RNA–Protein interactions for RNA: YDR334W

SWR1, Transcript of Swi2/Snf2-related ATPase, yeastyeast

Gene SWR1, Length 4,545 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SWR1YDR334W YPT10P38146 199 aa2.32□□□□□ -2.04
SWR1YDR334W ZTA1P38230 334 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W BMT2P38278 337 aa2.32□□□□□ -2.04
SWR1YDR334W COS111P38308 924 aa2.32□□□□□ -2.04
SWR1YDR334W SHG1P38337 142 aa2.32□□□□□ -2.04
SWR1YDR334W MSS2P40990 351 aa2.32□□□□□ -2.04
SWR1YDR334W YJL055WP47044 245 aa2.32□□□□□ -2.04
SWR1YDR334W BNA1P47096 177 aa2.32□□□□□ -2.04
SWR1YDR334W INN1P53901 409 aa2.32□□□□□ -2.04
SWR1YDR334W LGE1Q02796 332 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W MYO5Q04439 1219 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W YDR222WQ04925 415 aa2.32□□□□□ -2.04
SWR1YDR334W DIC1Q06143 298 aa2.32□□□□□ -2.04
SWR1YDR334W SWA2Q06677 668 aa2.32□□□□□ -2.04
SWR1YDR334W VAC14Q06708 880 aa2.32□□□□□ -2.04
SWR1YDR334W RAX1Q08760 435 aa2.32□□□□□ -2.04
SWR1YDR334W DDC1Q08949 612 aa2.32□□□□□ -2.04
SWR1YDR334W YLR053CQ12026 108 aa2.32□□□□□ -2.04
SWR1YDR334W MHT1Q12525 324 aa2.32□□□□□ -2.04
SWR1YDR334W CHS1P08004 1131 aa2.32□□□□□ -2.04
SWR1YDR334W MET2P08465 486 aa2.32□□□□□ -2.04
SWR1YDR334W CSM1P25651 190 aa2.32□□□□□ -2.04
SWR1YDR334W CDC50P25656 391 aa2.32□□□□□ -2.04
SWR1YDR334W DPH2P32461 534 aa2.32□□□□□ -2.04
SWR1YDR334W TFB1P32776 642 aa2.32□□□□□ -2.04
SWR1YDR334W PCH2P38126 564 aa2.32□□□□□ -2.04
SWR1YDR334W NTC20P38302 140 aaPredicted RBP2.32□□□□□ -2.04
SWR1YDR334W GRE3P38715 327 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SWR1YDR334W YHR035WP38769 630 aa2.32□□□□□ -2.04
SWR1YDR334W HRB1P38922 454 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SWR1YDR334W JLP2P40206 208 aa2.32□□□□□ -2.04
SWR1YDR334W YFR018CP43599 363 aa2.32□□□□□ -2.04
SWR1YDR334W TRM9P49957 279 aa2.32□□□□□ -2.04
SWR1YDR334W COS12P53053 380 aa2.32□□□□□ -2.04
SWR1YDR334W YGR039WP53225 103 aa2.32□□□□□ -2.04
SWR1YDR334W CAB4P53332 305 aa2.32□□□□□ -2.04
SWR1YDR334W YPR003CP53394 754 aa2.32□□□□□ -2.04
SWR1YDR334W VPS28Q02767 242 aa2.32□□□□□ -2.04
SWR1YDR334W NGL2Q03264 515 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W ARP10Q04549 284 aa2.32□□□□□ -2.04
SWR1YDR334W YDR124WQ04608 324 aa2.32□□□□□ -2.04
SWR1YDR334W MCH1Q07376 486 aa2.32□□□□□ -2.04
SWR1YDR334W ATG34Q12292 412 aa2.32□□□□□ -2.04
SWR1YDR334W RAD52P06778 471 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W SPS2P08459 502 aa2.32□□□□□ -2.04
SWR1YDR334W DSF1P0CX08 502 aa2.32□□□□□ -2.04
SWR1YDR334W YNR073CP0CX09 502 aa2.32□□□□□ -2.04
SWR1YDR334W PCK1P10963 549 aa2.32□□□□□ -2.04
SWR1YDR334W YPK1P12688 680 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W POT1P27796 417 aaKnown RBP RIP-Chip data2.32□□□□□ -2.04not detected
SWR1YDR334W YIM1P28625 365 aa2.32□□□□□ -2.04
SWR1YDR334W ASF2P32448 525 aaPredicted RBP2.32□□□□□ -2.04
SWR1YDR334W ERG1P32476 496 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W MRPL24P36525 258 aaPredicted RBP2.32□□□□□ -2.04
SWR1YDR334W IML3P38265 245 aa2.32□□□□□ -2.04
SWR1YDR334W RRT2P38332 387 aa2.32□□□□□ -2.04
SWR1YDR334W TRM5P38793 499 aa2.32□□□□□ -2.04
SWR1YDR334W PCL5P38794 229 aa2.32□□□□□ -2.04
SWR1YDR334W AST2P39945 430 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W YJL016WP47072 561 aa2.32□□□□□ -2.04
SWR1YDR334W SOL1P50278 321 aa2.32□□□□□ -2.04
SWR1YDR334W ERV14P53173 138 aa2.32□□□□□ -2.04
SWR1YDR334W YPL113CQ02961 396 aa2.32□□□□□ -2.04
SWR1YDR334W PKR1Q03880 122 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W BCH1Q05029 724 aa2.32□□□□□ -2.04
SWR1YDR334W FUS2Q05670 677 aa2.32□□□□□ -2.04
SWR1YDR334W TMA10Q06177 86 aa2.32□□□□□ -2.04
SWR1YDR334W YLR049CQ12110 428 aa2.32□□□□□ -2.04
SWR1YDR334W RPL35AP0CX84 120 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W RPL35BP0CX85 120 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W RNR3P21672 869 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W MRS4P23500 304 aa2.32□□□□□ -2.04
SWR1YDR334W RPN12P32496 274 aa2.32□□□□□ -2.04
SWR1YDR334W SKN1P33336 771 aa2.32□□□□□ -2.04
SWR1YDR334W PMT1P33775 817 aa2.32□□□□□ -2.04
SWR1YDR334W MRPL7P36519 292 aa2.32□□□□□ -2.04
SWR1YDR334W MRPS9P38120 278 aa2.32□□□□□ -2.04
SWR1YDR334W ERG7P38604 731 aa2.32□□□□□ -2.04
SWR1YDR334W MUP3P38734 546 aa2.32□□□□□ -2.04
SWR1YDR334W YER010CP40011 234 aa2.32□□□□□ -2.04
SWR1YDR334W TDA10P42938 290 aa2.32□□□□□ -2.04
SWR1YDR334W LSM8P47093 109 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W HCH1P53834 153 aa2.32□□□□□ -2.04
SWR1YDR334W PNG1Q02890 363 aa2.32□□□□□ -2.04
SWR1YDR334W GOT1Q03554 138 aa2.32□□□□□ -2.04
SWR1YDR334W YMR018WQ04364 514 aa2.32□□□□□ -2.04
SWR1YDR334W COX20Q04935 205 aa2.32□□□□□ -2.04
SWR1YDR334W DCR2Q05924 578 aa2.32□□□□□ -2.04
SWR1YDR334W ORM2Q06144 216 aa2.32□□□□□ -2.04
SWR1YDR334W PEX30Q06169 523 aa2.32□□□□□ -2.04
SWR1YDR334W PHO92Q06390 306 aa2.32□□□□□ -2.04
SWR1YDR334W BRX1Q08235 291 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W RKI1Q12189 258 aa2.32□□□□□ -2.04
SWR1YDR334W RRP42Q12277 265 aaPredicted RBP2.32□□□□□ -2.04
SWR1YDR334W MED1Q12321 566 aa2.32□□□□□ -2.04
SWR1YDR334W ERG27Q12452 347 aaKnown RBP2.32□□□□□ -2.04
SWR1YDR334W CSR2Q12734 1121 aa2.32□□□□□ -2.04
SWR1YDR334W RPL27AP0C2H6 136 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W RPL27BP0C2H7 136 aaKnown RBP2.31□□□□□ -2.04
SWR1YDR334W YGL041W-AP0C5N3 154 aa2.31□□□□□ -2.04
Retrieved 100 of 5,963 RNA–protein pairs in 92.2 ms