RNA–Protein interactions for RNA: YCR028C-A

RIM1, Transcript of ssDNA-binding protein essential for mitochondrial genome maintenance, yeastyeast

Gene RIM1, Length 408 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
RIM1YCR028C-A YMR130WQ04223 302 aa2.88□□□□□ -1.95
RIM1YCR028C-A YDR278CQ05612 105 aa2.88□□□□□ -1.95
RIM1YCR028C-A SGT2Q12118 346 aaKnown RBP2.88□□□□□ -1.95
RIM1YCR028C-A GET4Q12125 312 aa2.88□□□□□ -1.95
RIM1YCR028C-A YRM1Q12340 786 aa2.88□□□□□ -1.95
RIM1YCR028C-A GIS3Q12418 502 aa2.88□□□□□ -1.95
RIM1YCR028C-A NOT5Q12514 560 aaPredicted RBP2.88□□□□□ -1.95
RIM1YCR028C-A AI5_BETAQ9ZZX0 354 aa2.88□□□□□ -1.95
RIM1YCR028C-A CYC3P06182 269 aa2.87□□□□□ -1.95
RIM1YCR028C-A PDX1P16451 410 aa2.87□□□□□ -1.95
RIM1YCR028C-A TRX1P22217 103 aaKnown RBP2.87□□□□□ -1.95
RIM1YCR028C-A DPB2P24482 689 aaPredicted RBP2.87□□□□□ -1.95
RIM1YCR028C-A RPS5P26783 225 aaKnown RBP2.87□□□□□ -1.95
RIM1YCR028C-A TFC1P32367 649 aa2.87□□□□□ -1.95
RIM1YCR028C-A KAR9P32526 644 aa2.87□□□□□ -1.95
RIM1YCR028C-A TFB1P32776 642 aa2.87□□□□□ -1.95
RIM1YCR028C-A SKG6P32900 734 aaPredicted RBP2.87□□□□□ -1.95
RIM1YCR028C-A PEX5P35056 612 aa2.87□□□□□ -1.95
RIM1YCR028C-A RRN10P38204 145 aa2.87□□□□□ -1.95
RIM1YCR028C-A PHO88P38264 188 aaPredicted RBP2.87□□□□□ -1.95
RIM1YCR028C-A PCF11P39081 626 aaPredicted RBP2.87□□□□□ -1.95
RIM1YCR028C-A YAL037WP39728 267 aa2.87□□□□□ -1.95
RIM1YCR028C-A HMF1P40037 129 aaKnown RBP2.87□□□□□ -1.95
RIM1YCR028C-A SNZ3P43545 298 aa2.87□□□□□ -1.95
RIM1YCR028C-A TRF5P48561 642 aaKnown RBP2.87□□□□□ -1.95
RIM1YCR028C-A SNZ2P53824 298 aa2.87□□□□□ -1.95
RIM1YCR028C-A GPI15P53961 229 aa2.87□□□□□ -1.95
RIM1YCR028C-A SLT2Q00772 484 aa2.87□□□□□ -1.95
RIM1YCR028C-A OSH6Q02201 448 aa2.87□□□□□ -1.95
RIM1YCR028C-A OAZ1Q02803 292 aa2.87□□□□□ -1.95
RIM1YCR028C-A TAF12Q03761 539 aa2.87□□□□□ -1.95
RIM1YCR028C-A YDR131CQ03899 556 aa2.87□□□□□ -1.95
RIM1YCR028C-A YMR226CQ05016 267 aaKnown RBP2.87□□□□□ -1.95
RIM1YCR028C-A KAP95Q06142 861 aaKnown RBP2.87□□□□□ -1.95
RIM1YCR028C-A YET3Q07451 203 aa2.87□□□□□ -1.95
RIM1YCR028C-A NSE1Q07913 336 aa2.87□□□□□ -1.95
RIM1YCR028C-A YPR202WQ08993 238 aa2.87□□□□□ -1.95
RIM1YCR028C-A RIM15P43565 1770 aa2.87□□□□□ -1.95
RIM1YCR028C-A RAD10P06838 210 aa2.86□□□□□ -1.95
RIM1YCR028C-A IMA3P0CW40 589 aa2.86□□□□□ -1.95
RIM1YCR028C-A IMA4P0CW41 589 aa2.86□□□□□ -1.95
RIM1YCR028C-A CDC42P19073 191 aa2.86□□□□□ -1.95
RIM1YCR028C-A RRT12P25381 491 aa2.86□□□□□ -1.95
RIM1YCR028C-A ICL1P28240 557 aaPredicted RBP2.86□□□□□ -1.95
RIM1YCR028C-A MEI4P29467 408 aa2.86□□□□□ -1.95
RIM1YCR028C-A URA10P30402 227 aa2.86□□□□□ -1.95
RIM1YCR028C-A ATP7P30902 174 aa2.86□□□□□ -1.95
RIM1YCR028C-A SPR1P32603 445 aa2.86□□□□□ -1.95
RIM1YCR028C-A NUF2P33895 451 aa2.86□□□□□ -1.95
RIM1YCR028C-A SLM4P38247 162 aa2.86□□□□□ -1.95
RIM1YCR028C-A SWC5P38326 303 aa2.86□□□□□ -1.95
RIM1YCR028C-A RRP4P38792 359 aaKnown RBP2.86□□□□□ -1.95
RIM1YCR028C-A MAM33P40513 266 aa2.86□□□□□ -1.95
RIM1YCR028C-A SNL1P40548 159 aa2.86□□□□□ -1.95
RIM1YCR028C-A RTT102P53330 157 aa2.86□□□□□ -1.95
RIM1YCR028C-A RHO5P53879 331 aaKnown RBP2.86□□□□□ -1.95
RIM1YCR028C-A YKR005CQ02203 525 aa2.86□□□□□ -1.95
RIM1YCR028C-A TVP15Q03860 143 aa2.86□□□□□ -1.95
RIM1YCR028C-A SPC2Q04969 178 aa2.86□□□□□ -1.95
RIM1YCR028C-A DCS1Q06151 350 aa2.86□□□□□ -1.95
RIM1YCR028C-A NDL1Q06568 189 aa2.86□□□□□ -1.95
RIM1YCR028C-A MHR1Q06630 226 aa2.86□□□□□ -1.95
RIM1YCR028C-A IMA2Q08295 589 aa2.86□□□□□ -1.95
RIM1YCR028C-A AAD15Q08361 143 aa2.86□□□□□ -1.95
RIM1YCR028C-A IES4Q08561 116 aa2.86□□□□□ -1.95
RIM1YCR028C-A VPS54Q12071 889 aa2.86□□□□□ -1.95
RIM1YCR028C-A RBD2Q12270 262 aa2.86□□□□□ -1.95
RIM1YCR028C-A BI3Q9ZZW7 517 aa2.86□□□□□ -1.95
RIM1YCR028C-A KSS1P14681 368 aa2.85□□□□□ -1.95
RIM1YCR028C-A VMA2P16140 517 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A ZIP1P31111 875 aa2.85□□□□□ -1.95
RIM1YCR028C-A RIM1P32445 135 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A RIB7P33312 244 aa2.85□□□□□ -1.95
RIM1YCR028C-A UTP11P34247 250 aaPredicted RBP2.85□□□□□ -1.95
RIM1YCR028C-A TVP38P36164 337 aa2.85□□□□□ -1.95
RIM1YCR028C-A SHC1P39000 512 aa2.85□□□□□ -1.95
RIM1YCR028C-A PEP8P40335 379 aa2.85□□□□□ -1.95
RIM1YCR028C-A FMP32P43557 207 aa2.85□□□□□ -1.95
RIM1YCR028C-A EMC2P47133 292 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A TIS11P47977 285 aa2.85□□□□□ -1.95
RIM1YCR028C-A RBL2P48606 106 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A YLR152CP54072 576 aa2.85□□□□□ -1.95
RIM1YCR028C-A ERB1Q04660 807 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A SPH1Q06160 661 aa2.85□□□□□ -1.95
RIM1YCR028C-A CUE5Q08412 411 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A WTM1Q12363 437 aaKnown RBP2.85□□□□□ -1.95
RIM1YCR028C-A RGS2Q99188 309 aa2.85□□□□□ -1.95
RIM1YCR028C-A FAS2P19097 1887 aaKnown RBP2.84□□□□□ -1.95
RIM1YCR028C-A REP1P03871 373 aa2.84□□□□□ -1.95
RIM1YCR028C-A HOM3P10869 527 aa2.84□□□□□ -1.95
RIM1YCR028C-A GCY1P14065 312 aaKnown RBP RIP-Chip data2.84□□□□□ -1.95not detected
RIM1YCR028C-A PUT4P15380 627 aa2.84□□□□□ -1.95
RIM1YCR028C-A FAR1P21268 830 aa2.84□□□□□ -1.95
RIM1YCR028C-A POP5P28005 173 aa2.84□□□□□ -1.95
RIM1YCR028C-A PHA2P32452 334 aa2.84□□□□□ -1.95
RIM1YCR028C-A DPH2P32461 534 aa2.84□□□□□ -1.95
RIM1YCR028C-A CYM1P32898 989 aa2.84□□□□□ -1.95
RIM1YCR028C-A MCR1P36060 302 aaKnown RBP2.84□□□□□ -1.95
RIM1YCR028C-A DBP7P36120 742 aaKnown RBP2.84□□□□□ -1.95
RIM1YCR028C-A SRL3P36167 246 aa2.84□□□□□ -1.95
Retrieved 100 of 5,963 RNA–protein pairs in 22.9 ms