RNA–Protein interactions for RNA: ENST00000601236.1

U2AF1L4-221, Transcript of U2 small nuclear RNA auxiliary factor 1 like 4, human

TSL 3

Gene U2AF1L4, Length 455 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
U2AF1L4-221	ENST00000601236	NSMCE1	Q8WV22	266 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	HPS3	Q969F9	1004 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	KLHL29	Q96CT2	875 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	TMEM47	Q9BQJ4	181 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	VCX	Q9H320	206 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MCM9	Q9NXL9	1143 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	LGALS13	Q9UHV8	139 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PHLPP1	O60346	1717 aa		12.7	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MYH7B	A7E2Y1	1941 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	KIAA0391	O15091	583 aa	Known RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MAGEB2	O15479	319 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	COBL	O75128	1261 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SMNDC1	O75940	238 aa	Known RBP eCLIP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	NEBL	O76041	1014 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	NPTXR	O95502	500 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ABHD2	P08910	425 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	GZMA	P12544	262 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ALAS1	P13196	640 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CALCOCO2	Q13137	446 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ALCAM	Q13740	583 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PLS1	Q14651	629 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	QPCT	Q16769	361 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	TSNAXIP1	Q2TAA8	658 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CDCA2	Q69YH5	1023 aa	Predicted RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	C16orf86	Q6ZW13	317 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	BZW1	Q7L1Q6	419 aa	Known RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ASRGL1	Q7L266	308 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	EPM2AIP1	Q7L775	607 aa	Predicted RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ZNF571	Q7Z3V5	609 aa	Predicted RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SDCCAG8	Q86SQ7	713 aa	Predicted RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ANKRD35	Q8N283	1001 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ARHGAP18	Q8N392	663 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ANKRD13C	Q8N6S4	541 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	FAM133A	Q8N9E0	248 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	HELB	Q8NG08	1087 aa	Predicted RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	FAM163A	Q96GL9	167 aa	Predicted RBP	12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MAGEB18	Q96M61	343 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PSMB7	Q99436	277 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	IL17RB	Q9NRM6	502 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SLC5A4	Q9NY91	659 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	AMACR	Q9UHK6	382 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PCDHA12	Q9UN75	941 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ZBTB1	Q9Y2K1	713 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ITGB4	P16144	1822 aa		12.69	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PNMA6F	A0A0J9YX94	578 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	hCG_1642624	A0A1W2PR95	340 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MAPK13	O15264	365 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CYTH3	O43739	400 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CAMTA2	O94983	1202 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	FOS	P01100	380 aa	Predicted RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	FGG	P02679	453 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ATP5B	P06576	529 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SNHG28	P0DPA3	235 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	BCR	P11274	1271 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	NR2F2	P24468	414 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PON1	P27169	355 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SOX5	P35711	763 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	TXK	P42681	527 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MSH2	P43246	934 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SSR1	P43307	286 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	EVA1C	P58658	441 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	MCCD1	P59942	119 aa	Predicted RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	EPHA7	Q15375	998 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CHRNA2	Q15822	529 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CNGA2	Q16280	664 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ZC3H12A	Q5D1E8	599 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SEL1L2	Q5TEA6	688 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	DPY19L2P1	Q6NXN4	242 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SPATA21	Q7Z572	469 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	DZIP1	Q86YF9	867 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	JAML	Q86YT9	394 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ATP8B4	Q8TF62	1192 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CKAP2	Q8WWK9	683 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	GPKOW	Q92917	476 aa	Predicted RBP eCLIP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ART4	Q93070	314 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	FAM20A	Q96MK3	541 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	DDX47	Q9H0S4	455 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	LRMDA	Q9H2I8	198 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	SAR1A	Q9NR31	198 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CPSF2	Q9P2I0	782 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CNOT8	Q9UFF9	292 aa	Known RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ASAP1	Q9ULH1	1129 aa		12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ZNF330	Q9Y3S2	320 aa	Predicted RBP	12.68	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ZSCAN5C	A6NGD5	496 aa	Predicted RBP	12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236		A6NHS1	94 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PHF20L1	A8MW92	1017 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	TTI1	O43156	1089 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CAND2	O75155	1236 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	UNC5C	O95185	931 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PLA2G4B	P0C869	781 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PDHB	P11177	359 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ACADS	P16219	412 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	BRD2	P25440	801 aa	Known RBP	12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	TMOD1	P28289	359 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	PSMC2	P35998	433 aa	Known RBP	12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	CLK2	P49760	499 aa	Known RBP	12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	NCALD	P61601	193 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	DYNLL1	P63167	89 aa	Known RBP	12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	STAT4	Q14765	748 aa		12.67	□□□□□ -0.38
U2AF1L4-221	ENST00000601236	ZNF568	Q3ZCX4	644 aa		12.67	□□□□□ -0.38

Retrieved 100 of 20,778 RNA–protein pairs in 119.3 ms