RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 VSIG10LQ86VR7 867 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 AFAP1L2Q8N4X5 818 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 PCDH19Q8TAB3 1148 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 ALG1Q9BT22 464 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 CDIP1Q9H305 208 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 CCDC39Q9UFE4 941 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 RAPGEFL1Q9UHV5 662 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 TRIM17Q9Y577 477 aa6.96□□□□□ -1.3
SF3B3-214ENST00000572365 TIMM13Q9Y5L4 95 aaPredicted RBP6.96□□□□□ -1.3
SF3B3-214ENST00000572365 KIF24Q5T7B8 1368 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 A0A1W2PQ45 241 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 A0A1W2PQY0 241 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 KLRG2A4D1S0 409 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 YDJCA8MPS7 323 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 H7C1D1 291 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 MYO1BO43795 1136 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 NPHS1O60500 1241 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 JMJD7P0C870 316 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 KIR2DL1P43626 348 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 KIR2DL2P43627 348 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 GTF2A2P52657 109 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 RPL11P62913 178 aaKnown RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 LSAMPQ13449 338 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 PRKG1Q13976 671 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 CFAP100Q494V2 611 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 CT47A1Q5JQC4 288 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 UBE2R2Q712K3 238 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 SLCO6A1Q86UG4 719 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 RASAL3Q86YV0 1011 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 TTC5Q8N0Z6 440 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 Q8N1Y9 231 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 UBR7Q8N806 425 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 DPF3Q92784 378 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 RPGRQ92834 1020 aaKnown RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 ALPK1Q96QP1 1244 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 FAM126AQ9BYI3 521 aaPredicted RBP6.95□□□□□ -1.3
SF3B3-214ENST00000572365 ADAMTS10Q9H324 1103 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 ATP8A1Q9Y2Q0 1164 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 SCN7AQ01118 1682 aa6.95□□□□□ -1.3
SF3B3-214ENST00000572365 SOD2P04179 222 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 CKMP06732 381 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 GPTP24298 496 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 IL6STP40189 918 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 NEK4P51957 841 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 NFKB2Q00653 900 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 CAP1Q01518 475 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 PCBP1Q15365 356 aaKnown RBP eCLIP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 MTHFSDQ2M296 383 aaKnown RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 RALGPS1Q5JS13 557 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 XP32Q5T750 250 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 CDCA2Q69YH5 1023 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 PKN3Q6P5Z2 889 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 ZNF574Q6ZN55 896 aaPredicted RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 NFXL1Q6ZNB6 911 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 DDX46Q7L014 1031 aaKnown RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 DDX53Q86TM3 631 aaKnown RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 KIF18BQ86Y91 864 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 ZC3H7AQ8IWR0 971 aaKnown RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 DCPSQ96C86 337 aaKnown RBP6.94□□□□□ -1.3
SF3B3-214ENST00000572365 SLAMF8Q9P0V8 285 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 FBXL7Q9UJT9 491 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 TMEM59LQ9UK28 342 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 FZD1Q9UP38 647 aa6.94□□□□□ -1.3
SF3B3-214ENST00000572365 PSMD14O00487 310 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 BCL6P41182 706 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 CORO7P57737 925 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 DHCR24Q15392 516 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 SEPT7Q16181 437 aaKnown RBP6.93□□□□□ -1.3
SF3B3-214ENST00000572365 Q7L0L9 218 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 JAMLQ86YT9 394 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 ANKS4BQ8N8V4 417 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 LEO1Q8WVC0 666 aaPredicted RBP6.93□□□□□ -1.3
SF3B3-214ENST00000572365 CDCA5Q96FF9 252 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 WNK4Q96J92 1243 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 JMJD8Q96S16 334 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 CELF4Q9BZC1 486 aaKnown RBP6.93□□□□□ -1.3
SF3B3-214ENST00000572365 SAMD15Q9P1V8 674 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 ADGRE2Q9UHX3 823 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 ABCC12Q96J65 1359 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 SNED1Q8TER0 1413 aa6.93□□□□□ -1.3
SF3B3-214ENST00000572365 NUP98P52948 1817 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 FAM47E-STBD1D6RA91 191 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 H7BY64 318 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 KPNA6O60684 536 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 PPP1R11O60927 126 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-214ENST00000572365 EYA4O95677 639 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 FUT4P22083 530 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 GRK2P25098 689 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 GRK3P35626 688 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 RTP1P59025 263 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 CNGB1Q14028 1251 aaPredicted RBP6.92□□□□□ -1.3
SF3B3-214ENST00000572365 PIK3R6Q5UE93 754 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 ZNF790Q6PG37 636 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 SLC23A3Q6PIS1 610 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 OTOP1Q7RTM1 612 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 STRA8Q7Z7C7 330 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 NLRP10Q86W26 655 aa6.92□□□□□ -1.3
SF3B3-214ENST00000572365 DDX42Q86XP3 938 aaKnown RBP eCLIP6.92□□□□□ -1.3
SF3B3-214ENST00000572365 IGSF22Q8N9C0 903 aa6.92□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms