RNA–Protein interactions for RNA: YKL108W

SLD2, Transcript of Single-stranded DNA origin-binding and annealing protein, yeast

Gene SLD2, Length 1,362 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SLD2	YKL108W	PGK1	P00560	416 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	CDC23	P16522	626 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	MDM10	P18409	493 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	AIM17	P23180	465 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	RVS161	P25343	265 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	ILV6	P25605	309 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	YCR016W	P25617	290 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	TRS65	P32893	560 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	BMH2	P34730	273 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	YHR182W	P38870	785 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	PRM9	P39551	298 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	FMC1	P40491	155 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	YIR016W	P40572	265 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	KEG1	P43614	200 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	MRX5	P47007	382 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	SEH1	P53011	349 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	BIO4	P53630	237 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	TRM112	P53738	135 aa	Predicted RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	UBX2	Q04228	584 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	BCH1	Q05029	724 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	SNX3	Q08826	162 aa	Known RBP	4.64	□□□□□ -1.67
SLD2	YKL108W	YOR029W	Q12243	111 aa		4.64	□□□□□ -1.67
SLD2	YKL108W	PAB1	P04147	577 aa	Known RBP RIP-Chip data	4.63	□□□□□ -1.67	not detected
SLD2	YKL108W	PRR1	P28708	518 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	PEX2	P32800	271 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	PTR2	P32901	601 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	YKL071W	P36086	256 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	SWD2	P36104	329 aa	Predicted RBP	4.63	□□□□□ -1.67
SLD2	YKL108W	YKR015C	P36111	568 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	DTR1	P38125	572 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	MTC6	P38849	526 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	SLM1	P40485	686 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	YCH1	P42937	148 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	COX16	P47081	118 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	YJR030C	P47101	745 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	MKC7	P53379	596 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	YPL080C	Q02826	108 aa		4.63	□□□□□ -1.67
SLD2	YKL108W	ESC1	Q03661	1658 aa	Known RBP	4.62	□□□□□ -1.67
SLD2	YKL108W	TY3B-G	Q99315	1547 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	CDC36	P06100	191 aa	Predicted RBP	4.62	□□□□□ -1.67
SLD2	YKL108W	ACB1	P31787	87 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	SMF2	P38778	549 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	MSS2	P40990	351 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	OST1	P41543	476 aa	Known RBP	4.62	□□□□□ -1.67
SLD2	YKL108W	YGR210C	P42942	411 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	CGR1	P53188	120 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	COS1	P53822	381 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	GOR1	P53839	350 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	HXT11	P54862	567 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	DIG1	Q03063	452 aa	Known RBP	4.62	□□□□□ -1.67
SLD2	YKL108W	SRL4	Q03085	281 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	CSM3	Q04659	317 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	CMS1	Q07897	291 aa	Known RBP	4.62	□□□□□ -1.67
SLD2	YKL108W	RAX1	Q08760	435 aa		4.62	□□□□□ -1.67
SLD2	YKL108W	ULS1	Q08562	1619 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	RAD3	P06839	778 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	ITR2	P30606	609 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	NDC1	P32500	655 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	ZRT1	P32804	376 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	ALG8	P40351	577 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	KAP114	P53067	1004 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	OKP1	P53298	406 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	SED5	Q01590	340 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	YMR209C	Q03648	457 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	GMC2	Q06201	188 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	ATG31	Q12421	196 aa		4.61	□□□□□ -1.67
SLD2	YKL108W	ADH2	P00331	348 aa	Known RBP	4.6	□□□□□ -1.67
SLD2	YKL108W	COX2	P00410	251 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	MRPL25	P23369	157 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	RBK1	P25332	333 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	RAD51	P25454	400 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	PUT3	P25502	979 aa	Predicted RBP	4.6	□□□□□ -1.67
SLD2	YKL108W	KRE6	P32486	720 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	MRPL10	P36520	322 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	YBR137W	P38276	179 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	BIG1	P38813	335 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	YPT35	P38815	214 aa	Known RBP	4.6	□□□□□ -1.67
SLD2	YKL108W	YIL169C	P40442	995 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	HYR1	P40581	163 aa	Known RBP	4.6	□□□□□ -1.67
SLD2	YKL108W	AGP3	P43548	558 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	MDV1	P47025	714 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	GIM3	P53900	129 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	YMR181C	Q03231	154 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	BER1	Q06688	274 aa	Known RBP	4.6	□□□□□ -1.67
SLD2	YKL108W	YLR108C	Q12259	485 aa		4.6	□□□□□ -1.67
SLD2	YKL108W	VPS1	P21576	704 aa	Known RBP	4.59	□□□□□ -1.67
SLD2	YKL108W	DCC1	P25559	380 aa		4.59	□□□□□ -1.67
SLD2	YKL108W	ATS1	P31386	333 aa		4.59	□□□□□ -1.67
SLD2	YKL108W	GCG1	P32656	232 aa	Known RBP	4.59	□□□□□ -1.67
SLD2	YKL108W	CYM1	P32898	989 aa		4.59	□□□□□ -1.67
SLD2	YKL108W	MTC4	P38335	694 aa	Known RBP	4.59	□□□□□ -1.67
SLD2	YKL108W	XBP1	P40489	647 aa		4.59	□□□□□ -1.67
SLD2	YKL108W	TRF5	P48561	642 aa	Known RBP	4.59	□□□□□ -1.67
SLD2	YKL108W	PGA2	P53903	129 aa		4.59	□□□□□ -1.67
SLD2	YKL108W	MYO5	Q04439	1219 aa	Known RBP	4.59	□□□□□ -1.67
SLD2	YKL108W	SML1	Q04964	104 aa		4.59	□□□□□ -1.67
SLD2	YKL108W	ROM2	P51862	1356 aa	Known RBP	4.58	□□□□□ -1.68
SLD2	YKL108W	YFL068W	P0CX99	160 aa		4.58	□□□□□ -1.68
SLD2	YKL108W	YLL066W-A	P0CY00	160 aa		4.58	□□□□□ -1.68
SLD2	YKL108W	YLL067W-A	P0CY01	160 aa		4.58	□□□□□ -1.68

Retrieved 100 of 5,963 RNA–protein pairs in 49.5 ms