RNA–Protein interactions for RNA: YDL229W

SSB1, Transcript of Cytoplasmic ATPase that is a ribosome-associated molecular chaperone, yeast

Gene SSB1, Length 1,842 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (RIP-Chip)
Gene	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	Detected Interaction
SSB1	YDL229W	RDL1	Q12305	139 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	RTN2	Q12443	393 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	AIM45	Q12480	344 aa	Known RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	DCP1	Q12517	231 aa	Predicted RBP	4.1	□□□□□ -1.75
SSB1	YDL229W	TY4B-H	P0C2J7	1802 aa		4.1	□□□□□ -1.75
SSB1	YDL229W	GAL80	P04387	435 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	ASP3-2	P0CX77	362 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	ASP3-3	P0CX78	362 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	ASP3-4	P0CX79	362 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	ASP3-1	P0CZ17	362 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	CPR1	P14832	162 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	ELO2	P25358	347 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	PBN1	P25580	416 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	STP22	P25604	385 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	CAP1	P28495	268 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	AEP1	P32493	518 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	RML2	P32611	393 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	YKU70	P32807	602 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	RPT3	P33298	428 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	YPT53	P36019	220 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	FRE2	P36033	711 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	GEX2	P36173	615 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	SHM2	P37291	469 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	YBR056W	P38081	501 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	CST26	P38226	397 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	REG2	P38232	338 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	RCK1	P38622	512 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	WSC4	P38739	605 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	SET5	P38890	526 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	ERG28	P40030	148 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	RRD1	P40454	393 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	GPI14	P47088	403 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	TYW3	P53177	273 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	YGR122W	P53272	402 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	APM1	Q00776	475 aa	Predicted RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	RIF2	Q06208	395 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	ASA1	Q06822	443 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	GAS5	Q08193	484 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	YOR342C	Q12182	319 aa		4.09	□□□□□ -1.75
SSB1	YDL229W	MEX67	Q99257	599 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	URB1	P34241	1764 aa	Known RBP	4.09	□□□□□ -1.75
SSB1	YDL229W	BCY1	P07278	416 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPL27A	P0C2H6	136 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPL27B	P0C2H7	136 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPL31A	P0C2H8	113 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPL31B	P0C2H9	113 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPL1A	P0CX43	217 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPL1B	P0CX44	217 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	EXO70	P19658	623 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	MAG1	P22134	296 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RPS1B	P23248	255 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	YCK2	P23292	546 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	NAR1	P23503	491 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	HEM12	P32347	362 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	RNP1	P32385	249 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	MDH3	P32419	343 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
SSB1	YDL229W	NAB2	P32505	525 aa	Known RBP RIP-Chip data	4.09	□□□□□ -1.76	not detected
SSB1	YDL229W	ISC10	P32645	267 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	NGR1	P32831	672 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	TIP20	P33891	701 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YET1	P35723	206 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	COS9	P36034	407 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	LDH1	P38139	375 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	BNA4	P38169	460 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	LAG1	P38703	411 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YEL020C	P39994	560 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	MIT1	P40002	666 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	SHO1	P40073	367 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	PGD1	P40356	397 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	CDC40	P40968	455 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	YCH1	P42937	148 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	QRI7	P43122	407 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	AIM23	P47015	356 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YJR011C	P47086	261 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	HOC1	P47124	396 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YJR149W	P47177	404 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	PHB2	P50085	310 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	SBH2	P52871	88 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YGL185C	P53100	379 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	SOK2	P53438	785 aa	Predicted RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	MRPL22	P53881	309 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	SKO1	Q02100	647 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YMR253C	Q04835	414 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	DPP1	Q05521	289 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	MRPL35	Q06678	367 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	PUN1	Q06991	263 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	AIM6	Q07716	390 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	PAM18	Q07914	168 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	AFT2	Q08957	416 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	SAM4	Q08985	325 aa	Known RBP	4.09	□□□□□ -1.76
SSB1	YDL229W	GPM2	Q12008	311 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	SRL2	Q12020	392 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	TMS1	Q12116	473 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YLR046C	Q12253	270 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	YCL012C	Q8J0M4	134 aa		4.09	□□□□□ -1.76
SSB1	YDL229W	RHO1	P06780	209 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	CDC33	P07260	213 aa	Known RBP	4.08	□□□□□ -1.76
SSB1	YDL229W	CDC6	P09119	513 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	YER152C	P10356	443 aa		4.08	□□□□□ -1.76
SSB1	YDL229W	FUN14	P18411	198 aa		4.08	□□□□□ -1.76

Retrieved 100 of 5,963 RNA–protein pairs in 55 ms