ -2.07
SNU114YKL173W DET1Q99288 334 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W TSC11P40061 1430 aa2.13□□□□□ -2.07
SNU114YKL173W MAS2P11914 482 aa2.13□□□□□ -2.07
SNU114YKL173W FRS2P15625 503 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W ADE1P27616 306 aa2.13□□□□□ -2.07
SNU114YKL173W GDH2P33327 1092 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W LYS1P38998 373 aaRIP-Chip data2.13□□□□□ -2.07not detected
SNU114YKL173W CCT4P39078 528 aaKnown RBP2.13□□□□□ -2.07
SNU114YKL173W YAR1P46683 200 aa2.13□□□□□ -2.07
SNU114YKL173W NAS6P50086 228 aa2.13□□□□□ -2.07
SNU114YKL173W DIA1P54005 336 aa2.13□□□□□ -2.07
SNU114YKL173W ODC1Q03028 310 aa2.13□□□□□ -2.07
SNU114YKL173W ATC1Q04005 294 aa2.13□□□□□ -2.07
SNU114YKL173W APC4Q04601 652 aa2.13□□□□□ -2.07
SNU114YKL173W NAT4Q04751 285 aa2.13□□□□□ -2.07
SNU114YKL173W GTO3Q04806 366 aa2.13□□□□□ -2.07
SNU114YKL173W GAT3Q07928 141 aa2.13□□□□□ -2.07
SNU114YKL173W VIK1Q12045 647 aa2.13□□□□□ -2.07
SNU114YKL173W RRP5Q05022 1729 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W STE2D6VTK4 431 aa2.12□□□□□ -2.07
SNU114YKL173W RNA14P25298 677 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W YCR100CP25606 316 aa2.12□□□□□ -2.07
SNU114YKL173W PEX3P28795 441 aa2.12□□□□□ -2.07
SNU114YKL173W SEC1P30619 724 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W ECT1P33412 323 aa2.12□□□□□ -2.07
SNU114YKL173W CHK1P38147 527 aa2.12□□□□□ -2.07
SNU114YKL173W RTC2P38279 296 aa2.12□□□□□ -2.07
SNU114YKL173W LYS12P40495 371 aaKnown RBP2.12□□□□□ -2.07
SNU114YKL173W DSN1P40568 576 aa2.12□□□□□ -2.07
SNU114YKL173W TMA22P47089 198 aaPredicted RBP2.12□□□□□ -2.07
SNU114YKL173W VPS25P47142 202 aa2.12□□□□□ -2.07
SNU114YKL173W PET117Q02771 107 aa2.12□□□□□ -2.07
SNU114YKL173W ECM11Q04110 302 aa2.12□□□□□ -2.07
SNU114YKL173W GLO2Q05584 274 aa2.12□□□□□ -2.07
SNU114YKL173W ATG17Q06410 417 aa2.12□□□□□ -2.07
SNU114YKL173W MRPL35Q06678 367 aa2.12□□□□□ -2.07
SNU114YKL173W DNL4Q08387 944 aaPredicted RBP2.12□□□□□ -2.07
Retrieved 100 of 5,963 RNA–protein pairs in 17.1 ms