RNA–Protein interactions for RNA: YPL174C

NIP100, Transcript of Large subunit of the dynactin complex, yeastyeast

Gene NIP100, Length 2,607 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
NIP100YPL174C PRP3Q03338 469 aaPredicted RBP1.09□□□□□ -2.24
NIP100YPL174C UTP15Q04305 513 aaKnown RBP1.09□□□□□ -2.24
NIP100YPL174C RPL12AP0CX53 165 aaKnown RBP1.08□□□□□ -2.24
NIP100YPL174C RPL12BP0CX54 165 aa1.08□□□□□ -2.24
NIP100YPL174C UNG1P12887 359 aa1.08□□□□□ -2.24
NIP100YPL174C FHL1P39521 936 aa1.08□□□□□ -2.24
NIP100YPL174C YNL320WP42840 284 aa1.08□□□□□ -2.24
NIP100YPL174C EPL1P43572 832 aa1.08□□□□□ -2.24
NIP100YPL174C PGU1P47180 361 aa1.08□□□□□ -2.24
NIP100YPL174C PMT5P52867 743 aa1.08□□□□□ -2.24
NIP100YPL174C YGR067CP53243 804 aa1.08□□□□□ -2.24
NIP100YPL174C DIA1P54005 336 aa1.08□□□□□ -2.24
NIP100YPL174C URC2Q04411 772 aa1.08□□□□□ -2.24
NIP100YPL174C SFM1Q12314 213 aa1.08□□□□□ -2.24
NIP100YPL174C RPS14AP06367 137 aaKnown RBP1.08□□□□□ -2.24
NIP100YPL174C IME2P32581 645 aa1.08□□□□□ -2.24
NIP100YPL174C SWE1P32944 819 aa1.08□□□□□ -2.24
NIP100YPL174C RPS14BP39516 138 aaKnown RBP1.08□□□□□ -2.24
NIP100YPL174C LCB2P40970 561 aa1.08□□□□□ -2.24
NIP100YPL174C CTK3P46963 296 aaPredicted RBP1.08□□□□□ -2.24
NIP100YPL174C ASG7P46993 209 aa1.08□□□□□ -2.24
NIP100YPL174C MEH1Q02205 184 aa1.08□□□□□ -2.24
NIP100YPL174C YDR341CQ05506 607 aaKnown RBP1.08□□□□□ -2.24
NIP100YPL174C PEX27Q08580 376 aa1.08□□□□□ -2.24
NIP100YPL174C MMT2Q08970 484 aa1.08□□□□□ -2.24
NIP100YPL174C RPL23AP0CX41 137 aaKnown RBP1.07□□□□□ -2.24
NIP100YPL174C RPL23BP0CX42 137 aaKnown RBP1.07□□□□□ -2.24
NIP100YPL174C NIP1P32497 812 aaKnown RBP1.07□□□□□ -2.24
NIP100YPL174C PCH2P38126 564 aa1.07□□□□□ -2.24
NIP100YPL174C SMP1P38128 452 aa1.07□□□□□ -2.24
NIP100YPL174C AIM23P47015 356 aa1.07□□□□□ -2.24
NIP100YPL174C COS1P53822 381 aa1.07□□□□□ -2.24
NIP100YPL174C FAR10Q06001 478 aa1.07□□□□□ -2.24
NIP100YPL174C SRN2Q99176 213 aa1.07□□□□□ -2.24
NIP100YPL174C URA10P30402 227 aa1.07□□□□□ -2.24
NIP100YPL174C ANP1P32629 500 aa1.07□□□□□ -2.24
NIP100YPL174C GGC1P38988 300 aa1.07□□□□□ -2.24
NIP100YPL174C TOS2P50078 622 aa1.07□□□□□ -2.24
NIP100YPL174C VAC7P53950 1165 aa1.07□□□□□ -2.24
NIP100YPL174C UBA3Q99344 299 aa1.07□□□□□ -2.24
NIP100YPL174C TPI1P00942 248 aaKnown RBP1.06□□□□□ -2.24
NIP100YPL174C FUS3P16892 353 aaKnown RBP1.06□□□□□ -2.24
NIP100YPL174C HEM14P40012 539 aa1.06□□□□□ -2.24
NIP100YPL174C CIN2P46670 268 aa1.06□□□□□ -2.24
NIP100YPL174C INP2Q03824 705 aa1.06□□□□□ -2.24
NIP100YPL174C API2Q04413 109 aa1.06□□□□□ -2.24
NIP100YPL174C SPE3Q12074 293 aaKnown RBP1.06□□□□□ -2.24
NIP100YPL174C ITR2P30606 609 aa1.06□□□□□ -2.24
NIP100YPL174C MOB2P43563 287 aa1.06□□□□□ -2.24
NIP100YPL174C BUD27P43573 796 aaKnown RBP RIP-Chip data1.06□□□□□ -2.24not detected
NIP100YPL174C YGR015CP53208 328 aa1.06□□□□□ -2.24
NIP100YPL174C YOL075CQ08234 1294 aa1.06□□□□□ -2.24
NIP100YPL174C HIF1Q12373 385 aa1.06□□□□□ -2.24
NIP100YPL174C YAL067W-AQ8TGK6 75 aa1.06□□□□□ -2.24
NIP100YPL174C CKA2P19454 339 aa1.05□□□□□ -2.24
NIP100YPL174C MIR1P23641 311 aaKnown RBP1.05□□□□□ -2.24
NIP100YPL174C VMA8P32610 256 aaKnown RBP1.05□□□□□ -2.24
NIP100YPL174C YPT35P38815 214 aaKnown RBP1.05□□□□□ -2.24
NIP100YPL174C TRR2P38816 342 aa1.05□□□□□ -2.24
NIP100YPL174C GDI1P39958 451 aaKnown RBP1.05□□□□□ -2.24
NIP100YPL174C LYS12P40495 371 aaKnown RBP1.05□□□□□ -2.24
NIP100YPL174C MPS2P53159 387 aa1.05□□□□□ -2.24
NIP100YPL174C HST4P53688 370 aa1.05□□□□□ -2.24
NIP100YPL174C RRB1Q04225 511 aaKnown RBP1.05□□□□□ -2.24
NIP100YPL174C YLH47Q06493 454 aa1.05□□□□□ -2.24
NIP100YPL174C IPK1Q06667 281 aa1.05□□□□□ -2.24
NIP100YPL174C GAT3Q07928 141 aa1.05□□□□□ -2.24
NIP100YPL174C UAF30Q08747 228 aa1.05□□□□□ -2.24
NIP100YPL174C APC2Q12440 853 aa1.05□□□□□ -2.24
NIP100YPL174C MNE1P24720 663 aa1.05□□□□□ -2.24
NIP100YPL174C EFM4P40516 257 aa1.05□□□□□ -2.24
NIP100YPL174C YDR114CQ04597 100 aa1.05□□□□□ -2.24
NIP100YPL174C YOR376WQ08900 122 aa1.05□□□□□ -2.24
NIP100YPL174C RNA1P11745 407 aaKnown RBP1.04□□□□□ -2.24
NIP100YPL174C RRP7P25368 297 aaPredicted RBP1.04□□□□□ -2.24
NIP100YPL174C EFB1P32471 206 aaKnown RBP1.04□□□□□ -2.24
NIP100YPL174C RAD23P32628 398 aaKnown RBP1.04□□□□□ -2.24
NIP100YPL174C PPQ1P32945 549 aa1.04□□□□□ -2.24
NIP100YPL174C PRY2P36110 329 aa1.04□□□□□ -2.24
NIP100YPL174C YJR054WP47114 497 aa1.04□□□□□ -2.24
NIP100YPL174C RRN9P53437 365 aa1.04□□□□□ -2.24
NIP100YPL174C RMI1Q02685 241 aa1.04□□□□□ -2.24
NIP100YPL174C RPN5Q12250 445 aaKnown RBP1.04□□□□□ -2.24
NIP100YPL174C YOR338WQ99326 363 aa1.04□□□□□ -2.24
NIP100YPL174C YKR015CP36111 568 aa1.04□□□□□ -2.24
NIP100YPL174C SHE3P38272 425 aaKnown RBP1.04□□□□□ -2.24
NIP100YPL174C RBG1P39729 369 aa1.04□□□□□ -2.24
NIP100YPL174C SEH1P53011 349 aaKnown RBP1.04□□□□□ -2.24
NIP100YPL174C SMP3Q04174 516 aa1.04□□□□□ -2.24
NIP100YPL174C PIN3Q06449 215 aa1.04□□□□□ -2.24
NIP100YPL174C YDL211CQ12121 372 aa1.04□□□□□ -2.24
NIP100YPL174C RPL6BP05739 176 aaKnown RBP1.03□□□□□ -2.24
NIP100YPL174C BDH1P39714 382 aa1.03□□□□□ -2.24
NIP100YPL174C RPL6AQ02326 176 aaKnown RBP1.03□□□□□ -2.24
NIP100YPL174C PAR32Q12515 295 aaKnown RBP1.03□□□□□ -2.24
NIP100YPL174C SHE1P38200 338 aa1.03□□□□□ -2.24
NIP100YPL174C CPR7P47103 393 aa1.03□□□□□ -2.24
NIP100YPL174C ABM1P47146 123 aa1.03□□□□□ -2.24
NIP100YPL174C IGO1P53897 168 aa1.03□□□□□ -2.24
NIP100YPL174C ARR1Q06596 294 aa1.03□□□□□ -2.24
Retrieved 100 of 5,963 RNA–protein pairs in 21.2 ms