RNA–Protein interactions for RNA: ENST00000267970.8

TSPAN3-201, Transcript of tetraspanin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPAN3, Length 6,467 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-201ENST00000267970 ETNK1Q9HBU6 452 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 FAM135BQ49AJ0 1406 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 PARP9Q8IXQ6 854 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 ZNF280CQ8ND82 737 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 MXD4Q14582 209 aaPredicted RBP17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 UBE3CQ15386 1083 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 LRRC8EQ6NSJ5 796 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 ZBED8Q8IZ13 594 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 GIPC2Q8TF65 315 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 C11orf70Q9BRQ4 267 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 SLC5A4Q9NY91 659 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 SLC12A6Q9UHW9 1150 aa17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 NOC2LQ9Y3T9 749 aaKnown RBP17.95■□□□□ 0.46
TSPAN3-201ENST00000267970 E9PMD0 336 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 SNX2O60749 519 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 GPS1Q13098 491 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 TMEM270Q6UE05 265 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 BTBD6Q96KE9 485 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 MYL1P05976 194 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 DCAF4L1Q3SXM0 396 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 ICE2Q659A1 982 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 NUP85Q9BW27 656 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 AURKCQ9UQB9 309 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 PCCAP05165 728 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 FSD1LQ9BXM9 530 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 STX18Q9P2W9 335 aaKnown RBP17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 ATP1A1P05023 1023 aaKnown RBP17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 NEK2P51955 445 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 TAF1BQ53T94 588 aaPredicted RBP17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 TMEM206Q9H813 350 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 KANSL2Q9H9L4 492 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 BABAM1Q9NWV8 329 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 NEMP1O14524 444 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 BMP3P12645 472 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 GFAPP14136 432 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 VCAM1P19320 739 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 KDSRQ06136 332 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 SH2D3CQ8N5H7 860 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 FAM213AQ9BRX8 229 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 TMEM60Q9H2L4 133 aa17.94■□□□□ 0.46
TSPAN3-201ENST00000267970 LAD1O00515 517 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 ENO1P06733 434 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 ZSCAN20P17040 1043 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 CUL3Q13618 768 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 ACBD5Q5T8D3 534 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 ADAM22Q9P0K1 906 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 ABCA10Q8WWZ4 1543 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 HAUS5O94927 633 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 TJP3O95049 919 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 HSPA6P17066 643 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 COPS2P61201 443 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 NFX1Q12986 1120 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 NCAPHQ15003 741 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 CCDC92Q53HC0 331 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 SFR1Q86XK3 245 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 DDIASQ8IXT1 998 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 AK8Q96MA6 479 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 TRIM15Q9C019 465 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 CUEDC2Q9H467 287 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 SLITRK6Q9H5Y7 841 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 SMARCAL1Q9NZC9 954 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 FBXO2Q9UK22 296 aaPredicted RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 GMNCA6NCL1 334 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 ENO4A6NNW6 628 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 PDIA2Q13087 525 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 TNFAIP1Q13829 316 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 TUBB6Q9BUF5 446 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 SUN2Q9UH99 717 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 CTIFO43310 598 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 CUL1Q13616 776 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 C11orf74Q86VG3 221 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 WDR75Q8IWA0 830 aaKnown RBP17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 LRRC37BQ96QE4 947 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 FAM118BQ9BPY3 351 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 NEDD4P46934 1319 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 MAP3K15Q6ZN16 1313 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 SLC16A4O15374 487 aa17.93■□□□□ 0.46
TSPAN3-201ENST00000267970 BLMP54132 1417 aaPredicted RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ZBTB1Q9Y2K1 713 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 BRAFP15056 766 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 PPP2R2AP63151 447 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 COBLL1Q53SF7 1204 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 SCN4BQ8IWT1 228 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 HPS3Q969F9 1004 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 OSBPL9Q96SU4 736 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 MMTAG2Q9BU76 263 aaKnown RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 B4GALNT2Q8NHY0 566 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 MAGEF1Q9HAY2 307 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ARHGEF10O15013 1369 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 NPHP3-ACAD11A0A0J9YXS1 232 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 USP17L5A8MUK1 530 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 PJA2O43164 708 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 FOSP01100 380 aaPredicted RBP17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 NBPF20Q3BBV1 942 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 CYB5R4Q7L1T6 521 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.92■□□□□ 0.462e-6■■■■■ 54.9
TSPAN3-201ENST00000267970 RAPGEF6Q8TEU7 1601 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 ABCB11O95342 1321 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 TAC1P20366 129 aa17.92■□□□□ 0.46
TSPAN3-201ENST00000267970 LMBRD2Q68DH5 695 aaPredicted RBP17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms