RNA–Protein interactions for RNA: ENST00000326195.12

ABCF1-201, Transcript of ATP binding cassette subfamily F member 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene ABCF1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF1-201ENST00000326195 MANSC4A6NHS7 340 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 UPP2O95045 317 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 SLC10A3P09131 477 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 FAM153BP0C7A2 387 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 FCER1AP12319 257 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 ELNP15502 786 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 CCL14Q16627 93 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 FAM153CQ494X1 144 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC122Q5T0U0 273 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 CDKAL1Q5VV42 579 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 CYP26C1Q6V0L0 522 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 FBXO16Q8IX29 292 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 PSMB7Q99436 277 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 ZMYND12Q9H0C1 365 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 ZFYVE28Q9HCC9 887 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 FAM153AQ9UHL3 310 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 MYH4Q9Y623 1939 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 EPB41P11171 864 aaKnown RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 ADORA2AP29274 412 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 TRAPPC10P48553 1259 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 CDR1P51861 262 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 AMPD3Q01432 767 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 CUL4BQ13620 913 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 MOGSQ13724 837 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 PPANQ9NQ55 473 aaKnown RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 DDX25Q9UHL0 483 aaKnown RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 TELO2Q9Y4R8 837 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 A0A1B0GUA9 196 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 GBP2P32456 591 aaPredicted RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 NOVP48745 357 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 COPB1P53618 953 aaKnown RBP11.26□□□□□ -0.61
ABCF1-201ENST00000326195 ARMC2Q8NEN0 867 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 MICAL1Q8TDZ2 1067 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 COPS5Q92905 334 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 RIC8AQ9NPQ8 531 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 PDGFCQ9NRA1 345 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 SIPA1L1O43166 1804 aa11.26□□□□□ -0.61
ABCF1-201ENST00000326195 A0A087X0B3 334 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 E7EVH7 732 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 PPP1R37O75864 691 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 ARP10275 920 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 PDE4DQ08499 809 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 SPA17Q15506 151 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CSGALNACT2Q8N6G5 542 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CD99L2Q8TCZ2 262 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 LMBR1Q8WVP7 490 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CLEC4DQ8WXI8 215 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 STAMBPL1Q96FJ0 436 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 JADE2Q9NQC1 790 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 ZSCAN5CA6NGD5 496 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-201ENST00000326195 TMCO5BA8MYB1 307 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 FAM86B1E9PN63 330 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 OPA1O60313 960 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 FAM86B2P0C5J1 330 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 ZBTB48P10074 688 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CXCR5P32302 372 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 LONP1P36776 959 aaKnown RBP11.25□□□□□ -0.61
ABCF1-201ENST00000326195 C1QTNF8P60827 252 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 KRT31Q15323 416 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 BTNL9Q6UXG8 535 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CREG2Q8IUH2 290 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 ZNF668Q96K58 619 aaPredicted RBP11.25□□□□□ -0.61
ABCF1-201ENST00000326195 ATP6V0A4Q9HBG4 840 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CREBZFQ9NS37 354 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 GDAQ9Y2T3 454 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 DOCK3Q8IZD9 2030 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 NR3C2P08235 984 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 EZRP15311 586 aaKnown RBP11.25□□□□□ -0.61
ABCF1-201ENST00000326195 ADCY2Q08462 1091 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 SREBF2Q12772 1141 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 TRIM14Q14142 442 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CALCRLQ16602 461 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 KRT25Q7Z3Z0 450 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 PIK3R5Q8WYR1 880 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 CCDC51Q96ER9 411 aa11.25□□□□□ -0.61
ABCF1-201ENST00000326195 FAM155AB1AL88 458 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 MARK3P27448 753 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 CCNA1P78396 465 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 ATP2C1P98194 919 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 CACNB1Q02641 598 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 SF3A3Q12874 501 aaKnown RBP eCLIP11.24□□□□□ -0.611e-6■■■■□ 22.6
ABCF1-201ENST00000326195 TRADDQ15628 312 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 TMEM266Q2M3C6 531 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 CDCA2Q69YH5 1023 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 WDR59Q6PJI9 974 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 ELOA2Q8IYF1 753 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 CYFIP2Q96F07 1278 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 CYP39A1Q9NYL5 469 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 RABGAP1Q9Y3P9 1069 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 ESYT3A0FGR9 886 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 MACROD2A1Z1Q3 448 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 CYLC1P35663 651 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 ZKSCAN8Q15776 578 aaPredicted RBP11.24□□□□□ -0.61
ABCF1-201ENST00000326195 SH3D19Q5HYK7 790 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 THEMIS2Q5TEJ8 643 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 KDM7AQ6ZMT4 941 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 FAM114A1Q8IWE2 563 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 SPATA20Q8TB22 786 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 RAB34Q9BZG1 259 aa11.24□□□□□ -0.61
ABCF1-201ENST00000326195 L3MBTL1Q9Y468 752 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms