RNA–Protein interactions for RNA: YHL006C

SHU1, Transcript of Component of Shu complex (aka PCSS complex), yeastyeast

Gene SHU1, Length 453 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SHU1YHL006C HSP30P25619 332 aa11.83□□□□□ -0.52
SHU1YHL006C MTR2P34232 184 aaKnown RBP11.83□□□□□ -0.52
SHU1YHL006C MTC6P38849 526 aa11.83□□□□□ -0.52
SHU1YHL006C GTR1Q00582 310 aa11.83□□□□□ -0.52
SHU1YHL006C SPR6Q01684 191 aa11.83□□□□□ -0.52
SHU1YHL006C YMR265CQ03508 461 aaKnown RBP11.83□□□□□ -0.52
SHU1YHL006C RSA1Q08932 381 aa11.83□□□□□ -0.52
SHU1YHL006C PFK27Q12471 397 aaPredicted RBP11.83□□□□□ -0.52
SHU1YHL006C ADF1Q2V2Q1 113 aa11.83□□□□□ -0.52
SHU1YHL006C PWP1P21304 576 aaKnown RBP11.82□□□□□ -0.52
SHU1YHL006C GAS1P22146 559 aaKnown RBP11.82□□□□□ -0.52
SHU1YHL006C ITR2P30606 609 aa11.82□□□□□ -0.52
SHU1YHL006C MDL1P33310 695 aa11.82□□□□□ -0.52
SHU1YHL006C YEL068CP39977 110 aa11.82□□□□□ -0.52
SHU1YHL006C COG3P40094 801 aa11.82□□□□□ -0.52
SHU1YHL006C NOP9P47077 666 aaKnown RBP11.82□□□□□ -0.52
SHU1YHL006C SPC2Q04969 178 aa11.82□□□□□ -0.52
SHU1YHL006C EMG1Q06287 252 aaKnown RBP11.82□□□□□ -0.52
SHU1YHL006C DET1Q99288 334 aaKnown RBP11.82□□□□□ -0.52
SHU1YHL006C YAL064W-BO13512 126 aa11.81□□□□□ -0.52
SHU1YHL006C YCR100CP25606 316 aa11.81□□□□□ -0.52
SHU1YHL006C IDH1P28834 360 aaKnown RBP RIP-Chip data11.81□□□□□ -0.52not detected
SHU1YHL006C NTG1P31378 399 aa11.81□□□□□ -0.52
SHU1YHL006C HBS1P32769 611 aaKnown RBP11.81□□□□□ -0.52
SHU1YHL006C TIM12P32830 109 aa11.81□□□□□ -0.52
SHU1YHL006C YGP1P38616 354 aaKnown RBP11.81□□□□□ -0.52
SHU1YHL006C SKN7P38889 622 aa11.81□□□□□ -0.52
SHU1YHL006C NAN1Q02931 896 aaKnown RBP11.81□□□□□ -0.52
SHU1YHL006C API2Q04413 109 aa11.81□□□□□ -0.52
SHU1YHL006C RAF1Q06891 181 aa11.81□□□□□ -0.52
SHU1YHL006C SKI7Q08491 747 aaPredicted RBP11.81□□□□□ -0.52
SHU1YHL006C MET2P08465 486 aa11.8□□□□□ -0.52
SHU1YHL006C TFS1P14306 219 aa11.8□□□□□ -0.52
SHU1YHL006C YPK2P18961 677 aa11.8□□□□□ -0.52
SHU1YHL006C COS9P36034 407 aa11.8□□□□□ -0.52
SHU1YHL006C FZO1P38297 855 aa11.8□□□□□ -0.52
SHU1YHL006C RCY1P39531 840 aa11.8□□□□□ -0.52
SHU1YHL006C GCN20P43535 752 aaKnown RBP11.8□□□□□ -0.52
SHU1YHL006C RBG2P53295 368 aaKnown RBP11.8□□□□□ -0.52
SHU1YHL006C SNF12P53628 566 aa11.8□□□□□ -0.52
SHU1YHL006C VBA4Q04602 768 aaKnown RBP11.8□□□□□ -0.52
SHU1YHL006C COQ11Q05892 277 aa11.8□□□□□ -0.52
SHU1YHL006C SYO1Q07395 620 aa11.8□□□□□ -0.52
SHU1YHL006C IRC19Q07843 230 aa11.8□□□□□ -0.52
SHU1YHL006C NTG2Q08214 380 aa11.8□□□□□ -0.52
SHU1YHL006C RLM1Q12224 676 aa11.8□□□□□ -0.52
SHU1YHL006C RHO1P06780 209 aaKnown RBP11.79□□□□□ -0.52
SHU1YHL006C TFC1P32367 649 aa11.79□□□□□ -0.52
SHU1YHL006C MRPL39P36533 70 aa11.79□□□□□ -0.52
SHU1YHL006C YHL037CP38733 133 aa11.79□□□□□ -0.52
SHU1YHL006C PEX18P38855 283 aa11.79□□□□□ -0.52
SHU1YHL006C BLM10P43583 2143 aa11.79□□□□□ -0.52
SHU1YHL006C YKR011CQ02209 353 aa11.79□□□□□ -0.52
SHU1YHL006C DBP9Q06218 594 aaKnown RBP11.79□□□□□ -0.52
SHU1YHL006C SWA2Q06677 668 aa11.79□□□□□ -0.52
SHU1YHL006C SEC16P48415 2195 aaKnown RBP11.78□□□□□ -0.52
SHU1YHL006C ARC19P33204 171 aaKnown RBP11.78□□□□□ -0.52
SHU1YHL006C ECM15P35195 104 aa11.78□□□□□ -0.52
SHU1YHL006C RBG1P39729 369 aa11.78□□□□□ -0.52
SHU1YHL006C YFL051CP43552 160 aa11.78□□□□□ -0.52
SHU1YHL006C DSL1P53847 754 aa11.78□□□□□ -0.52
SHU1YHL006C SCS7Q03529 384 aa11.78□□□□□ -0.52
SHU1YHL006C NCE102Q12207 173 aaRIP-Chip data11.78□□□□□ -0.52not detected
SHU1YHL006C YOR343CQ12484 108 aa11.78□□□□□ -0.52
SHU1YHL006C SIR3P06701 978 aa11.77□□□□□ -0.53
SHU1YHL006C RPB8P20436 146 aa11.77□□□□□ -0.53
SHU1YHL006C RHB1P25378 209 aa11.77□□□□□ -0.53
SHU1YHL006C CYS4P32582 507 aaKnown RBP11.77□□□□□ -0.53
SHU1YHL006C SLC1P33333 303 aa11.77□□□□□ -0.53
SHU1YHL006C HIS7P33734 552 aaKnown RBP11.77□□□□□ -0.53
SHU1YHL006C PDX3P38075 228 aaKnown RBP11.77□□□□□ -0.53
SHU1YHL006C YMR144WP40214 342 aaKnown RBP11.77□□□□□ -0.53
SHU1YHL006C GPP1P41277 250 aaKnown RBP11.77□□□□□ -0.53
SHU1YHL006C CAK1P43568 368 aaPredicted RBP11.77□□□□□ -0.53
SHU1YHL006C INN1P53901 409 aa11.77□□□□□ -0.53
SHU1YHL006C YNL095CP53932 642 aa11.77□□□□□ -0.53
SHU1YHL006C UTP21Q06078 939 aaPredicted RBP11.77□□□□□ -0.53
SHU1YHL006C MRL1Q06815 381 aa11.77□□□□□ -0.53
SHU1YHL006C YDL180WQ12301 547 aa11.77□□□□□ -0.53
SHU1YHL006C SNC1P31109 117 aa11.76□□□□□ -0.53
SHU1YHL006C CHK1P38147 527 aa11.76□□□□□ -0.53
SHU1YHL006C SRO77P38163 1010 aa11.76□□□□□ -0.53
SHU1YHL006C ALP1P38971 573 aa11.76□□□□□ -0.53
SHU1YHL006C SWD1P39706 426 aa11.76□□□□□ -0.53
SHU1YHL006C YIL166CP40445 542 aa11.76□□□□□ -0.53
SHU1YHL006C ADO1P47143 340 aaKnown RBP11.76□□□□□ -0.53
SHU1YHL006C YGL235WP53071 178 aa11.76□□□□□ -0.53
SHU1YHL006C KAP120Q02932 1032 aa11.76□□□□□ -0.53
SHU1YHL006C RRN5Q02983 363 aa11.76□□□□□ -0.53
SHU1YHL006C COQ10Q08058 207 aa11.76□□□□□ -0.53
SHU1YHL006C REC107P21651 314 aa11.75□□□□□ -0.53
SHU1YHL006C DPH5P32469 300 aaPredicted RBP11.75□□□□□ -0.53
SHU1YHL006C MAE1P36013 669 aaKnown RBP11.75□□□□□ -0.53
SHU1YHL006C GPX1P36014 167 aa11.75□□□□□ -0.53
SHU1YHL006C JEN1P36035 616 aa11.75□□□□□ -0.53
SHU1YHL006C YBR241CP38142 488 aa11.75□□□□□ -0.53
SHU1YHL006C YHL012WP38709 493 aa11.75□□□□□ -0.53
SHU1YHL006C LSM4P40070 187 aaKnown RBP11.75□□□□□ -0.53
SHU1YHL006C MPP6P53725 186 aaPredicted RBP11.75□□□□□ -0.53
SHU1YHL006C YNR062CP53748 327 aa11.75□□□□□ -0.53
Retrieved 100 of 5,963 RNA–protein pairs in 42.6 ms