RNA–Protein interactions for RNA: ENST00000588780.5

CAPNS1-205, Transcript of calpain small subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CAPNS1, Length 1,035 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-205ENST00000588780 CCDC60Q8IWA6 550 aaPredicted RBP24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 SIX5Q8N196 739 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 VPS52Q8N1B4 723 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 HELQQ8TDG4 1101 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 AUTS2Q8WXX7 1259 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 SCLT1Q96NL6 688 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 TCEAL9Q9UHQ7 104 aa24.76■■□□□ 1.55
CAPNS1-205ENST00000588780 GPR32O75388 356 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 CCNE2O96020 404 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 LMNAP02545 664 aaKnown RBP24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 ABHD15Q6UXT9 468 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 CCDC149Q6ZUS6 474 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 OTOP3Q7RTS5 596 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 KIAA2013Q8IYS2 634 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 RMDN1Q96DB5 314 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 MAP7D2Q96T17 732 aa24.75■■□□□ 1.55
CAPNS1-205ENST00000588780 IGKV6D-21A0A0A0MT36 114 aa24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 MED19A0JLT2 244 aaPredicted RBP24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 C22orf31O95567 290 aa24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 BCAR1P56945 870 aa24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 NLRP11P59045 1033 aaKnown RBP24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 CLLU1OSQ5K130 101 aa24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 MB21D2Q8IYB1 491 aaPredicted RBP24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 MRPL9Q9BYD2 267 aaKnown RBP24.74■■□□□ 1.55
CAPNS1-205ENST00000588780 PRC1O43663 620 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 ZC3H11AO75152 810 aaKnown RBP eCLIP24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 CALM1P0DP23 149 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 CALM2P0DP24 149 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 CALM3P0DP25 149 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 NPR3P17342 541 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 CLCN3P51790 818 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 NAPAP54920 295 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 TMTC2Q8N394 836 aa24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 ZNF668Q96K58 619 aaPredicted RBP24.73■■□□□ 1.55
CAPNS1-205ENST00000588780 VPS13AQ96RL7 3174 aa24.72■■□□□ 1.55
CAPNS1-205ENST00000588780 ZBTB42B2RXF5 422 aa24.72■■□□□ 1.55
CAPNS1-205ENST00000588780 TMOD1P28289 359 aa24.72■■□□□ 1.55
CAPNS1-205ENST00000588780 GIT2Q14161 759 aa24.72■■□□□ 1.55
CAPNS1-205ENST00000588780 BBXQ8WY36 941 aaPredicted RBP24.72■■□□□ 1.55
CAPNS1-205ENST00000588780 ANO3Q9BYT9 981 aa24.72■■□□□ 1.55
CAPNS1-205ENST00000588780 FOSP01100 380 aaPredicted RBP24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 ZBP1Q9H171 429 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 SEMA4AQ9H3S1 761 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 KCNK12Q9HB15 430 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 DUSP12Q9UNI6 340 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 CEP131Q9UPN4 1083 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 SLC12A7Q9Y666 1083 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 R4GN57 208 aa24.71■■□□□ 1.55
CAPNS1-205ENST00000588780 MEIS1O00470 390 aa24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 EIF4BP23588 611 aaKnown RBP24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 ADCY7P51828 1080 aa24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 EFCAB12Q6NXP0 572 aa24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 PLA2G4DQ86XP0 818 aa24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 RIN2Q8WYP3 895 aaPredicted RBP24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 SFXN1Q9H9B4 322 aa24.7■■□□□ 1.54
CAPNS1-205ENST00000588780 MAGEB2O15479 319 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 CFHP08603 1231 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 ATP4AP20648 1035 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 PPFIBP1Q86W92 1011 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 LRRC71Q8N4P6 559 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 RIC8AQ9NPQ8 531 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 DACT1Q9NYF0 836 aa24.69■■□□□ 1.54
CAPNS1-205ENST00000588780 DCHS1Q96JQ0 3298 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 A0A0U1RQF3 1178 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 IGHDP01880 384 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 CTSAP10619 480 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 FGFR4P22455 802 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 MCM5P33992 734 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 WWC2Q6AWC2 1192 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 TMTC3Q6ZXV5 915 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 GPR149Q86SP6 731 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 SLC22A17Q8WUG5 538 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 SAMM50Q9Y512 469 aa24.68■■□□□ 1.54
CAPNS1-205ENST00000588780 DMDP11532 3685 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 SH2B2O14492 632 aaPredicted RBP24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 KLRC2P26717 231 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 POLGP54098 1239 aaPredicted RBP24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 RNASELQ05823 741 aaKnown RBP24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 PUM1Q14671 1186 aaKnown RBP eCLIP24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 LONRF3Q496Y0 759 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 SPECC1Q5M775 1068 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 DDX53Q86TM3 631 aaKnown RBP24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 MICU3Q86XE3 530 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 FANCBQ8NB91 859 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 FEZF2Q8TBJ5 459 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 NLRP7Q8WX94 980 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 TMEM87BQ96K49 555 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 GBP3Q9H0R5 595 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 ADAMTS10Q9H324 1103 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 GABBR1Q9UBS5 961 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 INPP5FQ9Y2H2 1132 aa24.67■■□□□ 1.54
CAPNS1-205ENST00000588780 IPO5O00410 1097 aaKnown RBP24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 NARSO43776 548 aaKnown RBP24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 SSBP05455 408 aaKnown RBP eCLIP24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 PSAPP07602 524 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 GBP2P32456 591 aaPredicted RBP24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 NONOQ15233 471 aaKnown RBP eCLIP24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 SYNE3Q6ZMZ3 975 aa24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 TMEM173Q86WV6 379 aaPredicted RBP24.66■■□□□ 1.54
CAPNS1-205ENST00000588780 IGSF21Q96ID5 467 aa24.66■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms