RNA–Protein interactions for RNA: ENST00000585448.1

SMAD4-203, Transcript of SMAD family member 4, humanhuman

TSL 5

Gene SMAD4, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD4-203ENST00000585448 CACTINQ8WUQ7 758 aaKnown RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 SCLT1Q96NL6 688 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 GORASP1Q9BQQ3 440 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 RNF32Q9H0A6 362 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 ACTR5Q9H9F9 607 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 TUBA8Q9NY65 449 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 LRP2BPQ9P2M1 347 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 PPP1R1BQ9UD71 204 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 ATP6V1DQ9Y5K8 247 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 GMEB1Q9Y692 573 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 TAF6LQ9Y6J9 622 aa6.8□□□□□ -1.32
SMAD4-203ENST00000585448 PRDM15P57071 1507 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 ZNF608Q9ULD9 1512 aaPredicted RBP6.8□□□□□ -1.32
SMAD4-203ENST00000585448 KIF14Q15058 1648 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 GRIN2AQ12879 1464 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 ABLIM1O14639 778 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 NPHP1O15259 732 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CDC45O75419 566 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 SEC31AO94979 1220 aaKnown RBP6.79□□□□□ -1.32
SMAD4-203ENST00000585448 LUC7L3O95232 432 aaKnown RBP6.79□□□□□ -1.32
SMAD4-203ENST00000585448 EFEMP2O95967 443 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 VIL1P09327 827 aaKnown RBP6.79□□□□□ -1.32
SMAD4-203ENST00000585448 DESP17661 470 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 PAMP19021 973 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 STIP1P31948 543 aaKnown RBP6.79□□□□□ -1.32
SMAD4-203ENST00000585448 L1CAMP32004 1257 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 GFRA1P56159 465 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 EVCP57679 992 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 PPP2R2AP63151 447 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 MAP4K2Q12851 820 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 LRMPQ12912 555 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 TUBB2AQ13885 445 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 KRT72Q14CN4 511 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 DPY19L1Q2PZI1 675 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 Q4G0T1 1027 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 IQCEQ6IPM2 695 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 MIS18BP1Q6P0N0 1132 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 SYNE3Q6ZMZ3 975 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CCDC73Q6ZRK6 1079 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CCDC65Q8IXS2 484 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 GALNT15Q8N3T1 639 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 SMYD1Q8NB12 490 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 NPLOC4Q8TAT6 608 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CCHCR1Q8TD31 782 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 BTN2A2Q8WVV5 523 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 GOLGA1Q92805 767 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CUL5Q93034 780 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 ANKRD27Q96NW4 1050 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 JMJD8Q96S16 334 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 PAGR1Q9BTK6 254 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 TUBB2BQ9BVA1 445 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 TRIM5Q9C035 493 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 IRF2BPLQ9H1B7 796 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 C19orf44Q9H6X5 657 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 VIPAS39Q9H9C1 493 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CD248Q9HCU0 757 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 IMPACTQ9P2X3 320 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 CTDP1Q9Y5B0 961 aaPredicted RBP6.79□□□□□ -1.32
SMAD4-203ENST00000585448 FAM135AQ9P2D6 1515 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 RTL1A6NKG5 1358 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 ANKRD30BQ9BXX2 1392 aa6.79□□□□□ -1.32
SMAD4-203ENST00000585448 AQRO60306 1485 aaKnown RBP eCLIP6.79□□□□□ -1.32
SMAD4-203ENST00000585448 FGD6Q6ZV73 1430 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 ABCC2Q92887 1545 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 AP5Z1O43299 807 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 ZSCAN12O43309 604 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 TBX1O43435 398 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 TIMM44O43615 452 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 BCAR3O75815 825 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 RASSF9O75901 435 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 RNF8O76064 485 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 PENKP01210 267 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-203ENST00000585448 FGFR1P11362 822 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 RPL13P26373 211 aaKnown RBP6.78□□□□□ -1.32
SMAD4-203ENST00000585448 TRHRP34981 398 aaPredicted RBP6.78□□□□□ -1.32
SMAD4-203ENST00000585448 ERVFRD-1P60508 538 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 MPP3Q13368 585 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 PKN1Q16512 942 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 C1orf159Q96HA4 380 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 DEPDC7Q96QD5 511 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 SPAG5Q96R06 1193 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 MPHOSPH8Q99549 860 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 TSC22D3Q99576 134 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 NACA2Q9H009 215 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 NAT10Q9H0A0 1025 aaKnown RBP6.78□□□□□ -1.32
SMAD4-203ENST00000585448 OSBPL2Q9H1P3 480 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 RETREG1Q9H6L5 497 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 PAPOLBQ9NRJ5 636 aaKnown RBP6.78□□□□□ -1.32
SMAD4-203ENST00000585448 GPR160Q9UJ42 338 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 RNF114Q9Y508 228 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 MRFAP1Q9Y605 127 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 MBD5Q9P267 1494 aa6.78□□□□□ -1.32
SMAD4-203ENST00000585448 GCC2Q8IWJ2 1684 aa6.77□□□□□ -1.32
SMAD4-203ENST00000585448 PPIP5K1Q6PFW1 1433 aa6.77□□□□□ -1.33
SMAD4-203ENST00000585448 ABCA10Q8WWZ4 1543 aa6.77□□□□□ -1.33
SMAD4-203ENST00000585448 ENO4A6NNW6 628 aa6.77□□□□□ -1.33
SMAD4-203ENST00000585448 MEFVO15553 781 aaPredicted RBP6.77□□□□□ -1.33
SMAD4-203ENST00000585448 HMMRO75330 724 aa6.77□□□□□ -1.33
SMAD4-203ENST00000585448 THBDP07204 575 aa6.77□□□□□ -1.33
SMAD4-203ENST00000585448 IDO1P14902 403 aa6.77□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms