RNA–Protein interactions for RNA: YDR073W

SNF11, Transcript of Subunit of the SWI/SNF chromatin remodeling complex, yeast

Gene SNF11, Length 510 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SNF11	YDR073W	YER190C-B	P0CX94	160 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	YEL077W-A	P0CX95	160 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	YGR296C-B	P0CX96	160 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	YPL283W-B	P0CX97	160 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	YPR204C-A	P0CX98	160 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	DAL82	P21705	255 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	RRT12	P25381	491 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	RAD51	P25454	400 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	MUD1	P32605	298 aa	Known RBP	5.03	□□□□□ -1.6
SNF11	YDR073W	DTR1	P38125	572 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	MDV1	P47025	714 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	PAM18	Q07914	168 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	ALE1	Q08548	619 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	YOR029W	Q12243	111 aa		5.03	□□□□□ -1.6
SNF11	YDR073W	MRP1	P10662	321 aa	Known RBP	5.02	□□□□□ -1.61
SNF11	YDR073W	MTF1	P14908	341 aa	Known RBP	5.02	□□□□□ -1.61
SNF11	YDR073W	NDC1	P32500	655 aa		5.02	□□□□□ -1.61
SNF11	YDR073W	COX14	P39103	70 aa		5.02	□□□□□ -1.61
SNF11	YDR073W	DIM1	P41819	318 aa	Known RBP	5.02	□□□□□ -1.61
SNF11	YDR073W	YGR210C	P42942	411 aa		5.02	□□□□□ -1.61
SNF11	YDR073W	CDC36	P06100	191 aa	Predicted RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	MET16	P18408	261 aa	Predicted RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	MEI5	P32489	222 aa		5.01	□□□□□ -1.61
SNF11	YDR073W	KAR9	P32526	644 aa		5.01	□□□□□ -1.61
SNF11	YDR073W	RAD5	P32849	1169 aa	Predicted RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	BIG1	P38813	335 aa		5.01	□□□□□ -1.61
SNF11	YDR073W	YIL169C	P40442	995 aa		5.01	□□□□□ -1.61
SNF11	YDR073W	OST1	P41543	476 aa	Known RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	PSA1	P41940	361 aa	Known RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	YCH1	P42937	148 aa		5.01	□□□□□ -1.61
SNF11	YDR073W	MYO5	Q04439	1219 aa	Known RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	YLR283W	Q05867	314 aa		5.01	□□□□□ -1.61
SNF11	YDR073W	CLP1	Q08685	445 aa	Predicted RBP	5.01	□□□□□ -1.61
SNF11	YDR073W	TDH2	P00358	332 aa	Known RBP	5	□□□□□ -1.61
SNF11	YDR073W	ATP6	P00854	259 aa		5	□□□□□ -1.61
SNF11	YDR073W	ILV1	P00927	576 aa	Known RBP	5	□□□□□ -1.61
SNF11	YDR073W	MTC6	P38849	526 aa		5	□□□□□ -1.61
SNF11	YDR073W	JLP2	P40206	208 aa		5	□□□□□ -1.61
SNF11	YDR073W	COA1	P40452	197 aa		5	□□□□□ -1.61
SNF11	YDR073W	SLM1	P40485	686 aa		5	□□□□□ -1.61
SNF11	YDR073W	DFG10	P40526	253 aa		5	□□□□□ -1.61
SNF11	YDR073W	YNL320W	P42840	284 aa		5	□□□□□ -1.61
SNF11	YDR073W	HCH1	P53834	153 aa		5	□□□□□ -1.61
SNF11	YDR073W	ALG11	P53954	548 aa	Known RBP	5	□□□□□ -1.61
SNF11	YDR073W	YMR010W	Q03687	405 aa		5	□□□□□ -1.61
SNF11	YDR073W	BNA7	Q04066	261 aa		5	□□□□□ -1.61
SNF11	YDR073W	MDM36	Q06820	579 aa		5	□□□□□ -1.61
SNF11	YDR073W	ASR1	Q06834	288 aa		5	□□□□□ -1.61
SNF11	YDR073W	RGT2	Q12300	763 aa		5	□□□□□ -1.61
SNF11	YDR073W	PCL9	Q12477	304 aa		5	□□□□□ -1.61
SNF11	YDR073W	YCR024C-B	Q3E7Z8	88 aa		5	□□□□□ -1.61
SNF11	YDR073W	YOS9	Q99220	542 aa		5	□□□□□ -1.61
SNF11	YDR073W	IZH4	Q99393	312 aa		5	□□□□□ -1.61
SNF11	YDR073W	ZIP1	P31111	875 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	PMU1	P36069	295 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	PRS4	P38063	326 aa	Predicted RBP	4.99	□□□□□ -1.61
SNF11	YDR073W	YHR035W	P38769	630 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	TES1	P41903	349 aa	Known RBP	4.99	□□□□□ -1.61
SNF11	YDR073W	RTT101	P47050	842 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	IBD2	P53892	351 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	YPL077C	Q02831	240 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	MRPS17	Q03246	237 aa	Predicted RBP	4.99	□□□□□ -1.61
SNF11	YDR073W	PRM6	Q04705	352 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	SDO1	Q07953	250 aa	Known RBP	4.99	□□□□□ -1.61
SNF11	YDR073W	DSE3	Q08729	430 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	POM33	Q12164	279 aa		4.99	□□□□□ -1.61
SNF11	YDR073W	HTZ1	Q12692	134 aa	Known RBP	4.99	□□□□□ -1.61
SNF11	YDR073W	RPL20A	P0CX23	172 aa	Known RBP	4.98	□□□□□ -1.61
SNF11	YDR073W	RPL20B	P0CX24	172 aa	Predicted RBP	4.98	□□□□□ -1.61
SNF11	YDR073W	MATALPHA1	P0CY06	175 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	HMLALPHA1	P0CY07	175 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	ATR1	P13090	542 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	PHA2	P32452	334 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	MGM101	P32787	269 aa	Known RBP	4.98	□□□□□ -1.61
SNF11	YDR073W	NAT2	P37293	288 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	MIX23	P38162	196 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	SMF2	P38778	549 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	YIA6	P40556	373 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	LSG1	P53145	640 aa	Known RBP	4.98	□□□□□ -1.61
SNF11	YDR073W	COS1	P53822	381 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	RPM2	Q02773	1202 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	LOT6	Q07923	191 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	EAF3	Q12432	401 aa		4.98	□□□□□ -1.61
SNF11	YDR073W	HIS1	P00498	297 aa	Known RBP	4.97	□□□□□ -1.61
SNF11	YDR073W	PIS1	P06197	220 aa	Known RBP	4.97	□□□□□ -1.61
SNF11	YDR073W	YCP4	P25349	247 aa	Known RBP	4.97	□□□□□ -1.61
SNF11	YDR073W	PPA2	P28239	310 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	YKL063C	P35725	167 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	AIM29	P36154	155 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	MAL32	P38158	584 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	ECM8	P38246	354 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	MTC4	P38335	694 aa	Known RBP	4.97	□□□□□ -1.61
SNF11	YDR073W	YER034W	P40022	185 aa	Known RBP	4.97	□□□□□ -1.61
SNF11	YDR073W	XBP1	P40489	647 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	YIL029C	P40538	142 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	HIT1	P46973	164 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	RAD17	P48581	401 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	MAL12	P53341	584 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	GOR1	P53839	350 aa		4.97	□□□□□ -1.61
SNF11	YDR073W	KTR6	P54070	446 aa		4.97	□□□□□ -1.61

Retrieved 100 of 5,963 RNA–protein pairs in 22.4 ms