RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, humanhuman

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-223ENST00000533079 hCG_1984214I3L0E3 225 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 MEIS1O00470 390 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 ARP10275 920 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 SREBF1P36956 1147 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 TDGQ13569 410 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 NFXL1Q6ZNB6 911 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 OTOP3Q7RTS5 596 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 HEATR3Q7Z4Q2 680 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 ZNF713Q8N859 430 aaPredicted RBP14.12□□□□□ -0.15
CAPN1-223ENST00000533079 TMEM87AQ8NBN3 555 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 MAP7D2Q96T17 732 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 LIMD1Q9UGP4 676 aa14.12□□□□□ -0.15
CAPN1-223ENST00000533079 A0A0U1RQF3 1178 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 MAGEB2O15479 319 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 CCNE2O96020 404 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 LMNAP02545 664 aaKnown RBP14.11□□□□□ -0.15
CAPN1-223ENST00000533079 VTNP04004 478 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 EIF4BP23588 611 aaKnown RBP14.11□□□□□ -0.15
CAPN1-223ENST00000533079 TMOD1P28289 359 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 CA8P35219 290 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 LIFRP42702 1097 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 PTH1RQ03431 593 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 CLLU1OSQ5K130 101 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 CABP7Q86V35 215 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 SMAP1Q8IYB5 467 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-223ENST00000533079 DTWD2Q8NBA8 298 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 CYP2W1Q8TAV3 490 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 FAM167AQ96KS9 214 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 ANO3Q9BYT9 981 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 GLT8D2Q9H1C3 349 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 RIC8AQ9NPQ8 531 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 DACT1Q9NYF0 836 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 TCEAL9Q9UHQ7 104 aa14.11□□□□□ -0.15
CAPN1-223ENST00000533079 MAFBQ9Y5Q3 323 aaPredicted RBP14.11□□□□□ -0.15
CAPN1-223ENST00000533079 ZNF292O60281 2723 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 SH2B2O14492 632 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-223ENST00000533079 PRC1O43663 620 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 CXCL14O95715 111 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 CTSAP10619 480 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 NPR3P17342 541 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 MCM5P33992 734 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 METAP2P50579 478 aaKnown RBP eCLIP14.1□□□□□ -0.15
CAPN1-223ENST00000533079 BCAR1P56945 870 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 SETQ01105 290 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-223ENST00000533079 ZNF746Q6NUN9 644 aaPredicted RBP14.1□□□□□ -0.15
CAPN1-223ENST00000533079 ZC3H14Q6PJT7 736 aaKnown RBP14.1□□□□□ -0.15
CAPN1-223ENST00000533079 C15orf39Q6ZRI6 1047 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 TMTC3Q6ZXV5 915 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 CKAP2LQ8IYA6 745 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 VPS52Q8N1B4 723 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 METTL13Q8N6R0 699 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 PPP1R16BQ96T49 567 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 IGSF9Q9P2J2 1179 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 FBXL21Q9UKT6 434 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 AKT3Q9Y243 479 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 TAF6LQ9Y6J9 622 aa14.1□□□□□ -0.15
CAPN1-223ENST00000533079 DDX39AO00148 427 aaKnown RBP14.09□□□□□ -0.15
CAPN1-223ENST00000533079 WEE2P0C1S8 567 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 EPCAMP16422 314 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 ADCY7P51828 1080 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 NAPAP54920 295 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 SWSAP1Q6NVH7 229 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 DGLUCYQ7Z3D6 616 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 GPR149Q86SP6 731 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 DDX53Q86TM3 631 aaKnown RBP14.09□□□□□ -0.15
CAPN1-223ENST00000533079 ZNF598Q86UK7 904 aaKnown RBP14.09□□□□□ -0.15
CAPN1-223ENST00000533079 SIX5Q8N196 739 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 CMTR1Q8N1G2 835 aaKnown RBP14.09□□□□□ -0.15
CAPN1-223ENST00000533079 LINC01465Q8N7H1 131 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 SLC22A17Q8WUG5 538 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 TRAIPQ9BWF2 469 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 ADAMTS10Q9H324 1103 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 TBC1D22BQ9NU19 505 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 SLC12A7Q9Y666 1083 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 FRYLO94915 3013 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 GVINP1Q7Z2Y8 2422 aa14.09□□□□□ -0.15
CAPN1-223ENST00000533079 FAM186AA6NE01 2351 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 IPO5O00410 1097 aaKnown RBP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 ZC3H11AO75152 810 aaKnown RBP eCLIP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 SKIP12755 728 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 GSPT1P15170 499 aaKnown RBP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 ATP4AP20648 1035 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 ZNF76P36508 570 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 CLK2P49760 499 aaKnown RBP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 CLCN3P51790 818 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 NLRP11P59045 1033 aaKnown RBP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 PUM1Q14671 1186 aaKnown RBP eCLIP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 NONOQ15233 471 aaKnown RBP eCLIP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 TTC22Q5TAA0 569 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 WWC2Q6AWC2 1192 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 C12orf76Q8N812 135 aaPredicted RBP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 RNF169Q8NCN4 708 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 HELQQ8TDG4 1101 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 MAP4K1Q92918 833 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 RMDN1Q96DB5 314 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 RHOBTB2Q9BYZ6 727 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 KCNK12Q9HB15 430 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 CHST12Q9NRB3 414 aa14.08□□□□□ -0.16
CAPN1-223ENST00000533079 RBM28Q9NW13 759 aaKnown RBP14.08□□□□□ -0.16
CAPN1-223ENST00000533079 WNT16Q9UBV4 365 aa14.08□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 132.8 ms