RNA–Protein interactions for RNA: YGR143W

SKN1, Transcript of Protein involved in sphingolipid biosynthesis, yeastyeast

Gene SKN1, Length 2,316 nt, Biotype protein coding, Subcellular localisation Mitochondria .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SKN1YGR143W COQ3P27680 312 aa5.55□□□□□ -1.52
SKN1YGR143W NAB2P32505 525 aaKnown RBP RIP-Chip data5.55□□□□□ -1.52not detected
SKN1YGR143W TCD2P36101 447 aaKnown RBP5.55□□□□□ -1.52
SKN1YGR143W PET10P36139 283 aa5.55□□□□□ -1.52
SKN1YGR143W NSG1P38837 291 aa5.55□□□□□ -1.52
SKN1YGR143W TAT2P38967 592 aa5.55□□□□□ -1.52
SKN1YGR143W BDH1P39714 382 aa5.55□□□□□ -1.52
SKN1YGR143W YEL076CP39971 216 aa5.55□□□□□ -1.52
SKN1YGR143W FMP52P40008 231 aa5.55□□□□□ -1.52
SKN1YGR143W LTP1P40347 161 aa5.55□□□□□ -1.52
SKN1YGR143W PRK1P40494 810 aa5.55□□□□□ -1.52
SKN1YGR143W HXT8P40886 569 aa5.55□□□□□ -1.52
SKN1YGR143W BST1P43571 1029 aa5.55□□□□□ -1.52
SKN1YGR143W AIM23P47015 356 aa5.55□□□□□ -1.52
SKN1YGR143W MNN10P50108 393 aaKnown RBP5.55□□□□□ -1.52
SKN1YGR143W YGL159WP53110 370 aa5.55□□□□□ -1.52
SKN1YGR143W MRH4P53166 561 aa5.55□□□□□ -1.52
SKN1YGR143W YGR035CP53222 116 aa5.55□□□□□ -1.52
SKN1YGR143W DYN2Q02647 92 aa5.55□□□□□ -1.52
SKN1YGR143W YPL113CQ02961 396 aa5.55□□□□□ -1.52
SKN1YGR143W GMC1Q04399 608 aa5.55□□□□□ -1.52
SKN1YGR143W GAS2Q06135 555 aa5.55□□□□□ -1.52
SKN1YGR143W CRT10Q08226 957 aa5.55□□□□□ -1.52
SKN1YGR143W PFK27Q12471 397 aaPredicted RBP5.55□□□□□ -1.52
SKN1YGR143W PRM4Q12498 284 aa5.55□□□□□ -1.52
SKN1YGR143W CDC9P04819 755 aa5.54□□□□□ -1.52
SKN1YGR143W YER152CP10356 443 aa5.54□□□□□ -1.52
SKN1YGR143W RPP1BP10622 106 aaKnown RBP5.54□□□□□ -1.52
SKN1YGR143W CSM1P25651 190 aa5.54□□□□□ -1.52
SKN1YGR143W HOG1P32485 435 aa5.54□□□□□ -1.52
SKN1YGR143W VRG4P40107 337 aa5.54□□□□□ -1.52
SKN1YGR143W FLC3P53121 802 aa5.54□□□□□ -1.52
SKN1YGR143W PEX31P53203 462 aa5.54□□□□□ -1.52
SKN1YGR143W UTP6Q02354 440 aaKnown RBP5.54□□□□□ -1.52
SKN1YGR143W SHH3Q04487 196 aa5.54□□□□□ -1.52
SKN1YGR143W YML096WQ04489 525 aa5.54□□□□□ -1.52
SKN1YGR143W YML083CQ04526 418 aa5.54□□□□□ -1.52
SKN1YGR143W NUT2Q06213 157 aa5.54□□□□□ -1.52
SKN1YGR143W PML1Q07930 204 aaPredicted RBP5.54□□□□□ -1.52
SKN1YGR143W BUD20Q08004 166 aaPredicted RBP5.54□□□□□ -1.52
SKN1YGR143W AAC1P04710 309 aa5.54□□□□□ -1.52
SKN1YGR143W HAP4P14064 554 aa5.54□□□□□ -1.52
SKN1YGR143W APE1P14904 514 aa5.54□□□□□ -1.52
SKN1YGR143W SRB6P32570 121 aa5.54□□□□□ -1.52
SKN1YGR143W FAA2P39518 744 aa5.54□□□□□ -1.52
SKN1YGR143W GDI1P39958 451 aaKnown RBP5.54□□□□□ -1.52
SKN1YGR143W PAN6P40459 309 aa5.54□□□□□ -1.52
SKN1YGR143W GLC8P41818 229 aa5.54□□□□□ -1.52
SKN1YGR143W PRM10P42946 383 aa5.54□□□□□ -1.52
SKN1YGR143W AVT1P47082 602 aa5.54□□□□□ -1.52
SKN1YGR143W YJR011CP47086 261 aaPredicted RBP5.54□□□□□ -1.52
SKN1YGR143W AAT1Q01802 451 aa5.54□□□□□ -1.52
SKN1YGR143W NUP49Q02199 472 aa5.54□□□□□ -1.52
SKN1YGR143W EKI1Q03764 534 aa5.54□□□□□ -1.52
SKN1YGR143W YDR444WQ04093 687 aa5.54□□□□□ -1.52
SKN1YGR143W YET2Q04210 160 aa5.54□□□□□ -1.52
SKN1YGR143W YLR224WQ05947 369 aa5.54□□□□□ -1.52
SKN1YGR143W BSC6Q08280 497 aa5.54□□□□□ -1.52
SKN1YGR143W NMD4Q12129 218 aa5.54□□□□□ -1.52
SKN1YGR143W MSS51P32335 436 aa5.53□□□□□ -1.52
SKN1YGR143W YBR284WP38150 797 aa5.53□□□□□ -1.52
SKN1YGR143W SFB3P38810 929 aa5.53□□□□□ -1.52
SKN1YGR143W YEL020CP39994 560 aa5.53□□□□□ -1.52
SKN1YGR143W EAF5P39995 279 aa5.53□□□□□ -1.52
SKN1YGR143W NTA1P40354 457 aa5.53□□□□□ -1.52
SKN1YGR143W LCB2P40970 561 aa5.53□□□□□ -1.52
SKN1YGR143W LSB3P43603 459 aaKnown RBP5.53□□□□□ -1.52
SKN1YGR143W BUD32P53323 261 aa5.53□□□□□ -1.52
SKN1YGR143W KTR5P53966 522 aaPredicted RBP5.53□□□□□ -1.52
SKN1YGR143W ROD1Q02805 837 aa5.53□□□□□ -1.52
SKN1YGR143W YPL077CQ02831 240 aa5.53□□□□□ -1.52
SKN1YGR143W HOF1Q05080 669 aa5.53□□□□□ -1.52
SKN1YGR143W MRX9Q07349 420 aaKnown RBP5.53□□□□□ -1.52
SKN1YGR143W AIM6Q07716 390 aa5.53□□□□□ -1.52
SKN1YGR143W RPL31AP0C2H8 113 aaKnown RBP5.53□□□□□ -1.52
SKN1YGR143W RPL31BP0C2H9 113 aaKnown RBP5.53□□□□□ -1.52
SKN1YGR143W CKA1P15790 372 aa5.53□□□□□ -1.52
SKN1YGR143W SNF6P18888 332 aa5.53□□□□□ -1.52
SKN1YGR143W RPL24BP24000 155 aaKnown RBP5.53□□□□□ -1.52
SKN1YGR143W SPR1P32603 445 aa5.53□□□□□ -1.52
SKN1YGR143W YPT53P36019 220 aa5.53□□□□□ -1.52
SKN1YGR143W GMH1P36125 273 aa5.53□□□□□ -1.52
SKN1YGR143W GPX2P38143 162 aa5.53□□□□□ -1.52
SKN1YGR143W ZTA1P38230 334 aaKnown RBP5.53□□□□□ -1.52
SKN1YGR143W IKI1P38874 309 aa5.53□□□□□ -1.52
SKN1YGR143W BUR6P40096 142 aa5.53□□□□□ -1.52
SKN1YGR143W ELO3P40319 345 aa5.53□□□□□ -1.52
SKN1YGR143W YGR066CP53242 292 aa5.53□□□□□ -1.52
SKN1YGR143W YGR079WP53249 370 aa5.53□□□□□ -1.52
SKN1YGR143W CPR8P53728 308 aa5.53□□□□□ -1.52
SKN1YGR143W CUS2P53830 285 aaPredicted RBP5.53□□□□□ -1.52
SKN1YGR143W TIM10P87108 93 aa5.53□□□□□ -1.52
SKN1YGR143W STD1Q02794 444 aa5.53□□□□□ -1.52
SKN1YGR143W COX6P00427 148 aa5.52□□□□□ -1.53
SKN1YGR143W TPK3P05986 398 aa5.52□□□□□ -1.53
SKN1YGR143W SEC53P07283 254 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W MSF1P08425 469 aa5.52□□□□□ -1.53
SKN1YGR143W EXG1P23776 448 aaKnown RBP5.52□□□□□ -1.53
SKN1YGR143W PRE4P30657 266 aa5.52□□□□□ -1.53
SKN1YGR143W AAR2P32357 355 aaPredicted RBP5.52□□□□□ -1.53
Retrieved 100 of 5,963 RNA–protein pairs in 48.7 ms