RNA–Protein interactions for RNA: ENST00000368292.10

ECHDC1-204, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 854 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-204ENST00000368292 SCN4AP35499 1836 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 DLEC1Q9Y238 1755 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 DLX3O60479 287 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 PPP1R11O60927 126 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 SCG5P05408 212 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 COL6A1P12109 1028 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 SDHBP21912 280 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 CHRNA5P30532 468 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 KCTD2Q14681 263 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 FNDC3BQ53EP0 1204 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 HSP90AB3PQ58FF7 597 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 MBLAC2Q68D91 279 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 ANKRD23Q86SG2 305 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 LDHDQ86WU2 507 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 CPNE8Q86YQ8 564 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 NIM1KQ8IY84 436 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 TTC30BQ8N4P2 665 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 PAF1Q8N7H5 531 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 PRPF38AQ8NAV1 312 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 KREMEN2Q8NCW0 462 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 SVIPQ8NHG7 77 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 NPLOC4Q8TAT6 608 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 FRS2Q8WU20 508 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 PPM1EQ8WY54 764 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 MFSD3Q96ES6 412 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 MYCBPQ99417 103 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 MPHOSPH6Q99547 160 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 IER2Q9BTL4 223 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 NSUN3Q9H649 340 aaKnown RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 ZNF552Q9H707 407 aaPredicted RBP6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 CLEC1BQ9P126 229 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 LTN1O94822 1766 aa6.06□□□□□ -1.44
ECHDC1-204ENST00000368292 ITGB4P16144 1822 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 A0A087X0B3 334 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 IRS4O14654 1257 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 RRP9O43818 475 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 PLIN1O60240 522 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 LDHCP07864 332 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 C6orf222P0C671 652 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 PLS3P13797 630 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 PAMP19021 973 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 HOXC12P31275 282 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 TXKP42681 527 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 ERVFRD-1P60508 538 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 SUMO1P63165 101 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 CYP4F8P98187 520 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 NEXNQ0ZGT2 675 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 ODR4Q5SWX8 454 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 ZNF648Q5T619 568 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 DENND5AQ6IQ26 1287 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 KRT26Q7Z3Y9 468 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 RPAINQ86UA6 219 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 NBPF5PQ86XG9 351 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 THNSL2Q86YJ6 484 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 JAMLQ86YT9 394 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 NUP43Q8NFH3 380 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 CDK19Q9BWU1 502 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 MRPL4Q9BYD3 311 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 TMEFF2Q9UIK5 374 aaPredicted RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 NOL7Q9UMY1 257 aaKnown RBP6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 SCN11AQ9UI33 1791 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 FER1L6Q2WGJ9 1857 aa6.05□□□□□ -1.44
ECHDC1-204ENST00000368292 UNC80Q8N2C7 3258 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 RGPD2P0DJD1 1756 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 NPHP3-ACAD11A0A0J9YXS1 232 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 IFRD1O00458 451 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 DDNO94850 711 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 FARP2O94887 1054 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 MYCLP1P12525 358 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 SDSP20132 328 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 POU3F3P20264 500 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 TERF1P54274 439 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 GFRA1P56159 465 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 GRM1Q13255 1194 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 LAPTM5Q13571 262 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 NTRK3Q16288 839 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 INF2Q27J81 1249 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 PRSS53Q2L4Q9 553 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 GJC2Q5T442 439 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 ADGRF1Q5T601 910 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 CC2D1AQ6P1N0 951 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 KSR1Q8IVT5 923 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 CCDC103Q8IW40 242 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 C1orf159Q96HA4 380 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 IPO9Q96P70 1041 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 CEP89Q96ST8 783 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 MMP19Q99542 508 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 KRTAP9-2Q9BYQ4 174 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 EPB41L4BQ9H329 900 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 TAF1DQ9H5J8 278 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 TNFRSF12AQ9NP84 129 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 DCP1AQ9NPI6 582 aaPredicted RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 TYW1Q9NV66 732 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 FBLN5Q9UBX5 448 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 ABT1Q9ULW3 272 aaKnown RBP6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 TRPM7Q96QT4 1865 aa6.04□□□□□ -1.44
ECHDC1-204ENST00000368292 MYOCOSA0A1B0GUC4 107 aa6.03□□□□□ -1.44
ECHDC1-204ENST00000368292 BLACEA4D250 179 aa6.03□□□□□ -1.44
ECHDC1-204ENST00000368292 C7orf72A4D263 438 aa6.03□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms