RNA–Protein interactions for RNA: YBR080C

SEC18, Transcript of AAA ATPase and SNARE disassembly chaperone, yeastyeast

Gene SEC18, Length 2,277 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
SEC18YBR080C ATG34Q12292 412 aa5.27□□□□□ -1.57
SEC18YBR080C SPT6P23615 1451 aaKnown RBP5.27□□□□□ -1.57
SEC18YBR080C TUS1Q06412 1307 aa5.26□□□□□ -1.57
SEC18YBR080C SNF3P10870 884 aa5.26□□□□□ -1.57
SEC18YBR080C NUP1P20676 1076 aa5.26□□□□□ -1.57
SEC18YBR080C UBC8P28263 218 aa5.26□□□□□ -1.57
SEC18YBR080C SSN8P47821 323 aa5.26□□□□□ -1.57
SEC18YBR080C YPL080CQ02826 108 aa5.26□□□□□ -1.57
SEC18YBR080C YDL177CQ12257 170 aa5.26□□□□□ -1.57
SEC18YBR080C RGS2Q99188 309 aa5.26□□□□□ -1.57
SEC18YBR080C AI5_BETAQ9ZZX0 354 aa5.26□□□□□ -1.57
SEC18YBR080C HIS4P00815 799 aaKnown RBP5.26□□□□□ -1.57
SEC18YBR080C URA6P15700 204 aa5.26□□□□□ -1.57
SEC18YBR080C CDC13P32797 924 aaKnown RBP5.26□□□□□ -1.57
SEC18YBR080C YOX1P34161 385 aa5.26□□□□□ -1.57
SEC18YBR080C PRS2P38620 318 aaKnown RBP5.26□□□□□ -1.57
SEC18YBR080C JLP2P40206 208 aa5.26□□□□□ -1.57
SEC18YBR080C SIM1P40472 476 aa5.26□□□□□ -1.57
SEC18YBR080C APM1Q00776 475 aaPredicted RBP5.26□□□□□ -1.57
SEC18YBR080C PEX12Q04370 399 aa5.26□□□□□ -1.57
SEC18YBR080C YMR114CQ04471 368 aaKnown RBP5.26□□□□□ -1.57
SEC18YBR080C PPR1P07272 904 aaPredicted RBP5.25□□□□□ -1.57
SEC18YBR080C KIN3P22209 435 aa5.25□□□□□ -1.57
SEC18YBR080C HAT2P39984 401 aa5.25□□□□□ -1.57
SEC18YBR080C THO1P40040 218 aaKnown RBP5.25□□□□□ -1.57
SEC18YBR080C YJR079WP47126 109 aa5.25□□□□□ -1.57
SEC18YBR080C YJR149WP47177 404 aa5.25□□□□□ -1.57
SEC18YBR080C VMA10P48836 114 aaKnown RBP5.25□□□□□ -1.57
SEC18YBR080C AZR1P50080 613 aa5.25□□□□□ -1.57
SEC18YBR080C TRS23Q03784 219 aa5.25□□□□□ -1.57
SEC18YBR080C MRPL51Q06090 140 aaPredicted RBP5.25□□□□□ -1.57
SEC18YBR080C DAP1Q12091 152 aa5.25□□□□□ -1.57
SEC18YBR080C BAR1P12630 587 aa5.25□□□□□ -1.57
SEC18YBR080C VEL1P53058 206 aa5.25□□□□□ -1.57
SEC18YBR080C YIF1P53845 314 aaKnown RBP5.25□□□□□ -1.57
SEC18YBR080C THI3Q07471 609 aa5.25□□□□□ -1.57
SEC18YBR080C PNS1Q12412 539 aa5.25□□□□□ -1.57
SEC18YBR080C SEC3P33332 1336 aaKnown RBP5.24□□□□□ -1.57
SEC18YBR080C HEM2P05373 342 aa5.24□□□□□ -1.57
SEC18YBR080C YBP1P38315 674 aa5.24□□□□□ -1.57
SEC18YBR080C DDI1P40087 428 aa5.24□□□□□ -1.57
SEC18YBR080C LAS21P40367 830 aa5.24□□□□□ -1.57
SEC18YBR080C QRI1P43123 477 aaKnown RBP5.24□□□□□ -1.57
SEC18YBR080C YJR141WP47172 347 aaPredicted RBP5.24□□□□□ -1.57
SEC18YBR080C COG2P53271 262 aa5.24□□□□□ -1.57
SEC18YBR080C YLR460CP54007 376 aa5.24□□□□□ -1.57
SEC18YBR080C ASI1P54074 624 aa5.24□□□□□ -1.57
SEC18YBR080C PEX10Q05568 337 aa5.24□□□□□ -1.57
SEC18YBR080C NOT5Q12514 560 aaPredicted RBP5.24□□□□□ -1.57
SEC18YBR080C SAC1P32368 623 aaKnown RBP5.23□□□□□ -1.57
SEC18YBR080C NUP2P32499 720 aa5.23□□□□□ -1.57
SEC18YBR080C BMT5P40493 336 aa5.23□□□□□ -1.57
SEC18YBR080C LSG1P53145 640 aaKnown RBP5.23□□□□□ -1.57
SEC18YBR080C LST7P53237 242 aa5.23□□□□□ -1.57
SEC18YBR080C SNO1Q03144 224 aa5.23□□□□□ -1.57
SEC18YBR080C CSM3Q04659 317 aa5.23□□□□□ -1.57
SEC18YBR080C YDL114WQ07530 308 aa5.23□□□□□ -1.57
SEC18YBR080C PLB3Q08108 686 aa5.23□□□□□ -1.57
SEC18YBR080C DET1Q99288 334 aaKnown RBP5.23□□□□□ -1.57
SEC18YBR080C HSL1P34244 1518 aa5.23□□□□□ -1.57
SEC18YBR080C SNA3P14359 133 aa5.23□□□□□ -1.57
SEC18YBR080C SRP102P36057 244 aaPredicted RBP5.23□□□□□ -1.57
SEC18YBR080C FLO10P36170 1169 aa5.23□□□□□ -1.57
SEC18YBR080C EDC3P39998 551 aaKnown RBP5.23□□□□□ -1.57
SEC18YBR080C VAB2P40003 282 aa5.23□□□□□ -1.57
SEC18YBR080C YIL060WP40519 144 aa5.23□□□□□ -1.57
SEC18YBR080C MRPL49P40858 161 aaPredicted RBP5.23□□□□□ -1.57
SEC18YBR080C JJJ3P47138 172 aa5.23□□□□□ -1.57
SEC18YBR080C YNR066CP53752 436 aa5.23□□□□□ -1.57
SEC18YBR080C YMR166CQ03829 368 aa5.23□□□□□ -1.57
SEC18YBR080C YDL144CQ07589 356 aa5.23□□□□□ -1.57
SEC18YBR080C MCH4Q08268 501 aa5.23□□□□□ -1.57
SEC18YBR080C SAM4Q08985 325 aaKnown RBP5.23□□□□□ -1.57
SEC18YBR080C WTM1Q12363 437 aaKnown RBP5.23□□□□□ -1.57
SEC18YBR080C TY1B-DR4Q07793 1604 aa5.23□□□□□ -1.57
SEC18YBR080C QCR2P07257 368 aa5.22□□□□□ -1.57
SEC18YBR080C MKK1P32490 508 aa5.22□□□□□ -1.57
SEC18YBR080C NTF2P33331 125 aaKnown RBP5.22□□□□□ -1.57
SEC18YBR080C YBR241CP38142 488 aa5.22□□□□□ -1.57
SEC18YBR080C YBR096WP38256 230 aa5.22□□□□□ -1.57
SEC18YBR080C FAU1P40099 211 aa5.22□□□□□ -1.57
SEC18YBR080C COS1P53822 381 aa5.22□□□□□ -1.57
SEC18YBR080C YDR248CQ03786 193 aa5.22□□□□□ -1.57
SEC18YBR080C MUM3Q08750 479 aa5.22□□□□□ -1.57
SEC18YBR080C YPL199CQ08954 240 aa5.22□□□□□ -1.57
SEC18YBR080C PET20Q99373 253 aa5.22□□□□□ -1.57
SEC18YBR080C TRP4P07285 380 aaPredicted RBP5.22□□□□□ -1.57
SEC18YBR080C ARF1P11076 181 aaKnown RBP5.22□□□□□ -1.57
SEC18YBR080C CHA1P25379 360 aaKnown RBP5.22□□□□□ -1.57
SEC18YBR080C IDH1P28834 360 aaKnown RBP RIP-Chip data5.22□□□□□ -1.57not detected
SEC18YBR080C ERV46P39727 415 aa5.22□□□□□ -1.57
SEC18YBR080C TDA10P42938 290 aa5.22□□□□□ -1.57
SEC18YBR080C JAC1P53193 184 aa5.22□□□□□ -1.57
SEC18YBR080C YNL040WP53960 456 aaPredicted RBP5.22□□□□□ -1.57
SEC18YBR080C ECI1Q05871 280 aa5.22□□□□□ -1.57
SEC18YBR080C ARP6Q12509 438 aa5.22□□□□□ -1.57
SEC18YBR080C HIS1P00498 297 aaKnown RBP5.21□□□□□ -1.58
SEC18YBR080C RPL31AP0C2H8 113 aaKnown RBP5.21□□□□□ -1.58
SEC18YBR080C SPO12P17123 173 aa5.21□□□□□ -1.58
SEC18YBR080C SLM5P25345 492 aaKnown RBP5.21□□□□□ -1.58
Retrieved 100 of 5,963 RNA–protein pairs in 47.5 ms