RNA–Protein interactions for RNA: YGL098W

USE1, Transcript of Essential SNARE protein localized to the ER, yeastyeast

Gene USE1, Length 738 nt, Biotype protein coding, Subcellular localisation Cell cortex, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
USE1YGL098W TY1A-DR6P0CX70 440 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-ER1P0CX71 440 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-LR2P0CX72 440 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-PLP0CX73 440 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-JR1P0CX74 440 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-LR3P0CX75 440 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-ML2P0CX76 440 aa3.08□□□□□ -1.92
USE1YGL098W YER152CP10356 443 aa3.08□□□□□ -1.92
USE1YGL098W CAF20P12962 161 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W PUT4P15380 627 aa3.08□□□□□ -1.92
USE1YGL098W CKA1P15790 372 aa3.08□□□□□ -1.92
USE1YGL098W RNA14P25298 677 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W YCR090CP25654 182 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W PRP45P28004 379 aaPredicted RBP3.08□□□□□ -1.92
USE1YGL098W PRO3P32263 286 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W GSP1P32835 219 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W GSP2P32836 220 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W RMA1P36001 430 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W FRE2P36033 711 aa3.08□□□□□ -1.92
USE1YGL098W BET3P36149 193 aa3.08□□□□□ -1.92
USE1YGL098W RIB1P38066 345 aa3.08□□□□□ -1.92
USE1YGL098W HMT1P38074 348 aa3.08□□□□□ -1.92
USE1YGL098W SRO77P38163 1010 aa3.08□□□□□ -1.92
USE1YGL098W ATG8P38182 117 aaRIP-Chip data3.08□□□□□ -1.92not detected
USE1YGL098W POP8P38208 133 aa3.08□□□□□ -1.92
USE1YGL098W RTC2P38279 296 aa3.08□□□□□ -1.92
USE1YGL098W SSH1P38353 490 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W MDM31P38880 579 aa3.08□□□□□ -1.92
USE1YGL098W PHO90P39535 881 aa3.08□□□□□ -1.92
USE1YGL098W COG3P40094 801 aa3.08□□□□□ -1.92
USE1YGL098W SLZ1P40167 298 aa3.08□□□□□ -1.92
USE1YGL098W PAN6P40459 309 aa3.08□□□□□ -1.92
USE1YGL098W FMC1P40491 155 aa3.08□□□□□ -1.92
USE1YGL098W ZIM17P42844 174 aa3.08□□□□□ -1.92
USE1YGL098W ALY2P47029 1046 aa3.08□□□□□ -1.92
USE1YGL098W NET1P47035 1189 aa3.08□□□□□ -1.92
USE1YGL098W JHD2P47156 728 aaPredicted RBP3.08□□□□□ -1.92
USE1YGL098W HXT16P47185 567 aa3.08□□□□□ -1.92
USE1YGL098W PHO23P50947 330 aa3.08□□□□□ -1.92
USE1YGL098W AIF1P52923 378 aa3.08□□□□□ -1.92
USE1YGL098W COS10P52924 374 aa3.08□□□□□ -1.92
USE1YGL098W NSA1P53136 463 aaPredicted RBP3.08□□□□□ -1.92
USE1YGL098W LSB1P53281 241 aa3.08□□□□□ -1.92
USE1YGL098W GTR2P53290 341 aa3.08□□□□□ -1.92
USE1YGL098W ERV29P53337 310 aa3.08□□□□□ -1.92
USE1YGL098W YNL181WP53878 407 aa3.08□□□□□ -1.92
USE1YGL098W MTQ1P53944 314 aa3.08□□□□□ -1.92
USE1YGL098W ASI3P53983 676 aa3.08□□□□□ -1.92
USE1YGL098W ARG5,6Q01217 863 aa3.08□□□□□ -1.92
USE1YGL098W YDR131CQ03899 556 aa3.08□□□□□ -1.92
USE1YGL098W CUE4Q04201 117 aaPredicted RBP3.08□□□□□ -1.92
USE1YGL098W ANT1Q06497 328 aa3.08□□□□□ -1.92
USE1YGL098W ESC8Q08119 714 aa3.08□□□□□ -1.92
USE1YGL098W YOL019WQ08157 551 aa3.08□□□□□ -1.92
USE1YGL098W YOR059CQ08448 450 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W CSM4Q08955 156 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-GR1Q12085 440 aa3.08□□□□□ -1.92
USE1YGL098W REC8Q12188 680 aa3.08□□□□□ -1.92
USE1YGL098W RGT2Q12300 763 aa3.08□□□□□ -1.92
USE1YGL098W YOP1Q12402 180 aa3.08□□□□□ -1.92
USE1YGL098W YDL199CQ12407 687 aa3.08□□□□□ -1.92
USE1YGL098W PSF1Q12488 208 aa3.08□□□□□ -1.92
USE1YGL098W MHT1Q12525 324 aa3.08□□□□□ -1.92
USE1YGL098W YMR030W-AQ3E760 96 aa3.08□□□□□ -1.92
USE1YGL098W TY1A-PR3Q6Q5H1 440 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W TY1A-OLQ92392 440 aaKnown RBP3.08□□□□□ -1.92
USE1YGL098W TAD3Q9URQ3 322 aa3.08□□□□□ -1.92
USE1YGL098W BI3Q9ZZW7 517 aa3.08□□□□□ -1.92
USE1YGL098W PRC1P00729 532 aa3.07□□□□□ -1.92
USE1YGL098W ADH3P07246 375 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W HTS1P07263 546 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W SRD1P09007 221 aa3.07□□□□□ -1.92
USE1YGL098W FBP1P09201 348 aa3.07□□□□□ -1.92
USE1YGL098W NHP6BP11633 99 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W HAP3P13434 144 aa3.07□□□□□ -1.92
USE1YGL098W ART10P18634 518 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W RNR1P21524 888 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W SEC62P21825 274 aa3.07□□□□□ -1.92
USE1YGL098W MIR1P23641 311 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W CPR4P25334 318 aa3.07□□□□□ -1.92
USE1YGL098W EMC1P25574 760 aa3.07□□□□□ -1.92
USE1YGL098W PEX34P25584 144 aa3.07□□□□□ -1.92
USE1YGL098W YCL068CP25593 260 aa3.07□□□□□ -1.92
USE1YGL098W YCR102CP25608 368 aa3.07□□□□□ -1.92
USE1YGL098W YCR061WP25639 631 aa3.07□□□□□ -1.92
USE1YGL098W EHD3P28817 500 aa3.07□□□□□ -1.92
USE1YGL098W CAT2P32796 670 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W YPT7P32939 208 aa3.07□□□□□ -1.92
USE1YGL098W PIN4P34217 668 aaKnown RBP RIP-Chip data3.07□□□□□ -1.92not detected
USE1YGL098W MOT2P34909 587 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W TMA19P35691 167 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W PTK1P36002 662 aaPredicted RBP3.07□□□□□ -1.92
USE1YGL098W SRY1P36007 326 aa3.07□□□□□ -1.92
USE1YGL098W MGE1P38523 228 aa3.07□□□□□ -1.92
USE1YGL098W YPT31P38555 223 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W LRP1P38801 184 aaKnown RBP3.07□□□□□ -1.92
USE1YGL098W UBA4P38820 440 aa3.07□□□□□ -1.92
USE1YGL098W PNT1P38969 423 aa3.07□□□□□ -1.92
USE1YGL098W FET3P38993 636 aa3.07□□□□□ -1.92
USE1YGL098W GDI1P39958 451 aaKnown RBP3.07□□□□□ -1.92
Retrieved 100 of 5,963 RNA–protein pairs in 46.2 ms