RNA–Protein interactions for RNA: ENST00000488897.5

COL16A1-215, Transcript of collagen type XVI alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL16A1, Length 2,423 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL16A1-215ENST00000488897 DUSP10Q9Y6W6 482 aa20.09■□□□□ 0.81
COL16A1-215ENST00000488897 STRNO43815 780 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 ARP10275 920 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 PRLRP16471 622 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 GRB10Q13322 594 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 PRR16Q569H4 304 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 COG1Q8WTW3 980 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 LARP4BQ92615 738 aaKnown RBP20.08■□□□□ 0.81
COL16A1-215ENST00000488897 USP6NLQ92738 828 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 BLOC1S4Q9NUP1 217 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 SIK3Q9Y2K2 1263 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 PFASO15067 1338 aa20.08■□□□□ 0.81
COL16A1-215ENST00000488897 SNAI1O95863 264 aaPredicted RBP20.08■□□□□ 0.8
COL16A1-215ENST00000488897 LRRC63Q05C16 580 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 PDIA5Q14554 519 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 ARMCX2Q7L311 632 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 NSUN6Q8TEA1 469 aaKnown RBP20.08■□□□□ 0.8
COL16A1-215ENST00000488897 IFIH1Q9BYX4 1025 aaKnown RBP20.08■□□□□ 0.8
COL16A1-215ENST00000488897 HPCAL4Q9UM19 191 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 PCDHA13Q9Y5I0 950 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 PTCH2Q9Y6C5 1203 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 PLXNA1Q9UIW2 1896 aa20.08■□□□□ 0.8
COL16A1-215ENST00000488897 MYMKA6NI61 221 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 SLC15A5A6NIM6 579 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 ZNF263O14978 683 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 LCA5LO95447 670 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 ZNF76P36508 570 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 SP4Q02446 784 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 ITIH3Q06033 890 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 CCNI2Q6ZMN8 369 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-215ENST00000488897 SNX12Q9UMY4 172 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.07■□□□□ 0.8
COL16A1-215ENST00000488897 DDX39AO00148 427 aaKnown RBP20.07■□□□□ 0.8
COL16A1-215ENST00000488897 ADCY6O43306 1168 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 ATP9AO75110 1047 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 PSMD2Q13200 908 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 CRYGNQ8WXF5 182 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 RUBCNQ92622 972 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 COPS5Q92905 334 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 HPS3Q969F9 1004 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 DEF6Q9H4E7 631 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 ARHGAP20Q9P2F6 1191 aa20.07■□□□□ 0.8
COL16A1-215ENST00000488897 PDE2AO00408 941 aaPredicted RBP20.06■□□□□ 0.8
COL16A1-215ENST00000488897 ZNF185O15231 689 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 PHACTR2O75167 634 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 SP2Q02086 613 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 FOXR2Q6PJQ5 311 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 MMGT1Q8N4V1 131 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 PNMA5Q96PV4 448 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 EDEM3Q9BZQ6 932 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 SRRDQ9UH36 339 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 RNF40O75150 1001 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 SYF2O95926 243 aaKnown RBP20.06■□□□□ 0.8
COL16A1-215ENST00000488897 SREBF1P36956 1147 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 KIF11P52732 1056 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 TRAF1Q13077 416 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 ZNF572Q7Z3I7 529 aaPredicted RBP20.06■□□□□ 0.8
COL16A1-215ENST00000488897 VSIG10LQ86VR7 867 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 MMRN2Q9H8L6 949 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 FAM204AQ9H8W3 233 aa20.06■□□□□ 0.8
COL16A1-215ENST00000488897 ARIH2O95376 493 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 PLEKP08567 350 aaPredicted RBP20.05■□□□□ 0.8
COL16A1-215ENST00000488897 LY6KQ17RY6 165 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 CREG2Q8IUH2 290 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 RAD54LQ92698 747 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 ALS2CR12Q96Q35 445 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 TSG101Q99816 390 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 TINF2Q9BSI4 451 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 FAM207AQ9NSI2 230 aaPredicted RBP20.05■□□□□ 0.8
COL16A1-215ENST00000488897 RPTORQ8N122 1335 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 AKR1B10O60218 316 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 EIF4A3P38919 411 aaKnown RBP20.05■□□□□ 0.8
COL16A1-215ENST00000488897 GHRHRQ02643 423 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 KRT79Q5XKE5 535 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 TRMT1LQ7Z2T5 733 aaKnown RBP20.05■□□□□ 0.8
COL16A1-215ENST00000488897 RAET1EQ8TD07 263 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 PPP1R13LQ8WUF5 828 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 CRACR2AQ9BSW2 395 aa20.05■□□□□ 0.8
COL16A1-215ENST00000488897 RBBP6Q7Z6E9 1792 aaKnown RBP20.05■□□□□ 0.8
COL16A1-215ENST00000488897 A0A0U1RQG5 324 aaPredicted RBP20.04■□□□□ 0.8
COL16A1-215ENST00000488897 NKRFO15226 690 aaKnown RBP eCLIP20.04■□□□□ 0.8
COL16A1-215ENST00000488897 ADCYAP1R1P41586 468 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 AP3B2Q13367 1082 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 DYMQ7RTS9 669 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 AFAP1L1Q8TED9 768 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 CDKN2AIPQ9NXV6 580 aaPredicted RBP20.04■□□□□ 0.8
COL16A1-215ENST00000488897 DOCK5Q9H7D0 1870 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 TCP1P17987 556 aaKnown RBP20.04■□□□□ 0.8
COL16A1-215ENST00000488897 RGS2P41220 211 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 TRPV1Q8NER1 839 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 ZBTB9Q96C00 473 aa20.04■□□□□ 0.8
COL16A1-215ENST00000488897 ADCY3O60266 1144 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 PRPF6O94906 941 aaKnown RBP20.03■□□□□ 0.8
COL16A1-215ENST00000488897 CNGA1P29973 690 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 C2orf54Q08AI8 447 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 RRAGAQ7L523 313 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 LENG9Q96B70 501 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 SELENOOQ9BVL4 669 aa20.03■□□□□ 0.8
COL16A1-215ENST00000488897 DDX25Q9UHL0 483 aaKnown RBP20.03■□□□□ 0.8
COL16A1-215ENST00000488897 IGLV3-22A0A075B6J6 115 aa20.03■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms