RNA–Protein interactions for RNA: ENST00000641570.1

PHGDH-220, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,036 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-220ENST00000641570 DACH1Q9UI36 760 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 TCHHQ07283 1943 aa14.33□□□□□ -0.12
PHGDH-220ENST00000641570 DOCK5Q9H7D0 1870 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 SMIM35A0A1B0GVV1 85 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 PVALEFA0A1B0GWK0 134 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 MYMKA6NI61 221 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 LRRIQ4A6NIV6 560 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 K7ENM7 598 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 C22orf31O95567 290 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 PHKA2P46019 1235 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 CLCN3P51790 818 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 NCBP1Q09161 790 aaKnown RBP14.32□□□□□ -0.12
PHGDH-220ENST00000641570 BFSP2Q13515 415 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 CUL4BQ13620 913 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 C1orf186Q6ZWK4 172 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 NME8Q8N427 588 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 TMEM143Q96AN5 459 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 PAWRQ96IZ0 340 aaKnown RBP14.32□□□□□ -0.12
PHGDH-220ENST00000641570 NLRP4Q96MN2 994 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 C2orf40Q9H1Z8 148 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 DHX33Q9H6R0 707 aaKnown RBP14.32□□□□□ -0.12
PHGDH-220ENST00000641570 MRPL44Q9H9J2 332 aaKnown RBP14.32□□□□□ -0.12
PHGDH-220ENST00000641570 KMT5AQ9NQR1 393 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 GINS2Q9Y248 185 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 ATP11BQ9Y2G3 1177 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 PCDHA2Q9Y5H9 948 aa14.32□□□□□ -0.12
PHGDH-220ENST00000641570 NPHP3-ACAD11A0A0J9YXS1 232 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 PLS3P13797 630 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 SCP2P22307 547 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 STRN3Q13033 797 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 PSMD2Q13200 908 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 PTK7Q13308 1070 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 ALCAMQ13740 583 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 TARBP2Q15633 366 aaKnown RBP14.31□□□□□ -0.12
PHGDH-220ENST00000641570 ABHD8Q96I13 439 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 GSDMAQ96QA5 445 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 HTATIP2Q9BUP3 242 aa14.31□□□□□ -0.12
PHGDH-220ENST00000641570 INO80BQ9C086 356 aaPredicted RBP14.31□□□□□ -0.12
PHGDH-220ENST00000641570 TREHO43280 583 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 GCNT3O95395 438 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 THPOP40225 353 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 PPP1R2P41236 205 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 NAMPTP43490 491 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 PEX3P56589 373 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 DPYDQ12882 1025 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 COASYQ13057 564 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 GIT2Q14161 759 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 FAM26FQ5R3K3 315 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 COL13A1Q5TAT6 717 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-220ENST00000641570 GDF6Q6KF10 455 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-220ENST00000641570 SLC39A5Q6ZMH5 540 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 TRIML1Q8N9V2 468 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 PPP1R13LQ8WUF5 828 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 BICD1Q96G01 975 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 GCOM2Q9BZD3 368 aaPredicted RBP14.3□□□□□ -0.12
PHGDH-220ENST00000641570 KIAA1468Q9P260 1216 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 EXOC7Q9UPT5 735 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 PCDHB13Q9Y5F0 798 aa14.3□□□□□ -0.12
PHGDH-220ENST00000641570 MBLAC1A4D2B0 266 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 BIN1O00499 593 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 CAND2O75155 1236 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 STBD1O95210 358 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 PRR29P0C7W0 189 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 SRGAP2CP0DJJ0 459 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 CCDC192P0DO97 292 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 EFNA5P52803 228 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 RTP1P59025 263 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 LAMTOR4Q0VGL1 99 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 KCNB1Q14721 858 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 KMT5BQ4FZB7 885 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 ZNF410Q86VK4 478 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 SFR1Q86XK3 245 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 SYCP3Q8IZU3 236 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 RNF149Q8NC42 400 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 CAGE1Q8TC20 777 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 DIS3LQ8TF46 1054 aaKnown RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 DNAJB3Q8WWF6 145 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 PRPF31Q8WWY3 499 aaKnown RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 PPP1R16BQ96T49 567 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 NAT10Q9H0A0 1025 aaKnown RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 GPRC5CQ9NQ84 441 aa14.29□□□□□ -0.12
PHGDH-220ENST00000641570 PRDM5Q9NQX1 630 aaPredicted RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 TRMT13Q9NUP7 481 aaKnown RBP14.29□□□□□ -0.12
PHGDH-220ENST00000641570 SFI1A8K8P3 1242 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 ZBTB42B2RXF5 422 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 ERLIN2O94905 339 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 VTNP04004 478 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 CTSHP09668 335 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 EN2P19622 333 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-220ENST00000641570 SFPQP23246 707 aaKnown RBP eCLIP14.28□□□□□ -0.12
PHGDH-220ENST00000641570 CASP1P29466 404 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 MATR3P43243 847 aaKnown RBP eCLIP14.28□□□□□ -0.12
PHGDH-220ENST00000641570 SOX10P56693 466 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 STX1AQ16623 288 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 TRIM60Q495X7 471 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 ARSHQ5FYA8 562 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 APBB1IPQ7Z5R6 666 aaPredicted RBP14.28□□□□□ -0.12
PHGDH-220ENST00000641570 SH3RF1Q7Z6J0 888 aa14.28□□□□□ -0.12
PHGDH-220ENST00000641570 LOXHD1Q8IVV2 1947 aa14.28□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms