RNA–Protein interactions for RNA: ENST00000493957.5

UBA3-211, Transcript of ubiquitin like modifier activating enzyme 3, humanhuman

TSL 3

Gene UBA3, Length 581 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBA3-211ENST00000493957 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 KSR1Q8IVT5 923 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 NME8Q8N427 588 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 LINC01599Q8WXQ3 324 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 TMEM143Q96AN5 459 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 POLR3CQ9BUI4 534 aaPredicted RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 IFIH1Q9BYX4 1025 aaKnown RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 ADAMTS10Q9H324 1103 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 DHX33Q9H6R0 707 aaKnown RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 TUFT1Q9NNX1 390 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 XPNPEP1Q9NQW7 623 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 NOC2LQ9Y3T9 749 aaKnown RBP13.02□□□□□ -0.33
UBA3-211ENST00000493957 SLC4A7Q9Y6M7 1214 aa13.02□□□□□ -0.33
UBA3-211ENST00000493957 ATG2AQ2TAZ0 1938 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 M0QZ92 97 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 DKC1O60832 514 aaKnown RBP eCLIP13.01□□□□□ -0.33
UBA3-211ENST00000493957 MYOGP15173 224 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 RPA1P27694 616 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 CCT6AP40227 531 aaKnown RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 GPC3P51654 580 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 POLGP54098 1239 aaPredicted RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 NLRP11P59045 1033 aaKnown RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 EMC2Q15006 297 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 FOXD4L6Q3SYB3 417 aaPredicted RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 FOXD4L3Q6VB84 417 aaPredicted RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 TSHZ1Q6ZSZ6 1077 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 Q7L0L9 218 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 KCNK18Q7Z418 384 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 SNX29Q8TEQ0 813 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 SEPT8Q92599 483 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 USP28Q96RU2 1077 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 PBX4Q9BYU1 374 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 TMX1Q9H3N1 280 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 YBX2Q9Y2T7 364 aaKnown RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 KDM3AQ9Y4C1 1321 aa13.01□□□□□ -0.33
UBA3-211ENST00000493957 COL4A4P53420 1690 aaPredicted RBP13.01□□□□□ -0.33
UBA3-211ENST00000493957 CSDE1O75534 798 aaKnown RBP13□□□□□ -0.33
UBA3-211ENST00000493957 BAIAP3O94812 1187 aa13□□□□□ -0.33
UBA3-211ENST00000493957 ARHGEF15O94989 841 aa13□□□□□ -0.33
UBA3-211ENST00000493957 ZSCAN22P10073 491 aaPredicted RBP13□□□□□ -0.33
UBA3-211ENST00000493957 ATP2A2P16615 1042 aaKnown RBP13□□□□□ -0.33
UBA3-211ENST00000493957 FGFR4P22455 802 aa13□□□□□ -0.33
UBA3-211ENST00000493957 MARCKSP29966 332 aaPredicted RBP13□□□□□ -0.33
UBA3-211ENST00000493957 SMAD3P84022 425 aaKnown RBP13□□□□□ -0.33
UBA3-211ENST00000493957 IKBKEQ14164 716 aa13□□□□□ -0.33
UBA3-211ENST00000493957 PDIA5Q14554 519 aa13□□□□□ -0.33
UBA3-211ENST00000493957 TMEM92Q6UXU6 159 aa13□□□□□ -0.33
UBA3-211ENST00000493957 FAM228AQ86W67 206 aa13□□□□□ -0.33
UBA3-211ENST00000493957 ERMNQ8TAM6 284 aa13□□□□□ -0.33
UBA3-211ENST00000493957 LRRC15Q8TF66 581 aa13□□□□□ -0.33
UBA3-211ENST00000493957 SPOCK2Q92563 424 aa13□□□□□ -0.33
UBA3-211ENST00000493957 CHAMP1Q96JM3 812 aa13□□□□□ -0.33
UBA3-211ENST00000493957 PNMA5Q96PV4 448 aa13□□□□□ -0.33
UBA3-211ENST00000493957 MAP7D2Q96T17 732 aa13□□□□□ -0.33
UBA3-211ENST00000493957 PLIN2Q99541 437 aa13□□□□□ -0.33
UBA3-211ENST00000493957 MTIF3Q9H2K0 278 aaKnown RBP13□□□□□ -0.33
UBA3-211ENST00000493957 ERVK-5Q9HDB9 667 aa13□□□□□ -0.33
UBA3-211ENST00000493957 ANKEF1Q9NU02 776 aa13□□□□□ -0.33
UBA3-211ENST00000493957 DDX19AQ9NUU7 478 aaKnown RBP13□□□□□ -0.33
UBA3-211ENST00000493957 SUCLA2Q9P2R7 463 aaPredicted RBP13□□□□□ -0.33
UBA3-211ENST00000493957 PADI3Q9ULW8 664 aa13□□□□□ -0.33
UBA3-211ENST00000493957 ZDHHC9Q9Y397 364 aa13□□□□□ -0.33
UBA3-211ENST00000493957 CHD7Q9P2D1 2997 aa13□□□□□ -0.33
UBA3-211ENST00000493957 HSFX4A0A1B0GTS1 333 aaPredicted RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 ABHD14A-ACY1A0A1B0GW23 586 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 HSFX3A0A1B0GWH4 333 aaPredicted RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 E9PMD0 336 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 MGEA5O60502 916 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 USO1O60763 962 aaKnown RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 F13A1P00488 732 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 RPLP2P05387 115 aaKnown RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 TMOD1P28289 359 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 RFC5P40937 340 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 CRYBB1P53674 252 aaPredicted RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 PAK2Q13177 524 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 GRB10Q13322 594 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 ZRSR1Q15695 479 aaKnown RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 SPECC1Q5M775 1068 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 ARL6IP4Q66PJ3 421 aaKnown RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 HAUS3Q68CZ6 603 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 FAM117BQ6P1L5 589 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 OTUD6AQ7L8S5 288 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 RTN4RL1Q86UN2 441 aaPredicted RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 RHPN2Q8IUC4 686 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 CLIC6Q96NY7 704 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 MTRQ99707 1265 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 GPRC5CQ9NQ84 441 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 TFIP11Q9UBB9 837 aaKnown RBP12.99□□□□□ -0.33
UBA3-211ENST00000493957 KIAA1024Q9UPX6 916 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 TRIP11Q15643 1979 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 RALGAPA2Q2PPJ7 1873 aa12.99□□□□□ -0.33
UBA3-211ENST00000493957 A0A087WZ62 844 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 LCHNA4D1U4 455 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 RPS6KA5O75582 802 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 DNAJB2P25686 324 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 KCNJ6P48051 423 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 NFX1Q12986 1120 aaKnown RBP12.98□□□□□ -0.33
UBA3-211ENST00000493957 USP49Q70CQ1 688 aa12.98□□□□□ -0.33
UBA3-211ENST00000493957 MAEAQ7L5Y9 396 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms