RNA–Protein interactions for RNA: ENST00000448404.5

SF1-211, Transcript of splicing factor 1, humanhuman

TSL 1 (best)

Gene SF1, Length 2,778 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF1-211ENST00000448404 FSTL1Q12841 308 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 NAB2Q15742 525 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 B3GNT9Q6UX72 402 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 PPP4R3CPQ6ZMV5 832 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 ADAT2Q7Z6V5 191 aaKnown RBP16.16■□□□□ 0.18
SF1-211ENST00000448404 FAM83AQ86UY5 434 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 FAM160B2Q86V87 743 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 SAAL1Q96ER3 474 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 GBP3Q9H0R5 595 aa16.16■□□□□ 0.18
SF1-211ENST00000448404 CNOT7Q9UIV1 285 aaKnown RBP16.16■□□□□ 0.18
SF1-211ENST00000448404 PJA2O43164 708 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 LMAN1P49257 510 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 FMO5P49326 533 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 SF3B2Q13435 895 aaKnown RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 DRAP1Q14919 205 aaPredicted RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 LLGL1Q15334 1064 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 LNX1Q8TBB1 728 aaPredicted RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 AP1M1Q9BXS5 423 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 RABEP2Q9H5N1 569 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 AGO4Q9HCK5 861 aaKnown RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 DNAJC12Q9UKB3 198 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 ADAM21Q9UKJ8 722 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 KCNK3O14649 394 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 GLI1P08151 1106 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 RPL13P26373 211 aaKnown RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 PSMC2P35998 433 aaKnown RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 USP8P40818 1118 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 PPP3CAQ08209 521 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 TUBB2AQ13885 445 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 BMT2Q1RMZ1 405 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 PHLDB3Q6NSJ2 640 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 SLC20A1Q8WUM9 679 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 HNRNPLLQ8WVV9 542 aaKnown RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 CCDC127Q96BQ5 260 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 WRNIP1Q96S55 665 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 TUBB2BQ9BVA1 445 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 SELENOOQ9BVL4 669 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 DNAH12Q6ZR08 3092 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 TBC1D12O60347 775 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 COPB2P35606 906 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 RARRES1P49788 294 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 PGM5Q15124 567 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 FAM102BQ5T8I3 360 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 NAA35Q5VZE5 725 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 SND1Q7KZF4 910 aaKnown RBP eCLIP16.15■□□□□ 0.18
SF1-211ENST00000448404 IFT81Q8WYA0 676 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 KRT12Q99456 494 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 SLC38A10Q9HBR0 1119 aa16.15■□□□□ 0.18
SF1-211ENST00000448404 TOPORSQ9NS56 1045 aaPredicted RBP16.15■□□□□ 0.18
SF1-211ENST00000448404 CKAP4Q07065 602 aaKnown RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 ANGEL2Q5VTE6 544 aaKnown RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 HS2ST1Q7LGA3 356 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 CTDP1Q9Y5B0 961 aaPredicted RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 FAM153BP0C7A2 387 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 HMGB2P26583 209 aaKnown RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 YWHABP31946 246 aaKnown RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 BAG6P46379 1132 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 SLC20A2Q08357 652 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 FAM153CQ494X1 144 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 WDR93Q6P2C0 686 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 CCNI2Q6ZMN8 369 aaPredicted RBP16.14■□□□□ 0.17
SF1-211ENST00000448404 ARHGEF19Q8IW93 802 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 OLIG1Q8TAK6 271 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 TRPM4Q8TD43 1214 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 CNKSR2Q8WXI2 1034 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 FAM153AQ9UHL3 310 aa16.14■□□□□ 0.17
SF1-211ENST00000448404 EMSYQ7Z589 1322 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 ZNF541Q9H0D2 1346 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 CCDC169A6NNP5 214 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 FOXN3O00409 490 aaPredicted RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 GGCXP38435 758 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 CPNE8Q86YQ8 564 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 CCDC43Q96MW1 224 aaKnown RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 GPR88Q9GZN0 384 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 R3HDMLQ9H3Y0 253 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 BRCA2P51587 3418 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 ANKRD63C9JTQ0 380 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 POTEB2H3BUK9 544 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 GAP43P17677 238 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 CARSP49589 748 aaKnown RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 GUCY2FP51841 1108 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 MKRN4PQ13434 485 aaPredicted RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 XKR9Q5GH70 373 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 MCTP2Q6DN12 878 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 RNF207Q6ZRF8 634 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 TSEN2Q8NCE0 465 aaKnown RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 BSNDQ8WZ55 320 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 INTS2Q9H0H0 1204 aaKnown RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 FEZ2Q9UHY8 353 aaPredicted RBP16.13■□□□□ 0.17
SF1-211ENST00000448404 HPCAL4Q9UM19 191 aa16.13■□□□□ 0.17
SF1-211ENST00000448404 F8VZ95 297 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 ZNF131P52739 623 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 JAM2P57087 298 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 DNAJC21Q5F1R6 531 aaKnown RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 ARHGEF16Q5VV41 709 aa16.12■□□□□ 0.17
SF1-211ENST00000448404 LMBRD2Q68DH5 695 aaPredicted RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 SNRNP48Q6IEG0 339 aaKnown RBP16.12■□□□□ 0.17
SF1-211ENST00000448404 DDX42Q86XP3 938 aaKnown RBP eCLIP16.12■□□□□ 0.17
SF1-211ENST00000448404 CBWD2Q8IUF1 395 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms