RNA–Protein interactions for RNA: ENST00000601919.5

SSBP4-212, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 492 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-212ENST00000601919 DAW1Q8N136 415 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 ADSSL1Q8N142 457 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 GUF1Q8N442 669 aaKnown RBP20.53■□□□□ 0.88
SSBP4-212ENST00000601919 POLR3FQ9H1D9 316 aaPredicted RBP20.53■□□□□ 0.88
SSBP4-212ENST00000601919 XPNPEP1Q9NQW7 623 aa20.53■□□□□ 0.88
SSBP4-212ENST00000601919 IGKV6-21A0A0C4DH24 114 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 MOXD2PA6NHM9 499 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SMTNL1A8MU46 457 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 BECN2A8MW95 431 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 PPP1R3GB7ZBB8 358 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 C22orf31O95567 290 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SMIM10L2AP0DMW4 78 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SMIM10L2BP0DMW5 78 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 IGBP1P78318 339 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 IRX5P78411 483 aaPredicted RBP20.52■□□□□ 0.88
SSBP4-212ENST00000601919 MXD4Q14582 209 aaPredicted RBP20.52■□□□□ 0.88
SSBP4-212ENST00000601919 LRRC41Q15345 812 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 L1TD1Q5T7N2 865 aaKnown RBP20.52■□□□□ 0.88
SSBP4-212ENST00000601919 LHX8Q68G74 356 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 GAS2L3Q86XJ1 694 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SMYD4Q8IYR2 804 aaPredicted RBP20.52■□□□□ 0.88
SSBP4-212ENST00000601919 C7orf31Q8N865 590 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 KIAA0895Q8NCT3 520 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SPIRE2Q8WWL2 714 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 PSPC1Q8WXF1 523 aaKnown RBP20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SUGCTQ9HAC7 445 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 GPRC5CQ9NQ84 441 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 TBC1D7Q9P0N9 293 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 PCDHB13Q9Y5F0 798 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 PCDHA2Q9Y5H9 948 aa20.52■□□□□ 0.88
SSBP4-212ENST00000601919 SCN10AQ9Y5Y9 1956 aa20.52■□□□□ 0.87
SSBP4-212ENST00000601919 UBE4BO95155 1302 aa20.52■□□□□ 0.87
SSBP4-212ENST00000601919 BICDL2A1A5D9 508 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 EIF3DO15371 548 aaKnown RBP eCLIP20.51■□□□□ 0.87
SSBP4-212ENST00000601919 ASAP2O43150 1006 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 GCNT3O95395 438 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 ASGR1P07306 291 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 KLRC1P26715 233 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 ARL2P36404 184 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 PAK1Q13153 545 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 CCSAPQ6IQ19 270 aaPredicted RBP20.51■□□□□ 0.87
SSBP4-212ENST00000601919 KLHL10Q6JEL2 608 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 EFCAB12Q6NXP0 572 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 CXCL17Q6UXB2 119 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 METTL13Q8N6R0 699 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 HPS3Q969F9 1004 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 TMEM143Q96AN5 459 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 UNC93B1Q9H1C4 597 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 CBX8Q9HC52 389 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 POLD4Q9HCU8 107 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 PAK6Q9NQU5 681 aaPredicted RBP20.51■□□□□ 0.87
SSBP4-212ENST00000601919 EVPLQ92817 2033 aa20.51■□□□□ 0.87
SSBP4-212ENST00000601919 CCDC169A6NNP5 214 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 GOLGA6L19H0YKK7 550 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 CCL5P13501 91 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 PEX3P56589 373 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 TPM4P67936 248 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 MTHFD1LQ6UB35 978 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 ZNF720Q7Z2F6 126 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 TRAPPC12Q8WVT3 735 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 NTPCRQ9BSD7 190 aaKnown RBP20.5■□□□□ 0.87
SSBP4-212ENST00000601919 RNF208Q9H0X6 261 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 ST6GALNAC4Q9H4F1 302 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 KMT5AQ9NQR1 393 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 RWDD2AQ9UIY3 292 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 MAPK8IP1Q9UQF2 711 aa20.5■□□□□ 0.87
SSBP4-212ENST00000601919 C17orf102A2RUQ5 167 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 KBTBD13C9JR72 458 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 K7ENM7 598 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 IKBKBO14920 756 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 CD44P16070 742 aaKnown RBP20.49■□□□□ 0.87
SSBP4-212ENST00000601919 NAMPTP43490 491 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 NPTX2P47972 431 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 ACLYP53396 1101 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 MYL5Q02045 173 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 TFDP1Q14186 410 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 EPM2AIP1Q7L775 607 aaPredicted RBP20.49■□□□□ 0.87
SSBP4-212ENST00000601919 RNF214Q8ND24 703 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 ENOX1Q8TC92 643 aaKnown RBP20.49■□□□□ 0.87
SSBP4-212ENST00000601919 LMBR1Q8WVP7 490 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 NELFBQ8WX92 580 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 HVCN1Q96D96 273 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 MAP7D2Q96T17 732 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 TSG101Q99816 390 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 RBSNQ9H1K0 784 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 SETD4Q9NVD3 440 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 SUCLA2Q9P2R7 463 aaPredicted RBP20.49■□□□□ 0.87
SSBP4-212ENST00000601919 CTNND2Q9UQB3 1225 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 PHLPP2Q6ZVD8 1323 aa20.49■□□□□ 0.87
SSBP4-212ENST00000601919 PCNTO95613 3336 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 CCNE1P24864 410 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 NCKAP1LP55160 1127 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 SOX10P56693 466 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 CDC42EP1Q00587 391 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 BMT2Q1RMZ1 405 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 NFRKBQ6P4R8 1299 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 P2RX5Q93086 422 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 VTI1AQ96AJ9 217 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 GLT1D1Q96MS3 346 aa20.48■□□□□ 0.87
SSBP4-212ENST00000601919 MBLAC1A4D2B0 266 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 161.7 ms