RNA–Protein interactions for RNA: ENST00000495688.5

PTPN7-217, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 1 (best)

Gene PTPN7, Length 2,689 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-217ENST00000495688 MYCBPAPQ8TBZ2 947 aa14.16□□□□□ -0.14
PTPN7-217ENST00000495688 GPR88Q9GZN0 384 aa14.16□□□□□ -0.14
PTPN7-217ENST00000495688 DNAJC5Q9H3Z4 198 aa14.16□□□□□ -0.14
PTPN7-217ENST00000495688 SEPT11Q9NVA2 429 aaKnown RBP14.16□□□□□ -0.14
PTPN7-217ENST00000495688 BHMG1C9JSJ3 638 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 UBAP1LF5GYI3 381 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 FERP16591 822 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 CIITAP33076 1130 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 SOX5P35711 763 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 PSMC2P35998 433 aaKnown RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 FMO5P49326 533 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 ZNF211Q13398 564 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 PLS1Q14651 629 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 ABCB5Q2M3G0 1257 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 AADACL2Q6P093 401 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 TATDN1Q6P1N9 297 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 C1orf186Q6ZWK4 172 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 OTOP1Q7RTM1 612 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 BANK1Q8NDB2 785 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 FIZ1Q96SL8 496 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 POLR3CQ9BUI4 534 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 A6NNZ2 444 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 FOSP01100 380 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 BMP3P12645 472 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 TUBB8Q3ZCM7 444 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 SAMD1Q6SPF0 538 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 TMEM179Q6ZVK1 233 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 ERVK-5Q9HDB9 667 aa14.15□□□□□ -0.14
PTPN7-217ENST00000495688 CNOT8Q9UFF9 292 aaKnown RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 CHORDC1Q9UHD1 332 aaPredicted RBP14.15□□□□□ -0.14
PTPN7-217ENST00000495688 A0A0A6YYK5 440 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 MEFVO15553 781 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 TOM1O60784 492 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 ECE1P42892 770 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 KIAA1755Q5JYT7 1200 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 ICE2Q659A1 982 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 B4GALNT4Q76KP1 1039 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 TMC3Q7Z5M5 1100 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 LMBR1Q8WVP7 490 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 GLG1Q92896 1179 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 LRRC45Q96CN5 670 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 GJD4Q96KN9 370 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 THAP2Q9H0W7 228 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 ZNF219Q9P2Y4 722 aaPredicted RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 AMFRQ9UKV5 643 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 COG5Q9UP83 839 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 CAPN7Q9Y6W3 813 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 ANKRD31Q8N7Z5 1873 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 GTPBP10A4D1E9 387 aaKnown RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 CCDC188H7C350 402 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 CLSTN1O94985 981 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 POU5F1Q01860 360 aaKnown RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 DHX9Q08211 1270 aaKnown RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 ODF2Q5BJF6 829 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 LRCH2Q5VUJ6 765 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 OTUD6BQ8N6M0 293 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 TDRD3Q9H7E2 651 aaKnown RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 PARVGQ9HBI0 331 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 SLC12A6Q9UHW9 1150 aa14.14□□□□□ -0.15
PTPN7-217ENST00000495688 NOVA2Q9UNW9 492 aaKnown RBP14.14□□□□□ -0.15
PTPN7-217ENST00000495688 TISP43B9A030 160 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 DDX3YO15523 660 aaKnown RBP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 MMP14P50281 582 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 SF3B2Q13435 895 aaKnown RBP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 CHADLQ6NUI6 762 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 KCNV1Q6PIU1 500 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 LRIG3Q6UXM1 1119 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 MAEAQ7L5Y9 396 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 SYCE1Q8N0S2 351 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 C1orf131Q8NDD1 294 aaKnown RBP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 RFFLQ8WZ73 363 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 GMCL1Q96IK5 515 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 SYT11Q9BT88 431 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 STK33Q9BYT3 514 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.13□□□□□ -0.153e-11■■■■■ 99.4
PTPN7-217ENST00000495688 TMOD4Q9NZQ9 345 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 ATP8A1Q9Y2Q0 1164 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 PPATQ06203 517 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 IFT88Q13099 833 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 PHLDB3Q6NSJ2 640 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 ZNF720Q7Z2F6 126 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 FAM178BQ8IXR5 827 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 SEPT12Q8IYM1 358 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 EIF1ADQ8N9N8 165 aaKnown RBP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 GMCL1P1Q8NEA9 526 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 ATP8B4Q8TF62 1192 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 CTNNBL1Q8WYA6 563 aaPredicted RBP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 ALG3Q92685 438 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 INTS2Q9H0H0 1204 aaKnown RBP14.13□□□□□ -0.15
PTPN7-217ENST00000495688 AGPAT3Q9NRZ7 376 aa14.13□□□□□ -0.15
PTPN7-217ENST00000495688 SCN9AQ15858 1988 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 TULP1O00294 542 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 FOXN3O00409 490 aaPredicted RBP14.12□□□□□ -0.15
PTPN7-217ENST00000495688 PSMD10O75832 226 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 KIAA0754O94854 1291 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 FAM107AO95990 144 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 GAP43P17677 238 aa14.12□□□□□ -0.15
PTPN7-217ENST00000495688 DLG4P78352 724 aa14.12□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms