RNA–Protein interactions for RNA: ENST00000233242.5

APOB-201, Transcript of apolipoprotein B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene APOB, Length 14,121 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOB-201ENST00000233242 EPHB1P54762 984 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 CALN1Q9BXU9 219 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 RANBP17Q9H2T7 1088 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 TRABDQ9H4I3 376 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 MLXIPQ9HAP2 919 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 NOD2Q9HC29 1040 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ESYT3A0FGR9 886 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 MRPL28Q13084 256 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 SIRT2Q8IXJ6 389 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 GSPT2Q8IYD1 628 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 GUF1Q8N442 669 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 PI4K2BQ8TCG2 481 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 GLG1Q92896 1179 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ZNF496Q96IT1 587 aaPredicted RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 LGR6Q9HBX8 967 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 LRRIQ3A6PVS8 624 aaPredicted RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 O00370 1275 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 LAMB3Q13751 1172 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 SLFN12LQ6IEE8 588 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 CMTR1Q8N1G2 835 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 DDX28Q9NUL7 540 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 CYB5D1Q6P9G0 228 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TEKT4Q8WW24 435 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ANKRD36BP1Q96IX9 119 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 KDM4CQ9H3R0 1056 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TOB2Q14106 344 aaPredicted RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 EFTUD2Q15029 972 aaKnown RBP eCLIP8.76□□□□□ -1.014e-10■■■■■ 28.3
APOB-201ENST00000233242 MMS19Q96T76 1030 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 VCPKMTQ9H867 229 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 M0QZ92 97 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 ADD2P35612 726 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TMTC4Q5T4D3 741 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 LONP2Q86WA8 852 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 FAF2Q96CS3 445 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 LARGE1O95461 756 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 AARSP49588 968 aaKnown RBP eCLIP8.76□□□□□ -1.01
APOB-201ENST00000233242 DCLK2Q8N568 766 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 TBCKQ8TEA7 893 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 SUCLA2Q9P2R7 463 aaPredicted RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 KIAA0556O60303 1618 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 hCG_2014768A0A024R1R8 64 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 PLEKHG3A1L390 1219 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 DNAJC6O75061 913 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 CHN1P15882 459 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 WDR93Q6P2C0 686 aa8.76□□□□□ -1.01
APOB-201ENST00000233242 LIMA1Q9UHB6 759 aaKnown RBP8.76□□□□□ -1.01
APOB-201ENST00000233242 KRT16P08779 473 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 IFNA8P32881 189 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 FAM160B1Q5W0V3 765 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 C16orf89Q6UX73 402 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 FAM210AQ96ND0 272 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 JAG2Q9Y219 1238 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 PARP3Q9Y6F1 533 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 PMLP29590 882 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 S100A5P33763 92 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 PPARGP37231 505 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 TRADDQ15628 312 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 ARHGAP27Q6ZUM4 889 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SETD3Q86TU7 594 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 TAB3Q8N5C8 712 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 SPAG6O75602 509 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SERPINB1P30740 379 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 CTCFP49711 727 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 DACH2Q96NX9 599 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 UIMC1Q96RL1 719 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SLC38A10Q9HBR0 1119 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 KRT7P08729 469 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 CDH2P19022 906 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 GFPT1Q06210 699 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 DDX47Q9H0S4 455 aaKnown RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 DDX56Q9NY93 547 aaKnown RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 ADCY3O60266 1144 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 TMEM259Q4ZIN3 620 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 ARHGEF16Q5VV41 709 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SLC26A7Q8TE54 656 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 NGLY1Q96IV0 654 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 BRIP1Q9BX63 1249 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 DNAJC17Q9NVM6 304 aaKnown RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 ZHX2Q9Y6X8 837 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 HNRNPCL2B2RXH8 293 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 COBLO75128 1261 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 PDE8BO95263 885 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 EP400NLQ6ZTU2 488 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 POLE3Q9NRF9 147 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SLC26A4O43511 780 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 NR3C1P04150 777 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 SLC1A1P43005 524 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 POLGP54098 1239 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 LRRC1Q9BTT6 524 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 DLGAP2Q9P1A6 1054 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 PSMA2P25787 234 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 RPS8P62241 208 aaKnown RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 DSG1Q02413 1049 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 ITKQ08881 620 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 ATL2Q8NHH9 583 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 NUP85Q9BW27 656 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 ZNF219Q9P2Y4 722 aaPredicted RBP8.75□□□□□ -1.01
APOB-201ENST00000233242 IGF2BP3O00425 579 aaKnown RBP eCLIP8.75□□□□□ -1.014e-18■■■■■ 29.5
APOB-201ENST00000233242 MED10Q9BTT4 135 aa8.75□□□□□ -1.01
APOB-201ENST00000233242 CCDC87Q9NVE4 849 aa8.75□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms