RNA–Protein interactions for RNA: ENST00000452852.1

LINC00393-202, long intergenic non-protein coding RNA 393, humanhuman

TSL 3 BASIC

Gene LINC00393, Length 485 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00393-202ENST00000452852 TRIM8Q9BZR9 551 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 CD244Q9BZW8 370 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 CATSPERZQ9NTU4 200 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 RBPJLQ9UBG7 517 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 NUB1Q9Y5A7 615 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 PRDM15P57071 1507 aaPredicted RBP5.67□□□□□ -1.5
LINC00393-202ENST00000452852 SYNMO15061 1565 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 KANK1Q14678 1352 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.67□□□□□ -1.5
LINC00393-202ENST00000452852 KIF15Q9NS87 1388 aa5.67□□□□□ -1.5
LINC00393-202ENST00000452852 NPHP4O75161 1426 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 A0A0G2JLL6 359 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 GPR39O43194 453 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 TOM1O60784 492 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 EFCAB14O75071 495 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 SCGB1D2O95969 90 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 POU3F2P20265 443 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 RPL13P26373 211 aaKnown RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 RAB27AP51159 221 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 SKOR2Q2VWA4 1001 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 CFAP100Q494V2 611 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 PAN2Q504Q3 1202 aaKnown RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 PRR31Q5SQ13 230 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 CDCA2Q69YH5 1023 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 TMC5Q6UXY8 1006 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 ARHGAP36Q6ZRI8 547 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 KCTD1Q719H9 257 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 C16orf59Q7L2K0 433 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 C14orf80Q86SX3 495 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 PROSER1Q86XN7 944 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 COG1Q8WTW3 980 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 MAGEB10Q96LZ2 347 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 ZSWIM3Q96MP5 696 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 PDGFDQ9GZP0 370 aaPredicted RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 GEMIN8Q9NWZ8 242 aaKnown RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 HSPBP1Q9NZL4 362 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 CBLCQ9ULV8 474 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 VWDEQ8N2E2 1590 aa5.66□□□□□ -1.5
LINC00393-202ENST00000452852 KDM5AP29375 1690 aaKnown RBP5.66□□□□□ -1.5
LINC00393-202ENST00000452852 DAPK1P53355 1430 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 MED14O60244 1454 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 TCRBV16S1A1N1A0A5B0 115 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 AMY2AP04746 511 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 PDE6AP16499 860 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 FAHP16930 419 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 AMY2BP19961 511 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 IGFALSP35858 605 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 DNM2P50570 870 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 NEK2P51955 445 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 EPHA5P54756 1037 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 ST5P78524 1137 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 TMPRSS15P98073 1019 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 RTP5Q14D33 572 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 DHCR24Q15392 516 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 GPR19Q15760 415 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 MAP9Q49MG5 647 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 NT5DC1Q5TFE4 455 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 OSTM1Q86WC4 334 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 ZC3H7AQ8IWR0 971 aaKnown RBP5.65□□□□□ -1.5
LINC00393-202ENST00000452852 CCAR1Q8IX12 1150 aaKnown RBP5.65□□□□□ -1.5
LINC00393-202ENST00000452852 EXOC8Q8IYI6 725 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 USP7Q93009 1102 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 TMEM209Q96SK2 561 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 MYH16Q9H6N6 1097 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 RRP7BPQ9NSQ0 103 aa5.65□□□□□ -1.5
LINC00393-202ENST00000452852 PIK3C2BO00750 1634 aa5.65□□□□□ -1.51
LINC00393-202ENST00000452852 ANKRD30AQ9BXX3 1397 aa5.65□□□□□ -1.51
LINC00393-202ENST00000452852 STRCP1A6NGW2 1772 aa5.65□□□□□ -1.51
LINC00393-202ENST00000452852 ABCC5O15440 1437 aa5.65□□□□□ -1.51
LINC00393-202ENST00000452852 FGD6Q6ZV73 1430 aa5.65□□□□□ -1.51
LINC00393-202ENST00000452852 CCDC66A2RUB6 948 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 ACOT7O00154 380 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 NEMP1O14524 444 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 GSTA4O15217 222 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 AKAP10O43572 662 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 NPTXRO95502 500 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 CKMP06732 381 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 KRT15P19012 456 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 GNALP38405 381 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 JAM2P57087 298 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 RHBDL3P58872 404 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 KRTAP1-1Q07627 177 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 CRY1Q16526 586 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 PIK3R6Q5UE93 754 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 RNF219Q5W0B1 726 aaPredicted RBP5.64□□□□□ -1.51
LINC00393-202ENST00000452852 UBE2R2Q712K3 238 aaPredicted RBP5.64□□□□□ -1.51
LINC00393-202ENST00000452852 NECAB2Q7Z6G3 386 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 ZNF761Q86XN6 746 aaPredicted RBP5.64□□□□□ -1.51
LINC00393-202ENST00000452852 PTRH1Q86Y79 214 aaKnown RBP5.64□□□□□ -1.51
LINC00393-202ENST00000452852 ADAMTS17Q8TE56 1095 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 CLIC6Q96NY7 704 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 ADAM7Q9H2U9 754 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 AASDHPPTQ9NRN7 309 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 ZIM2Q9NZV7 527 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 CROTQ9UKG9 612 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 SRPK3Q9UPE1 567 aa5.64□□□□□ -1.51
LINC00393-202ENST00000452852 SCAF11Q99590 1463 aaKnown RBP5.64□□□□□ -1.51
LINC00393-202ENST00000452852 ZNF561-AS1K7EIQ3 104 aa5.63□□□□□ -1.51
LINC00393-202ENST00000452852 DDX3XO00571 662 aaKnown RBP eCLIP5.63□□□□□ -1.51
LINC00393-202ENST00000452852 MAN2B1O00754 1011 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms