RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 ZNF862O60290 1169 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 TMEM62Q0P6H9 643 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 CUL4AQ13619 759 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 SMAD2Q15796 467 aaKnown RBP21.43■■□□□ 1.02
PKP3-204ENST00000526971 UGCGQ16739 394 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 MTHFD1LQ6UB35 978 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 FAM167AQ96KS9 214 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 COL1A2P08123 1366 aa21.43■■□□□ 1.02
PKP3-204ENST00000526971 ZBTB42B2RXF5 422 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 EML1O00423 815 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 NEMFO60524 1076 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 RPLP2P05387 115 aaKnown RBP21.42■■□□□ 1.02
PKP3-204ENST00000526971 ATP2B1P20020 1258 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 U2AF2P26368 475 aaKnown RBP eCLIP21.42■■□□□ 1.02
PKP3-204ENST00000526971 KLRC1P26715 233 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 GATMP50440 423 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 CALCRLQ16602 461 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 NRBP2Q9NSY0 501 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 PLAGL2Q9UPG8 496 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 FAM50BQ9Y247 325 aa21.42■■□□□ 1.02
PKP3-204ENST00000526971 WDR81Q562E7 1941 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 NCK2O43639 380 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 OATP04181 439 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 ITGB1P05556 798 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 PRKCEQ02156 737 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 TRMT1LQ7Z2T5 733 aaKnown RBP21.41■■□□□ 1.02
PKP3-204ENST00000526971 ADGRD2Q7Z7M1 963 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 IGFLR1Q9H665 355 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 CEP131Q9UPN4 1083 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 TRPV2Q9Y5S1 764 aa21.41■■□□□ 1.02
PKP3-204ENST00000526971 SMIM35A0A1B0GVV1 85 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 MCM7P33993 719 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 TRAPPC10P48553 1259 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 SPIRE1Q08AE8 756 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 ORC2Q13416 577 aaPredicted RBP21.4■■□□□ 1.02
PKP3-204ENST00000526971 CSPP1Q1MSJ5 1256 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 PAN2Q504Q3 1202 aaKnown RBP21.4■■□□□ 1.02
PKP3-204ENST00000526971 CMTR2Q8IYT2 770 aaKnown RBP21.4■■□□□ 1.02
PKP3-204ENST00000526971 MTMR9Q96QG7 549 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 PLVAPQ9BX97 442 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 TMX1Q9H3N1 280 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 PADI3Q9ULW8 664 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 PCDHA12Q9UN75 941 aa21.4■■□□□ 1.02
PKP3-204ENST00000526971 C22orf31O95567 290 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 PSMC5P62195 406 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 SMAD4Q13485 552 aaKnown RBP21.39■■□□□ 1.01
PKP3-204ENST00000526971 EPHA7Q15375 998 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 XKR3Q5GH77 459 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 ALYREFQ86V81 257 aaKnown RBP21.39■■□□□ 1.01
PKP3-204ENST00000526971 NPAS4Q8IUM7 802 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 NME8Q8N427 588 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 SPPL3Q8TCT6 385 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 P2RX5Q93086 422 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 TMEM60Q9H2L4 133 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 MUTYHQ9UIF7 546 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 NOL7Q9UMY1 257 aaKnown RBP21.39■■□□□ 1.01
PKP3-204ENST00000526971 PCDHGC5Q9Y5F6 944 aa21.39■■□□□ 1.01
PKP3-204ENST00000526971 MYH9P35579 1960 aaKnown RBP21.39■■□□□ 1.01
PKP3-204ENST00000526971 H3BQV1 296 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 STBD1O95210 358 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 TXKP42681 527 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 ADAM15Q13444 863 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 ZNF174Q15697 407 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 TTC38Q5R3I4 469 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 IER5Q5VY09 327 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 NCAPH2Q6IBW4 605 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 HFE2Q6ZVN8 426 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 KLHL23Q8NBE8 558 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 MSLNLQ96KJ4 702 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 NIFKQ9BYG3 293 aaKnown RBP21.38■■□□□ 1.01
PKP3-204ENST00000526971 TTC12Q9H892 705 aaPredicted RBP21.38■■□□□ 1.01
PKP3-204ENST00000526971 CD207Q9UJ71 328 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 SQORQ9Y6N5 450 aa21.38■■□□□ 1.01
PKP3-204ENST00000526971 MAGEB2O15479 319 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 P4HBP07237 508 aaKnown RBP21.37■■□□□ 1.01
PKP3-204ENST00000526971 QARSP47897 775 aaKnown RBP21.37■■□□□ 1.01
PKP3-204ENST00000526971 PAK2Q13177 524 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 TMEM266Q2M3C6 531 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 LARP1BQ659C4 914 aaKnown RBP21.37■■□□□ 1.01
PKP3-204ENST00000526971 MCTP1Q6DN14 999 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 KIAA0319LQ8IZA0 1049 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 FTHL17Q9BXU8 183 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 CELF4Q9BZC1 486 aaKnown RBP21.37■■□□□ 1.01
PKP3-204ENST00000526971 CLEC1BQ9P126 229 aa21.37■■□□□ 1.01
PKP3-204ENST00000526971 KDM3AQ9Y4C1 1321 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 DDX11L8A8MPP1 907 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 MGEA5O60502 916 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 DKC1O60832 514 aaKnown RBP eCLIP21.36■■□□□ 1.01
PKP3-204ENST00000526971 GLP2RO95838 553 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 TOB1P50616 345 aaPredicted RBP21.36■■□□□ 1.01
PKP3-204ENST00000526971 TARBP2Q15633 366 aaKnown RBP21.36■■□□□ 1.01
PKP3-204ENST00000526971 RNF135Q8IUD6 432 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 SNX21Q969T3 373 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 FBXL18Q96ME1 805 aa21.36■■□□□ 1.01
PKP3-204ENST00000526971 SEPT9Q9UHD8 586 aaPredicted RBP21.36■■□□□ 1.01
PKP3-204ENST00000526971 K7ELQ4 463 aaPredicted RBP21.35■■□□□ 1.01
PKP3-204ENST00000526971 M0QZ92 97 aa21.35■■□□□ 1.01
PKP3-204ENST00000526971 NDUFV1P49821 464 aa21.35■■□□□ 1.01
PKP3-204ENST00000526971 HERC4Q5GLZ8 1057 aaPredicted RBP21.35■■□□□ 1.01
PKP3-204ENST00000526971 METTL13Q8N6R0 699 aa21.35■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 81.3 ms